RNA–Protein interactions for RNA: ENST00000536011.5

RTN3-207, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-207ENST00000536011 TJP3O95049 919 aa12.85□□□□□ -0.35
RTN3-207ENST00000536011 NDUFA10O95299 355 aa12.85□□□□□ -0.35
RTN3-207ENST00000536011 PTMAP06454 111 aaKnown RBP12.85□□□□□ -0.35
RTN3-207ENST00000536011 SLC35G4P0C7Q5 338 aa12.85□□□□□ -0.35
RTN3-207ENST00000536011 FGF5P12034 268 aa12.85□□□□□ -0.35
RTN3-207ENST00000536011 NELFEP18615 380 aaKnown RBP12.85□□□□□ -0.35
RTN3-207ENST00000536011 UGT1A6P19224 532 aa12.85□□□□□ -0.35
RTN3-207ENST00000536011 UGT1A1P22309 533 aa12.85□□□□□ -0.35
RTN3-207ENST00000536011 UGT1A4P22310 534 aa12.85□□□□□ -0.35
RTN3-207ENST00000536011 RBL1P28749 1068 aa12.85□□□□□ -0.35
RTN3-207ENST00000536011 ARL4DP49703 201 aa12.85□□□□□ -0.35
RTN3-207ENST00000536011 CTSCP53634 463 aa12.85□□□□□ -0.35
RTN3-207ENST00000536011 RWDD2BP57060 319 aa12.85□□□□□ -0.35
RTN3-207ENST00000536011 EIF3EP60228 445 aaKnown RBP12.85□□□□□ -0.35
RTN3-207ENST00000536011 OTUD4Q01804 1114 aaKnown RBP12.85□□□□□ -0.35
RTN3-207ENST00000536011 RPE65Q16518 533 aa12.85□□□□□ -0.35
RTN3-207ENST00000536011 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.85□□□□□ -0.35
RTN3-207ENST00000536011 FNBP1LQ5T0N5 605 aa12.85□□□□□ -0.35
RTN3-207ENST00000536011 METRNLQ641Q3 311 aa12.85□□□□□ -0.35
RTN3-207ENST00000536011 TIPARPQ7Z3E1 657 aaKnown RBP12.85□□□□□ -0.35
RTN3-207ENST00000536011 BPHLQ86WA6 291 aaPredicted RBP12.85□□□□□ -0.35
RTN3-207ENST00000536011 KMT5CQ86Y97 462 aa12.85□□□□□ -0.35
RTN3-207ENST00000536011 TMTC1Q8IUR5 882 aa12.85□□□□□ -0.35
RTN3-207ENST00000536011 UNC5BQ8IZJ1 945 aa12.85□□□□□ -0.35
RTN3-207ENST00000536011 CARFQ8N187 725 aa12.85□□□□□ -0.35
RTN3-207ENST00000536011 TXLNBQ8N3L3 684 aa12.85□□□□□ -0.35
RTN3-207ENST00000536011 SIDT2Q8NBJ9 832 aaKnown RBP12.85□□□□□ -0.35
RTN3-207ENST00000536011 C9orf43Q8TAL5 461 aaPredicted RBP12.85□□□□□ -0.35
RTN3-207ENST00000536011 ACTL9Q8TC94 416 aa12.85□□□□□ -0.35
RTN3-207ENST00000536011 HEXDCQ8WVB3 486 aa12.85□□□□□ -0.35
RTN3-207ENST00000536011 ULK4Q96C45 1275 aa12.85□□□□□ -0.35
RTN3-207ENST00000536011 OSBPL8Q9BZF1 889 aa12.85□□□□□ -0.35
RTN3-207ENST00000536011 UGT1A7Q9HAW7 530 aa12.85□□□□□ -0.35
RTN3-207ENST00000536011 UGT1A10Q9HAW8 530 aa12.85□□□□□ -0.35
RTN3-207ENST00000536011 UGT1A8Q9HAW9 530 aa12.85□□□□□ -0.35
RTN3-207ENST00000536011 IMP3Q9NV31 184 aaKnown RBP12.85□□□□□ -0.35
RTN3-207ENST00000536011 LNPEPQ9UIQ6 1025 aa12.85□□□□□ -0.35
RTN3-207ENST00000536011 WDR37Q9Y2I8 494 aa12.85□□□□□ -0.35
RTN3-207ENST00000536011 KCTD3Q9Y597 815 aa12.85□□□□□ -0.35
RTN3-207ENST00000536011 ARL5AQ9Y689 179 aa12.85□□□□□ -0.35
RTN3-207ENST00000536011 EPN1Q9Y6I3 576 aaPredicted RBP12.85□□□□□ -0.35
RTN3-207ENST00000536011 UBR5O95071 2799 aaPredicted RBP12.85□□□□□ -0.35
RTN3-207ENST00000536011 GOLGA6L9A6NEM1 432 aa12.84□□□□□ -0.35
RTN3-207ENST00000536011 GOLGA6L3A6NEY3 463 aa12.84□□□□□ -0.35
RTN3-207ENST00000536011 MGAT4DA6NG13 374 aa12.84□□□□□ -0.35
RTN3-207ENST00000536011 TLCD2A6NGC4 264 aa12.84□□□□□ -0.35
RTN3-207ENST00000536011 BTNL10A8MVZ5 291 aa12.84□□□□□ -0.35
RTN3-207ENST00000536011 NKX2-8O15522 239 aa12.84□□□□□ -0.35
RTN3-207ENST00000536011 KCNN4O15554 427 aa12.84□□□□□ -0.35
RTN3-207ENST00000536011 BUD23O43709 281 aaKnown RBP12.84□□□□□ -0.35
RTN3-207ENST00000536011 SRP72O76094 671 aaKnown RBP12.84□□□□□ -0.35
RTN3-207ENST00000536011 KIAA0754O94854 1291 aa12.84□□□□□ -0.35
RTN3-207ENST00000536011 AGTP01019 485 aa12.84□□□□□ -0.35
RTN3-207ENST00000536011 RBP3P10745 1247 aa12.84□□□□□ -0.35
RTN3-207ENST00000536011 MTHFD1P11586 935 aaKnown RBP12.84□□□□□ -0.35
RTN3-207ENST00000536011 ITGALP20701 1170 aa12.84□□□□□ -0.35
RTN3-207ENST00000536011 NDUFS1P28331 727 aa12.84□□□□□ -0.35
RTN3-207ENST00000536011 PBLDP30039 288 aaPredicted RBP12.84□□□□□ -0.35
RTN3-207ENST00000536011 DLSTP36957 453 aa12.84□□□□□ -0.35
RTN3-207ENST00000536011 HADHAP40939 763 aa12.84□□□□□ -0.35
RTN3-207ENST00000536011 SH3BP2P78314 561 aa12.84□□□□□ -0.35
RTN3-207ENST00000536011 ACY1Q03154 408 aa12.84□□□□□ -0.35
RTN3-207ENST00000536011 TUBB3Q13509 450 aa12.84□□□□□ -0.35
RTN3-207ENST00000536011 NFE2L1Q14494 772 aa12.84□□□□□ -0.35
RTN3-207ENST00000536011 BCL7AQ4VC05 210 aa12.84□□□□□ -0.35
RTN3-207ENST00000536011 DNTTIP2Q5QJE6 756 aaKnown RBP12.84□□□□□ -0.35
RTN3-207ENST00000536011 ANKRD20A2Q5SQ80 823 aa12.84□□□□□ -0.35
RTN3-207ENST00000536011 ANKRD20A1Q5TYW2 823 aa12.84□□□□□ -0.35
RTN3-207ENST00000536011 ANKRD20A3Q5VUR7 823 aa12.84□□□□□ -0.35
RTN3-207ENST00000536011 ARMC6Q6NXE6 501 aa12.84□□□□□ -0.35
RTN3-207ENST00000536011 DARS2Q6PI48 645 aaKnown RBP12.84□□□□□ -0.35
RTN3-207ENST00000536011 RANBP10Q6VN20 620 aa12.84□□□□□ -0.35
RTN3-207ENST00000536011 OOSP2Q86WS3 158 aa12.84□□□□□ -0.35
RTN3-207ENST00000536011 OR4K2Q8NGD2 314 aa12.84□□□□□ -0.35
RTN3-207ENST00000536011 OR2L2Q8NH16 312 aa12.84□□□□□ -0.35
RTN3-207ENST00000536011 SEC14L1Q92503 715 aa12.84□□□□□ -0.35
RTN3-207ENST00000536011 MRFAP1L1Q96HT8 127 aa12.84□□□□□ -0.35
RTN3-207ENST00000536011 SLC41A2Q96JW4 573 aa12.84□□□□□ -0.35
RTN3-207ENST00000536011 FCRL4Q96PJ5 515 aa12.84□□□□□ -0.35
RTN3-207ENST00000536011 ASB8Q9H765 288 aa12.84□□□□□ -0.35
RTN3-207ENST00000536011 VPS37BQ9H9H4 285 aa12.84□□□□□ -0.35
RTN3-207ENST00000536011 SEMA5BQ9P283 1151 aa12.84□□□□□ -0.35
RTN3-207ENST00000536011 IL17BQ9UHF5 180 aa12.84□□□□□ -0.35
RTN3-207ENST00000536011 CRLS1Q9UJA2 301 aa12.84□□□□□ -0.35
RTN3-207ENST00000536011 RARRES3Q9UL19 164 aa12.84□□□□□ -0.35
RTN3-207ENST00000536011 PSMD13Q9UNM6 376 aa12.84□□□□□ -0.35
RTN3-207ENST00000536011 HEBP2Q9Y5Z4 205 aa12.84□□□□□ -0.35
RTN3-207ENST00000536011 COLEC10Q9Y6Z7 277 aa12.84□□□□□ -0.35
RTN3-207ENST00000536011 UBA6A0AVT1 1052 aaPredicted RBP12.83□□□□□ -0.36
RTN3-207ENST00000536011 GAPDHSO14556 408 aaPredicted RBP12.83□□□□□ -0.36
RTN3-207ENST00000536011 TERTO14746 1132 aaKnown RBP12.83□□□□□ -0.36
RTN3-207ENST00000536011 GPR39O43194 453 aa12.83□□□□□ -0.36
RTN3-207ENST00000536011 KIF1CO43896 1103 aaKnown RBP12.83□□□□□ -0.36
RTN3-207ENST00000536011 SPAG6O75602 509 aa12.83□□□□□ -0.36
RTN3-207ENST00000536011 PSMB4P28070 264 aa12.83□□□□□ -0.36
RTN3-207ENST00000536011 ADRA1AP35348 466 aa12.83□□□□□ -0.36
RTN3-207ENST00000536011 KRT33BQ14525 404 aa12.83□□□□□ -0.36
RTN3-207ENST00000536011 DEFB109BQ30KR1 87 aa12.83□□□□□ -0.36
RTN3-207ENST00000536011 C16orf46Q6P387 395 aa12.83□□□□□ -0.36
RTN3-207ENST00000536011 ZNF449Q6P9G9 518 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms