RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

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Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 HNF1BP35680 557 aa17.32■□□□□ 0.36
USH1C-205ENST00000527020 FUT11Q495W5 492 aa17.32■□□□□ 0.36
USH1C-205ENST00000527020 NANOGP8Q6NSW7 305 aa17.32■□□□□ 0.36
USH1C-205ENST00000527020 IL27RAQ6UWB1 636 aa17.32■□□□□ 0.36
USH1C-205ENST00000527020 SNX20Q7Z614 316 aa17.32■□□□□ 0.36
USH1C-205ENST00000527020 ZSWIM9Q86XI8 627 aa17.32■□□□□ 0.36
USH1C-205ENST00000527020 CMTR2Q8IYT2 770 aaKnown RBP17.32■□□□□ 0.36
USH1C-205ENST00000527020 NUDT8Q8WV74 236 aa17.32■□□□□ 0.36
USH1C-205ENST00000527020 TMEM79Q9BSE2 394 aa17.32■□□□□ 0.36
USH1C-205ENST00000527020 ASB8Q9H765 288 aa17.32■□□□□ 0.36
USH1C-205ENST00000527020 NANOGQ9H9S0 305 aa17.32■□□□□ 0.36
USH1C-205ENST00000527020 TMEM45AQ9NWC5 275 aa17.32■□□□□ 0.36
USH1C-205ENST00000527020 TNPO3Q9Y5L0 923 aaKnown RBP17.32■□□□□ 0.36
USH1C-205ENST00000527020 COMMD3-BMI1R4GMX3 469 aa17.32■□□□□ 0.36
USH1C-205ENST00000527020 TYW5A2RUC4 315 aaKnown RBP17.31■□□□□ 0.36
USH1C-205ENST00000527020 ANKRD28O15084 1053 aa17.31■□□□□ 0.36
USH1C-205ENST00000527020 GLUD1P00367 558 aa17.31■□□□□ 0.36
USH1C-205ENST00000527020 NCK1P16333 377 aa17.31■□□□□ 0.36
USH1C-205ENST00000527020 BPIP17213 487 aa17.31■□□□□ 0.36
USH1C-205ENST00000527020 UGT1A1P22309 533 aa17.31■□□□□ 0.36
USH1C-205ENST00000527020 UGT1A4P22310 534 aa17.31■□□□□ 0.36
USH1C-205ENST00000527020 UGT1A3P35503 534 aa17.31■□□□□ 0.36
USH1C-205ENST00000527020 UGT1A5P35504 534 aa17.31■□□□□ 0.36
USH1C-205ENST00000527020 EPHB3P54753 998 aa17.31■□□□□ 0.36
USH1C-205ENST00000527020 EEFSECP57772 596 aaKnown RBP17.31■□□□□ 0.36
USH1C-205ENST00000527020 SLC5A9Q2M3M2 681 aa17.31■□□□□ 0.36
USH1C-205ENST00000527020 MYLK3Q32MK0 819 aa17.31■□□□□ 0.36
USH1C-205ENST00000527020 SPOUT1Q5T280 376 aaKnown RBP17.31■□□□□ 0.36
USH1C-205ENST00000527020 INTS11Q5TA45 600 aaKnown RBP17.31■□□□□ 0.36
USH1C-205ENST00000527020 SLC2A7Q6PXP3 512 aa17.31■□□□□ 0.36
USH1C-205ENST00000527020 RBM44Q6ZP01 1051 aaKnown RBP17.31■□□□□ 0.36
USH1C-205ENST00000527020 RBFAQ8N0V3 343 aa17.31■□□□□ 0.36
USH1C-205ENST00000527020 DGCR14Q96DF8 476 aaKnown RBP17.31■□□□□ 0.36
USH1C-205ENST00000527020 KCTD14Q9BQ13 255 aaPredicted RBP17.31■□□□□ 0.36
USH1C-205ENST00000527020 C2orf49Q9BVC5 232 aaPredicted RBP17.31■□□□□ 0.36
USH1C-205ENST00000527020 ANKRD60Q9BZ19 345 aa17.31■□□□□ 0.36
USH1C-205ENST00000527020 OLAHQ9NV23 265 aa17.31■□□□□ 0.36
USH1C-205ENST00000527020 CCL27Q9Y4X3 112 aa17.31■□□□□ 0.36
USH1C-205ENST00000527020 PDLIM1O00151 329 aa17.3■□□□□ 0.36
USH1C-205ENST00000527020 RAD51BO15315 384 aa17.3■□□□□ 0.36
USH1C-205ENST00000527020 TPST1O60507 370 aa17.3■□□□□ 0.36
USH1C-205ENST00000527020 RSL1D1O76021 490 aaKnown RBP17.3■□□□□ 0.36
USH1C-205ENST00000527020 NELFEP18615 380 aaKnown RBP17.3■□□□□ 0.36
USH1C-205ENST00000527020 ACRV1P26436 265 aa17.3■□□□□ 0.36
USH1C-205ENST00000527020 CASP2P42575 452 aa17.3■□□□□ 0.36
USH1C-205ENST00000527020 HSPA7P48741 367 aa17.3■□□□□ 0.36
USH1C-205ENST00000527020 EMX2Q04743 252 aa17.3■□□□□ 0.36
USH1C-205ENST00000527020 BCL2L1Q07817 233 aa17.3■□□□□ 0.36
USH1C-205ENST00000527020 ABRAXAS2Q15018 415 aa17.3■□□□□ 0.36
USH1C-205ENST00000527020 FXNQ16595 210 aa17.3■□□□□ 0.36
USH1C-205ENST00000527020 AAK1Q2M2I8 961 aa17.3■□□□□ 0.36
USH1C-205ENST00000527020 DLEU7Q6UYE1 221 aa17.3■□□□□ 0.36
USH1C-205ENST00000527020 CBR4Q8N4T8 237 aa17.3■□□□□ 0.36
USH1C-205ENST00000527020 DPP10Q8N608 796 aa17.3■□□□□ 0.36
USH1C-205ENST00000527020 MFSD2AQ8NA29 543 aa17.3■□□□□ 0.36
USH1C-205ENST00000527020 TTC16Q8NEE8 873 aa17.3■□□□□ 0.36
USH1C-205ENST00000527020 TRPV3Q8NET8 790 aa17.3■□□□□ 0.36
USH1C-205ENST00000527020 DIS3LQ8TF46 1054 aaKnown RBP17.3■□□□□ 0.36
USH1C-205ENST00000527020 TFAP2CQ92754 450 aa17.3■□□□□ 0.36
USH1C-205ENST00000527020 TMEM169Q96HH4 297 aa17.3■□□□□ 0.36
USH1C-205ENST00000527020 MUC13Q9H3R2 512 aa17.3■□□□□ 0.36
USH1C-205ENST00000527020 GNPTGQ9UJJ9 305 aa17.3■□□□□ 0.36
USH1C-205ENST00000527020 OARD1Q9Y530 152 aa17.3■□□□□ 0.36
USH1C-205ENST00000527020 LTBP2Q14767 1821 aa17.3■□□□□ 0.36
USH1C-205ENST00000527020 KATNA1O75449 491 aa17.3■□□□□ 0.36
USH1C-205ENST00000527020 SLC25A14O95258 325 aaPredicted RBP17.3■□□□□ 0.36
USH1C-205ENST00000527020 GPIP06744 558 aa17.3■□□□□ 0.36
USH1C-205ENST00000527020 G6PDP11413 515 aa17.3■□□□□ 0.36
USH1C-205ENST00000527020 IL10P22301 178 aa17.3■□□□□ 0.36
USH1C-205ENST00000527020 CCT8P50990 548 aa17.3■□□□□ 0.36
USH1C-205ENST00000527020 CYP4F8P98187 520 aa17.3■□□□□ 0.36
USH1C-205ENST00000527020 PRKG2Q13237 762 aa17.3■□□□□ 0.36
USH1C-205ENST00000527020 LSAMPQ13449 338 aa17.3■□□□□ 0.36
USH1C-205ENST00000527020 PHKG1Q16816 387 aa17.3■□□□□ 0.36
USH1C-205ENST00000527020 RETSATQ6NUM9 610 aa17.3■□□□□ 0.36
USH1C-205ENST00000527020 DDI1Q8WTU0 396 aa17.3■□□□□ 0.36
USH1C-205ENST00000527020 ZNF558Q96NG5 402 aa17.3■□□□□ 0.36
USH1C-205ENST00000527020 TNKS2Q9H2K2 1166 aa17.3■□□□□ 0.36
USH1C-205ENST00000527020 IPPKQ9H8X2 491 aa17.3■□□□□ 0.36
USH1C-205ENST00000527020 SUN2Q9UH99 717 aa17.3■□□□□ 0.36
USH1C-205ENST00000527020 NEUROG3Q9Y4Z2 214 aa17.3■□□□□ 0.36
USH1C-205ENST00000527020 MYOFQ9NZM1 2061 aa17.3■□□□□ 0.36
USH1C-205ENST00000527020 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.29■□□□□ 0.36
USH1C-205ENST00000527020 NRG2O14511 850 aaPredicted RBP17.29■□□□□ 0.36
USH1C-205ENST00000527020 INPP4BO15327 924 aa17.29■□□□□ 0.36
USH1C-205ENST00000527020 TRIM16O95361 564 aa17.29■□□□□ 0.36
USH1C-205ENST00000527020 GUCA1CO95843 209 aa17.29■□□□□ 0.36
USH1C-205ENST00000527020 SPATA31D3P0C874 917 aa17.29■□□□□ 0.36
USH1C-205ENST00000527020 ITGALP20701 1170 aa17.29■□□□□ 0.36
USH1C-205ENST00000527020 HRH2P25021 359 aa17.29■□□□□ 0.36
USH1C-205ENST00000527020 ARL1P40616 181 aaPredicted RBP17.29■□□□□ 0.36
USH1C-205ENST00000527020 CSNK1DP48730 415 aa17.29■□□□□ 0.36
USH1C-205ENST00000527020 LMAN2Q12907 356 aa17.29■□□□□ 0.36
USH1C-205ENST00000527020 CHRNA6Q15825 494 aa17.29■□□□□ 0.36
USH1C-205ENST00000527020 CYP51A1Q16850 503 aa17.29■□□□□ 0.36
USH1C-205ENST00000527020 RFTN2Q52LD8 501 aaPredicted RBP17.29■□□□□ 0.36
USH1C-205ENST00000527020 GPRC6AQ5T6X5 926 aa17.29■□□□□ 0.36
USH1C-205ENST00000527020 CYP20A1Q6UW02 462 aa17.29■□□□□ 0.36
USH1C-205ENST00000527020 SPATA31D4Q6ZUB0 917 aa17.29■□□□□ 0.36
USH1C-205ENST00000527020 ANKRD33Q7Z3H0 272 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms