RNA–Protein interactions for RNA: ENST00000528062.7

RBM39-243, Transcript of RNA binding motif protein 39, humanhuman

TSL 1 (best) BASIC

Gene RBM39, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-243ENST00000528062 MARCH2Q9P0N8 246 aa12.86□□□□□ -0.35
RBM39-243ENST00000528062 IKZF3Q9UKT9 509 aa12.86□□□□□ -0.35
RBM39-243ENST00000528062 RNF103-CHMP3A0A140T963 221 aa12.86□□□□□ -0.35
RBM39-243ENST00000528062 MBTPS2O43462 519 aa12.86□□□□□ -0.35
RBM39-243ENST00000528062 RASAL1O95294 804 aa12.86□□□□□ -0.35
RBM39-243ENST00000528062 MATN4O95460 622 aa12.86□□□□□ -0.35
RBM39-243ENST00000528062 FGF19O95750 216 aa12.86□□□□□ -0.35
RBM39-243ENST00000528062 PRSS56P0CW18 603 aa12.86□□□□□ -0.35
RBM39-243ENST00000528062 IL10P22301 178 aa12.86□□□□□ -0.35
RBM39-243ENST00000528062 CES1P23141 567 aa12.86□□□□□ -0.35
RBM39-243ENST00000528062 ATP5C1P36542 298 aaKnown RBP12.86□□□□□ -0.35
RBM39-243ENST00000528062 TFF2Q03403 129 aa12.86□□□□□ -0.35
RBM39-243ENST00000528062 TNK2Q07912 1038 aa12.86□□□□□ -0.35
RBM39-243ENST00000528062 BNIP2Q12982 314 aa12.86□□□□□ -0.35
RBM39-243ENST00000528062 PMS2P3Q13401 168 aa12.86□□□□□ -0.35
RBM39-243ENST00000528062 ALFQ53S48 1182 aa12.86□□□□□ -0.35
RBM39-243ENST00000528062 ATAT1Q5SQI0 421 aa12.86□□□□□ -0.35
RBM39-243ENST00000528062 CES5AQ6NT32 575 aa12.86□□□□□ -0.35
RBM39-243ENST00000528062 PRMT9Q6P2P2 845 aa12.86□□□□□ -0.35
RBM39-243ENST00000528062 BLOC1S3Q6QNY0 202 aa12.86□□□□□ -0.35
RBM39-243ENST00000528062 IFNEQ86WN2 208 aa12.86□□□□□ -0.35
RBM39-243ENST00000528062 ZNF683Q8IZ20 524 aa12.86□□□□□ -0.35
RBM39-243ENST00000528062 CMTM8Q8IZV2 173 aa12.86□□□□□ -0.35
RBM39-243ENST00000528062 BBS5Q8N3I7 341 aa12.86□□□□□ -0.35
RBM39-243ENST00000528062 ARRDC2Q8TBH0 407 aa12.86□□□□□ -0.35
RBM39-243ENST00000528062 LZICQ8WZA0 190 aa12.86□□□□□ -0.35
RBM39-243ENST00000528062 TMEM125Q96AQ2 219 aa12.86□□□□□ -0.35
RBM39-243ENST00000528062 TUBGCP3Q96CW5 907 aa12.86□□□□□ -0.35
RBM39-243ENST00000528062 RSPRY1Q96DX4 576 aa12.86□□□□□ -0.35
RBM39-243ENST00000528062 SLC39A13Q96H72 371 aa12.86□□□□□ -0.35
RBM39-243ENST00000528062 LRRC3BQ96PB8 259 aa12.86□□□□□ -0.35
RBM39-243ENST00000528062 ATOH8Q96SQ7 321 aa12.86□□□□□ -0.35
RBM39-243ENST00000528062 KLF16Q9BXK1 252 aaPredicted RBP12.86□□□□□ -0.35
RBM39-243ENST00000528062 OSBPL6Q9BZF3 934 aa12.86□□□□□ -0.35
RBM39-243ENST00000528062 SMPD4Q9NXE4 827 aa12.86□□□□□ -0.35
RBM39-243ENST00000528062 USP22Q9UPT9 525 aa12.86□□□□□ -0.35
RBM39-243ENST00000528062 ARL5AQ9Y689 179 aa12.86□□□□□ -0.35
RBM39-243ENST00000528062 COL4A3Q01955 1670 aa12.85□□□□□ -0.35
RBM39-243ENST00000528062 TCRBV5S2A0A599 114 aa12.85□□□□□ -0.35
RBM39-243ENST00000528062 ZNF197O14709 1029 aa12.85□□□□□ -0.35
RBM39-243ENST00000528062 INPP4BO15327 924 aa12.85□□□□□ -0.35
RBM39-243ENST00000528062 GOT2P00505 430 aaKnown RBP12.85□□□□□ -0.35
RBM39-243ENST00000528062 MT-ND1P03886 318 aa12.85□□□□□ -0.35
RBM39-243ENST00000528062 ZNF37AP17032 561 aaPredicted RBP12.85□□□□□ -0.35
RBM39-243ENST00000528062 ZFP36L2P47974 494 aaKnown RBP12.85□□□□□ -0.35
RBM39-243ENST00000528062 GSK3BP49841 420 aa12.85□□□□□ -0.35
RBM39-243ENST00000528062 RENBPP51606 427 aa12.85□□□□□ -0.35
RBM39-243ENST00000528062 KCNQ1P51787 676 aa12.85□□□□□ -0.35
RBM39-243ENST00000528062 SLC7A9P82251 487 aa12.85□□□□□ -0.35
RBM39-243ENST00000528062 CYP51A1Q16850 503 aa12.85□□□□□ -0.35
RBM39-243ENST00000528062 ANKDD1AQ495B1 522 aa12.85□□□□□ -0.35
RBM39-243ENST00000528062 MARC1Q5VT66 337 aa12.85□□□□□ -0.35
RBM39-243ENST00000528062 UMODL1-AS1Q8N2C9 162 aa12.85□□□□□ -0.35
RBM39-243ENST00000528062 TRPV3Q8NET8 790 aa12.85□□□□□ -0.35
RBM39-243ENST00000528062 TNIP2Q8NFZ5 429 aa12.85□□□□□ -0.35
RBM39-243ENST00000528062 MAFAQ8NHW3 353 aaPredicted RBP12.85□□□□□ -0.35
RBM39-243ENST00000528062 DNAJB14Q8TBM8 379 aa12.85□□□□□ -0.35
RBM39-243ENST00000528062 SNRNP27Q8WVK2 155 aaKnown RBP12.85□□□□□ -0.35
RBM39-243ENST00000528062 HLA-CQ95604 372 aa12.85□□□□□ -0.35
RBM39-243ENST00000528062 C9orf16Q9BUW7 83 aa12.85□□□□□ -0.35
RBM39-243ENST00000528062 TRIM15Q9C019 465 aa12.85□□□□□ -0.35
RBM39-243ENST00000528062 SLAMF8Q9P0V8 285 aa12.85□□□□□ -0.35
RBM39-243ENST00000528062 DNMT3LQ9UJW3 386 aa12.85□□□□□ -0.35
RBM39-243ENST00000528062 PTBP2Q9UKA9 531 aaKnown RBP12.85□□□□□ -0.35
RBM39-243ENST00000528062 GPR45Q9Y5Y3 372 aa12.85□□□□□ -0.35
RBM39-243ENST00000528062 CPQQ9Y646 472 aa12.85□□□□□ -0.35
RBM39-243ENST00000528062 OAS3Q9Y6K5 1087 aaKnown RBP12.85□□□□□ -0.35
RBM39-243ENST00000528062 MYOFQ9NZM1 2061 aa12.85□□□□□ -0.35
RBM39-243ENST00000528062 WASH4PA8MWX3 477 aa12.84□□□□□ -0.35
RBM39-243ENST00000528062 KLKB1P03952 638 aa12.84□□□□□ -0.35
RBM39-243ENST00000528062 SLC2A3P11169 496 aa12.84□□□□□ -0.35
RBM39-243ENST00000528062 LBPP18428 481 aa12.84□□□□□ -0.35
RBM39-243ENST00000528062 FCARP24071 287 aa12.84□□□□□ -0.35
RBM39-243ENST00000528062 NUP107P57740 925 aa12.84□□□□□ -0.35
RBM39-243ENST00000528062 ESRRGP62508 458 aa12.84□□□□□ -0.35
RBM39-243ENST00000528062 PYCR3Q53H96 274 aa12.84□□□□□ -0.35
RBM39-243ENST00000528062 PAGE3Q5JUK9 113 aa12.84□□□□□ -0.35
RBM39-243ENST00000528062 LRRC49Q8IUZ0 686 aa12.84□□□□□ -0.35
RBM39-243ENST00000528062 TADA1Q96BN2 335 aa12.84□□□□□ -0.35
RBM39-243ENST00000528062 TRIM62Q9BVG3 475 aa12.84□□□□□ -0.35
RBM39-243ENST00000528062 NAA50Q9GZZ1 169 aaKnown RBP12.84□□□□□ -0.35
RBM39-243ENST00000528062 CXorf21Q9HAI6 301 aa12.84□□□□□ -0.35
RBM39-243ENST00000528062 OLA1Q9NTK5 396 aaKnown RBP12.84□□□□□ -0.35
RBM39-243ENST00000528062 ZNHIT2Q9UHR6 403 aa12.84□□□□□ -0.35
RBM39-243ENST00000528062 FAF1Q9UNN5 650 aaPredicted RBP12.84□□□□□ -0.35
RBM39-243ENST00000528062 TIMM22Q9Y584 194 aa12.84□□□□□ -0.35
RBM39-243ENST00000528062 DOCK4Q8N1I0 1966 aa12.84□□□□□ -0.35
RBM39-243ENST00000528062 SLC12A8A0AV02 714 aa12.84□□□□□ -0.35
RBM39-243ENST00000528062 CCDC162PA2VCL2 907 aa12.84□□□□□ -0.35
RBM39-243ENST00000528062 H3BMQ9 156 aa12.84□□□□□ -0.35
RBM39-243ENST00000528062 SCAMP3O14828 347 aaKnown RBP12.84□□□□□ -0.35
RBM39-243ENST00000528062 CLOCKO15516 846 aa12.84□□□□□ -0.35
RBM39-243ENST00000528062 STC2O76061 302 aa12.84□□□□□ -0.35
RBM39-243ENST00000528062 CKMP06732 381 aa12.84□□□□□ -0.35
RBM39-243ENST00000528062 PIRTP0C851 137 aa12.84□□□□□ -0.35
RBM39-243ENST00000528062 MBL2P11226 248 aaPredicted RBP12.84□□□□□ -0.35
RBM39-243ENST00000528062 PRDX3P30048 256 aaKnown RBP12.84□□□□□ -0.35
RBM39-243ENST00000528062 YAP1P46937 504 aaKnown RBP12.84□□□□□ -0.35
RBM39-243ENST00000528062 SUOXP51687 545 aa12.84□□□□□ -0.35
RBM39-243ENST00000528062 SMAD4Q13485 552 aaKnown RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms