RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 SMAPO00193 183 aa7.12□□□□□ -1.27
MSH6-209ENST00000538136 LRATO95237 230 aa7.12□□□□□ -1.27
MSH6-209ENST00000538136 CISD3P0C7P0 127 aa7.12□□□□□ -1.27
MSH6-209ENST00000538136 RPIAP49247 311 aa7.12□□□□□ -1.27
MSH6-209ENST00000538136 ELOCQ15369 112 aa7.12□□□□□ -1.27
MSH6-209ENST00000538136 PTCHD3Q3KNS1 767 aa7.12□□□□□ -1.27
MSH6-209ENST00000538136 PRAMEF17Q5VTA0 474 aa7.12□□□□□ -1.27
MSH6-209ENST00000538136 CCNI2Q6ZMN8 369 aaPredicted RBP7.12□□□□□ -1.27
MSH6-209ENST00000538136 TEX9Q8N6V9 391 aa7.12□□□□□ -1.27
MSH6-209ENST00000538136 CLHC1Q8NHS4 586 aa7.12□□□□□ -1.27
MSH6-209ENST00000538136 ZDHHC1Q8WTX9 485 aa7.12□□□□□ -1.27
MSH6-209ENST00000538136 STYXQ8WUJ0 223 aa7.12□□□□□ -1.27
MSH6-209ENST00000538136 EZH1Q92800 747 aaPredicted RBP7.12□□□□□ -1.27
MSH6-209ENST00000538136 PMEPA1Q969W9 287 aa7.12□□□□□ -1.27
MSH6-209ENST00000538136 NXNL1Q96CM4 212 aa7.12□□□□□ -1.27
MSH6-209ENST00000538136 PRAP1Q96NZ9 151 aa7.12□□□□□ -1.27
MSH6-209ENST00000538136 TMEM9BQ9NQ34 198 aa7.12□□□□□ -1.27
MSH6-209ENST00000538136 WSB2Q9NYS7 404 aaPredicted RBP7.12□□□□□ -1.27
MSH6-209ENST00000538136 PADI4Q9UM07 663 aa7.12□□□□□ -1.27
MSH6-209ENST00000538136 BTRCQ9Y297 605 aa7.12□□□□□ -1.27
MSH6-209ENST00000538136 DYRK1BQ9Y463 629 aa7.12□□□□□ -1.27
MSH6-209ENST00000538136 TIMM22Q9Y584 194 aa7.12□□□□□ -1.27
MSH6-209ENST00000538136 REV3LO60673 3130 aa7.12□□□□□ -1.27
MSH6-209ENST00000538136 NAV3Q8IVL0 2385 aa7.12□□□□□ -1.27
MSH6-209ENST00000538136 PSMD12O00232 456 aaPredicted RBP7.12□□□□□ -1.27
MSH6-209ENST00000538136 ITGB7P26010 798 aa7.12□□□□□ -1.27
MSH6-209ENST00000538136 PTGER1P34995 402 aa7.12□□□□□ -1.27
MSH6-209ENST00000538136 GP5P40197 560 aa7.12□□□□□ -1.27
MSH6-209ENST00000538136 OR1D5P58170 312 aa7.12□□□□□ -1.27
MSH6-209ENST00000538136 GRIK2Q13002 908 aa7.12□□□□□ -1.27
MSH6-209ENST00000538136 CDC16Q13042 620 aa7.12□□□□□ -1.27
MSH6-209ENST00000538136 TUBB2AQ13885 445 aa7.12□□□□□ -1.27
MSH6-209ENST00000538136 SLC36A4Q6YBV0 504 aa7.12□□□□□ -1.27
MSH6-209ENST00000538136 LONP2Q86WA8 852 aa7.12□□□□□ -1.27
MSH6-209ENST00000538136 SYT12Q8IV01 421 aa7.12□□□□□ -1.27
MSH6-209ENST00000538136 MIER2Q8N344 545 aa7.12□□□□□ -1.27
MSH6-209ENST00000538136 OR5AR1Q8NGP9 310 aa7.12□□□□□ -1.27
MSH6-209ENST00000538136 ARRDC2Q8TBH0 407 aa7.12□□□□□ -1.27
MSH6-209ENST00000538136 EEF1AKMT1Q8WVE0 214 aa7.12□□□□□ -1.27
MSH6-209ENST00000538136 PGAP3Q96FM1 320 aaPredicted RBP7.12□□□□□ -1.27
MSH6-209ENST00000538136 CALR3Q96L12 384 aaKnown RBP7.12□□□□□ -1.27
MSH6-209ENST00000538136 ZNF641Q96N77 438 aaPredicted RBP7.12□□□□□ -1.27
MSH6-209ENST00000538136 FCRL4Q96PJ5 515 aa7.12□□□□□ -1.27
MSH6-209ENST00000538136 PRMT1Q99873 361 aaKnown RBP7.12□□□□□ -1.27
MSH6-209ENST00000538136 TUBB2BQ9BVA1 445 aa7.12□□□□□ -1.27
MSH6-209ENST00000538136 GSDMCQ9BYG8 508 aa7.12□□□□□ -1.27
MSH6-209ENST00000538136 DRC3Q9H069 523 aa7.12□□□□□ -1.27
MSH6-209ENST00000538136 SLC6A14Q9UN76 642 aa7.12□□□□□ -1.27
MSH6-209ENST00000538136 BPTFQ12830 3046 aa7.12□□□□□ -1.27
MSH6-209ENST00000538136 IGHV1OR15-9A0A0B4J2B8 117 aa7.11□□□□□ -1.27
MSH6-209ENST00000538136 CDC7O00311 574 aa7.11□□□□□ -1.27
MSH6-209ENST00000538136 OR1F1O43749 312 aa7.11□□□□□ -1.27
MSH6-209ENST00000538136 LCA5LO95447 670 aa7.11□□□□□ -1.27
MSH6-209ENST00000538136 FTH1P02794 183 aa7.11□□□□□ -1.27
MSH6-209ENST00000538136 SP9P0CG40 484 aa7.11□□□□□ -1.27
MSH6-209ENST00000538136 ATP1B2P14415 290 aaPredicted RBP7.11□□□□□ -1.27
MSH6-209ENST00000538136 SKOR1P84550 965 aa7.11□□□□□ -1.27
MSH6-209ENST00000538136 CDK3Q00526 305 aa7.11□□□□□ -1.27
MSH6-209ENST00000538136 RFTN1Q14699 578 aaPredicted RBP7.11□□□□□ -1.27
MSH6-209ENST00000538136 DBN1Q16643 649 aa7.11□□□□□ -1.27
MSH6-209ENST00000538136 ZNF423Q2M1K9 1284 aa7.11□□□□□ -1.27
MSH6-209ENST00000538136 XKR6Q5GH73 641 aa7.11□□□□□ -1.27
MSH6-209ENST00000538136 N4BP2L1Q5TBK1 243 aaPredicted RBP7.11□□□□□ -1.27
MSH6-209ENST00000538136 PDPK2PQ6A1A2 396 aa7.11□□□□□ -1.27
MSH6-209ENST00000538136 CEP128Q6ZU80 1094 aa7.11□□□□□ -1.27
MSH6-209ENST00000538136 IFNEQ86WN2 208 aa7.11□□□□□ -1.27
MSH6-209ENST00000538136 WDR48Q8TAF3 677 aa7.11□□□□□ -1.27
MSH6-209ENST00000538136 FAM76AQ8TAV0 307 aa7.11□□□□□ -1.27
MSH6-209ENST00000538136 GLMNQ92990 594 aa7.11□□□□□ -1.27
MSH6-209ENST00000538136 NT5C3BQ969T7 300 aa7.11□□□□□ -1.27
MSH6-209ENST00000538136 FAR2Q96K12 515 aa7.11□□□□□ -1.27
MSH6-209ENST00000538136 FCRL3Q96P31 734 aaPredicted RBP7.11□□□□□ -1.27
MSH6-209ENST00000538136 FAM167BQ9BTA0 163 aa7.11□□□□□ -1.27
MSH6-209ENST00000538136 ZSCAN32Q9NX65 697 aa7.11□□□□□ -1.27
MSH6-209ENST00000538136 GNPTGQ9UJJ9 305 aa7.11□□□□□ -1.27
MSH6-209ENST00000538136 ARIH1Q9Y4X5 557 aaPredicted RBP7.11□□□□□ -1.27
MSH6-209ENST00000538136 LCTP09848 1927 aa7.11□□□□□ -1.27
MSH6-209ENST00000538136 AQP9O43315 295 aa7.11□□□□□ -1.27
MSH6-209ENST00000538136 KIF1CO43896 1103 aaKnown RBP7.11□□□□□ -1.27
MSH6-209ENST00000538136 OXTRP30559 389 aa7.11□□□□□ -1.27
MSH6-209ENST00000538136 GRIA4P48058 902 aa7.11□□□□□ -1.27
MSH6-209ENST00000538136 HCAR3P49019 387 aa7.11□□□□□ -1.27
MSH6-209ENST00000538136 CASP9P55211 416 aa7.11□□□□□ -1.27
MSH6-209ENST00000538136 PTSQ03393 145 aa7.11□□□□□ -1.27
MSH6-209ENST00000538136 CACNG1Q06432 222 aa7.11□□□□□ -1.27
MSH6-209ENST00000538136 PTK2BQ14289 1009 aa7.11□□□□□ -1.27
MSH6-209ENST00000538136 KCNAB1Q14722 419 aa7.11□□□□□ -1.27
MSH6-209ENST00000538136 PCBP2Q15366 365 aaKnown RBP eCLIP7.11□□□□□ -1.274e-9■■■■■ 31
MSH6-209ENST00000538136 TAF1AQ15573 450 aaPredicted RBP7.11□□□□□ -1.27
MSH6-209ENST00000538136 OASLQ15646 514 aaKnown RBP7.11□□□□□ -1.27
MSH6-209ENST00000538136 HECTD2Q5U5R9 776 aa7.11□□□□□ -1.27
MSH6-209ENST00000538136 GPR65Q8IYL9 337 aa7.11□□□□□ -1.27
MSH6-209ENST00000538136 FBXO39Q8N4B4 442 aa7.11□□□□□ -1.27
MSH6-209ENST00000538136 PTGR2Q8N8N7 351 aaPredicted RBP7.11□□□□□ -1.27
MSH6-209ENST00000538136 ZIM3Q96PE6 472 aa7.11□□□□□ -1.27
MSH6-209ENST00000538136 ELOVL6Q9H5J4 265 aa7.11□□□□□ -1.27
MSH6-209ENST00000538136 SH3BP4Q9P0V3 963 aa7.11□□□□□ -1.27
MSH6-209ENST00000538136 LAMA1P25391 3075 aa7.11□□□□□ -1.27
MSH6-209ENST00000538136 LOC100653049A0A140TA62 436 aa7.11□□□□□ -1.27
MSH6-209ENST00000538136 GLOD5A6NK44 160 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms