RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 UBA6A0AVT1 1052 aaPredicted RBP12.31□□□□□ -0.44
COPB1-208ENST00000532088 H3BM21 787 aa12.31□□□□□ -0.44
COPB1-208ENST00000532088 KPNA5O15131 536 aa12.31□□□□□ -0.44
COPB1-208ENST00000532088 OR1I1O60431 355 aa12.31□□□□□ -0.44
COPB1-208ENST00000532088 FOXD2O60548 495 aaPredicted RBP12.31□□□□□ -0.44
COPB1-208ENST00000532088 LMNAP02545 664 aaKnown RBP12.31□□□□□ -0.44
COPB1-208ENST00000532088 INHBAP08476 426 aa12.31□□□□□ -0.44
COPB1-208ENST00000532088 NME1P15531 152 aaKnown RBP12.31□□□□□ -0.44
COPB1-208ENST00000532088 MSH2P43246 934 aa12.31□□□□□ -0.44
COPB1-208ENST00000532088 CSNK1EP49674 416 aaKnown RBP12.31□□□□□ -0.44
COPB1-208ENST00000532088 HK3P52790 923 aa12.31□□□□□ -0.44
COPB1-208ENST00000532088 PLOD1Q02809 727 aaPredicted RBP12.31□□□□□ -0.44
COPB1-208ENST00000532088 DMPKQ09013 629 aa12.31□□□□□ -0.44
COPB1-208ENST00000532088 DNAJC3Q13217 504 aa12.31□□□□□ -0.44
COPB1-208ENST00000532088 ZNF423Q2M1K9 1284 aa12.31□□□□□ -0.44
COPB1-208ENST00000532088 ALG11Q2TAA5 492 aa12.31□□□□□ -0.44
COPB1-208ENST00000532088 ZNF789Q5FWF6 425 aa12.31□□□□□ -0.44
COPB1-208ENST00000532088 UGT3A1Q6NUS8 523 aa12.31□□□□□ -0.44
COPB1-208ENST00000532088 TMEM220Q6QAJ8 160 aa12.31□□□□□ -0.44
COPB1-208ENST00000532088 LRIG3Q6UXM1 1119 aa12.31□□□□□ -0.44
COPB1-208ENST00000532088 KDM7AQ6ZMT4 941 aa12.31□□□□□ -0.44
COPB1-208ENST00000532088 CROCCP2Q86T23 111 aa12.31□□□□□ -0.44
COPB1-208ENST00000532088 ZNF547Q8IVP9 402 aa12.31□□□□□ -0.44
COPB1-208ENST00000532088 IQCKQ8N0W5 287 aa12.31□□□□□ -0.44
COPB1-208ENST00000532088 OR1E3Q8WZA6 343 aa12.31□□□□□ -0.44
COPB1-208ENST00000532088 PDXPQ96GD0 296 aa12.31□□□□□ -0.44
COPB1-208ENST00000532088 OR2M4Q96R27 311 aa12.31□□□□□ -0.44
COPB1-208ENST00000532088 PAFAH2Q99487 392 aa12.31□□□□□ -0.44
COPB1-208ENST00000532088 GPR22Q99680 433 aa12.31□□□□□ -0.44
COPB1-208ENST00000532088 NUSAP1Q9BXS6 441 aaKnown RBP12.31□□□□□ -0.44
COPB1-208ENST00000532088 POPDC3Q9HBV1 291 aa12.31□□□□□ -0.44
COPB1-208ENST00000532088 SUFUQ9UMX1 484 aa12.31□□□□□ -0.44
COPB1-208ENST00000532088 TMEM98Q9Y2Y6 226 aa12.31□□□□□ -0.44
COPB1-208ENST00000532088 PSAT1Q9Y617 370 aa12.31□□□□□ -0.44
COPB1-208ENST00000532088 IKBKGQ9Y6K9 419 aa12.31□□□□□ -0.44
COPB1-208ENST00000532088 CUL9Q8IWT3 2517 aa12.31□□□□□ -0.44
COPB1-208ENST00000532088 A0A1B0GVT2 93 aa12.3□□□□□ -0.44
COPB1-208ENST00000532088 KHNYNO15037 678 aaKnown RBP12.3□□□□□ -0.44
COPB1-208ENST00000532088 VCLP18206 1134 aa12.3□□□□□ -0.44
COPB1-208ENST00000532088 SKIV2L2P42285 1042 aaKnown RBP12.3□□□□□ -0.44
COPB1-208ENST00000532088 CTSCP53634 463 aa12.3□□□□□ -0.44
COPB1-208ENST00000532088 HNRNPKP61978 463 aaKnown RBP eCLIP12.3□□□□□ -0.44
COPB1-208ENST00000532088 POU4F1Q01851 419 aa12.3□□□□□ -0.44
COPB1-208ENST00000532088 BNC1Q01954 994 aa12.3□□□□□ -0.44
COPB1-208ENST00000532088 GRIK2Q13002 908 aa12.3□□□□□ -0.44
COPB1-208ENST00000532088 EFTUD2Q15029 972 aaKnown RBP eCLIP12.3□□□□□ -0.44
COPB1-208ENST00000532088 SMAD1Q15797 465 aaKnown RBP12.3□□□□□ -0.44
COPB1-208ENST00000532088 KIF19Q2TAC6 998 aa12.3□□□□□ -0.44
COPB1-208ENST00000532088 TRIM61Q5EBN2 209 aa12.3□□□□□ -0.44
COPB1-208ENST00000532088 CTSL3PQ5NE16 218 aa12.3□□□□□ -0.44
COPB1-208ENST00000532088 ZNF648Q5T619 568 aaPredicted RBP12.3□□□□□ -0.44
COPB1-208ENST00000532088 LGSNQ5TDP6 509 aa12.3□□□□□ -0.44
COPB1-208ENST00000532088 PTRHD1Q6GMV3 140 aaKnown RBP12.3□□□□□ -0.44
COPB1-208ENST00000532088 ZNF549Q6P9A3 640 aa12.3□□□□□ -0.44
COPB1-208ENST00000532088 CNSTQ6PJW8 725 aa12.3□□□□□ -0.44
COPB1-208ENST00000532088 DOK6Q6PKX4 331 aa12.3□□□□□ -0.44
COPB1-208ENST00000532088 MICALCLQ6ZW33 695 aa12.3□□□□□ -0.44
COPB1-208ENST00000532088 CCDC91Q7Z6B0 441 aa12.3□□□□□ -0.44
COPB1-208ENST00000532088 C11orf96Q7Z7L8 435 aa12.3□□□□□ -0.44
COPB1-208ENST00000532088 TRAPPC5Q8IUR0 188 aa12.3□□□□□ -0.44
COPB1-208ENST00000532088 PHACTR4Q8IZ21 702 aa12.3□□□□□ -0.44
COPB1-208ENST00000532088 FSTL5Q8N475 847 aaPredicted RBP12.3□□□□□ -0.44
COPB1-208ENST00000532088 OR2L2Q8NH16 312 aa12.3□□□□□ -0.44
COPB1-208ENST00000532088 HM13Q8TCT9 377 aa12.3□□□□□ -0.44
COPB1-208ENST00000532088 DCAKDQ8WVC6 231 aa12.3□□□□□ -0.44
COPB1-208ENST00000532088 MTBPQ96DY7 904 aa12.3□□□□□ -0.44
COPB1-208ENST00000532088 SGF29Q96ES7 293 aa12.3□□□□□ -0.44
COPB1-208ENST00000532088 VPS39Q96JC1 886 aa12.3□□□□□ -0.44
COPB1-208ENST00000532088 ELF4Q99607 663 aaPredicted RBP12.3□□□□□ -0.44
COPB1-208ENST00000532088 CCM2Q9BSQ5 444 aa12.3□□□□□ -0.44
COPB1-208ENST00000532088 ARRDC1-AS1Q9H2J1 176 aa12.3□□□□□ -0.44
COPB1-208ENST00000532088 CARS2Q9HA77 564 aaKnown RBP12.3□□□□□ -0.44
COPB1-208ENST00000532088 CYP4F12Q9HCS2 524 aa12.3□□□□□ -0.44
COPB1-208ENST00000532088 SPATS2LQ9NUQ6 558 aaKnown RBP12.3□□□□□ -0.44
COPB1-208ENST00000532088 TAS2R13Q9NYV9 303 aa12.3□□□□□ -0.44
COPB1-208ENST00000532088 SLC17A6Q9P2U8 582 aa12.3□□□□□ -0.44
COPB1-208ENST00000532088 CRYL1Q9Y2S2 319 aa12.3□□□□□ -0.44
COPB1-208ENST00000532088 PRSS21Q9Y6M0 314 aa12.3□□□□□ -0.44
COPB1-208ENST00000532088 LRP4O75096 1905 aa12.3□□□□□ -0.44
COPB1-208ENST00000532088 CACNA1HO95180 2353 aa12.29□□□□□ -0.44
COPB1-208ENST00000532088 PCDH15Q96QU1 1955 aa12.29□□□□□ -0.44
COPB1-208ENST00000532088 MGAT4DA6NG13 374 aa12.29□□□□□ -0.44
COPB1-208ENST00000532088 PRR19A6NJB7 356 aa12.29□□□□□ -0.44
COPB1-208ENST00000532088 OR2AG2A6NM03 316 aa12.29□□□□□ -0.44
COPB1-208ENST00000532088 EIF3FO00303 357 aaPredicted RBP12.29□□□□□ -0.44
COPB1-208ENST00000532088 LIN7AO14910 233 aaPredicted RBP12.29□□□□□ -0.44
COPB1-208ENST00000532088 CDH16O75309 829 aa12.29□□□□□ -0.44
COPB1-208ENST00000532088 VPS26AO75436 327 aa12.29□□□□□ -0.44
COPB1-208ENST00000532088 KRT38O76015 456 aa12.29□□□□□ -0.44
COPB1-208ENST00000532088 CER1O95813 267 aa12.29□□□□□ -0.44
COPB1-208ENST00000532088 FUCA1P04066 466 aa12.29□□□□□ -0.44
COPB1-208ENST00000532088 SHBGP04278 402 aa12.29□□□□□ -0.44
COPB1-208ENST00000532088 ITGA2BP08514 1039 aa12.29□□□□□ -0.44
COPB1-208ENST00000532088 ZNF806P0C7X5 589 aa12.29□□□□□ -0.44
COPB1-208ENST00000532088 GCAP28676 217 aa12.29□□□□□ -0.44
COPB1-208ENST00000532088 FMO4P31512 558 aa12.29□□□□□ -0.44
COPB1-208ENST00000532088 GNPDA1P46926 289 aa12.29□□□□□ -0.44
COPB1-208ENST00000532088 ARRB1P49407 418 aaPredicted RBP12.29□□□□□ -0.44
COPB1-208ENST00000532088 EPHA4P54764 986 aa12.29□□□□□ -0.44
COPB1-208ENST00000532088 RPA4Q13156 261 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms