RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 AKT2P31751 481 aa4.42□□□□□ -1.7
CD44-213ENST00000525209 CSTF2P33240 577 aaKnown RBP eCLIP4.42□□□□□ -1.7
CD44-213ENST00000525209 HTR2BP41595 481 aa4.42□□□□□ -1.7
CD44-213ENST00000525209 HAAOP46952 286 aa4.42□□□□□ -1.7
CD44-213ENST00000525209 SLC6A12P48065 614 aa4.42□□□□□ -1.7
CD44-213ENST00000525209 PXNP49023 591 aaPredicted RBP4.42□□□□□ -1.7
CD44-213ENST00000525209 HNRNPFP52597 415 aaKnown RBP4.42□□□□□ -1.7
CD44-213ENST00000525209 ZNF134P52741 427 aa4.42□□□□□ -1.7
CD44-213ENST00000525209 TAS2R50P59544 299 aa4.42□□□□□ -1.7
CD44-213ENST00000525209 NUCB2P80303 420 aa4.42□□□□□ -1.7
CD44-213ENST00000525209 MRPS15P82914 257 aaKnown RBP4.42□□□□□ -1.7
CD44-213ENST00000525209 B4GALNT1Q00973 533 aa4.42□□□□□ -1.7
CD44-213ENST00000525209 EGR3Q06889 387 aa4.42□□□□□ -1.7
CD44-213ENST00000525209 MAB21L1Q13394 359 aa4.42□□□□□ -1.7
CD44-213ENST00000525209 CCNIQ14094 377 aa4.42□□□□□ -1.7
CD44-213ENST00000525209 TOB2Q14106 344 aaPredicted RBP4.42□□□□□ -1.7
CD44-213ENST00000525209 IL13RA2Q14627 380 aa4.42□□□□□ -1.7
CD44-213ENST00000525209 DECR1Q16698 335 aa4.42□□□□□ -1.7
CD44-213ENST00000525209 GPAT3Q53EU6 434 aa4.42□□□□□ -1.7
CD44-213ENST00000525209 TMEM41BQ5BJD5 291 aa4.42□□□□□ -1.7
CD44-213ENST00000525209 C9orf50Q5SZB4 431 aa4.42□□□□□ -1.7
CD44-213ENST00000525209 CERCAMQ5T4B2 595 aa4.42□□□□□ -1.7
CD44-213ENST00000525209 ZNF648Q5T619 568 aaPredicted RBP4.42□□□□□ -1.7
CD44-213ENST00000525209 KCTD11Q693B1 232 aa4.42□□□□□ -1.7
CD44-213ENST00000525209 TMEM200BQ69YZ2 307 aa4.42□□□□□ -1.7
CD44-213ENST00000525209 C8orf74Q6P047 294 aa4.42□□□□□ -1.7
CD44-213ENST00000525209 ZNF529Q6P280 563 aa4.42□□□□□ -1.7
CD44-213ENST00000525209 PODNL1Q6PEZ8 512 aa4.42□□□□□ -1.7
CD44-213ENST00000525209 DEGS2Q6QHC5 323 aa4.42□□□□□ -1.7
CD44-213ENST00000525209 C16orf89Q6UX73 402 aa4.42□□□□□ -1.7
CD44-213ENST00000525209 SEPT14Q6ZU15 432 aa4.42□□□□□ -1.7
CD44-213ENST00000525209 USP30Q70CQ3 517 aa4.42□□□□□ -1.7
CD44-213ENST00000525209 SUPT6HQ7KZ85 1726 aaKnown RBP4.42□□□□□ -1.7
CD44-213ENST00000525209 EFL1Q7Z2Z2 1120 aaKnown RBP4.42□□□□□ -1.7
CD44-213ENST00000525209 POGZQ7Z3K3 1410 aa4.42□□□□□ -1.7
CD44-213ENST00000525209 TRIM74Q86UV6 250 aa4.42□□□□□ -1.7
CD44-213ENST00000525209 TRIM73Q86UV7 250 aa4.42□□□□□ -1.7
CD44-213ENST00000525209 FAM228AQ86W67 206 aa4.42□□□□□ -1.7
CD44-213ENST00000525209 NRROSQ86YC3 692 aa4.42□□□□□ -1.7
CD44-213ENST00000525209 HACE1Q8IYU2 909 aa4.42□□□□□ -1.7
CD44-213ENST00000525209 ABI1Q8IZP0 508 aa4.42□□□□□ -1.7
CD44-213ENST00000525209 RNF148Q8N7C7 305 aa4.42□□□□□ -1.7
CD44-213ENST00000525209 AMER2Q8N7J2 671 aa4.42□□□□□ -1.7
CD44-213ENST00000525209 C8orf58Q8NAV2 365 aa4.42□□□□□ -1.7
CD44-213ENST00000525209 CMASQ8NFW8 434 aaPredicted RBP4.42□□□□□ -1.7
CD44-213ENST00000525209 CLHC1Q8NHS4 586 aa4.42□□□□□ -1.7
CD44-213ENST00000525209 B4GALNT2Q8NHY0 566 aa4.42□□□□□ -1.7
CD44-213ENST00000525209 RAB3IL1Q8TBN0 382 aa4.42□□□□□ -1.7
CD44-213ENST00000525209 UBE2FQ969M7 185 aa4.42□□□□□ -1.7
CD44-213ENST00000525209 C16orf58Q96GQ5 468 aa4.42□□□□□ -1.7
CD44-213ENST00000525209 SLC41A3Q96GZ6 507 aa4.42□□□□□ -1.7
CD44-213ENST00000525209 FAM46AQ96IP4 442 aaKnown RBP4.42□□□□□ -1.7
CD44-213ENST00000525209 FAM71F1Q96KD3 344 aaPredicted RBP4.42□□□□□ -1.7
CD44-213ENST00000525209 RPL10LQ96L21 214 aaKnown RBP4.42□□□□□ -1.7
CD44-213ENST00000525209 LRFN5Q96NI6 719 aa4.42□□□□□ -1.7
CD44-213ENST00000525209 LRRC37BQ96QE4 947 aa4.42□□□□□ -1.7
CD44-213ENST00000525209 HAPLN3Q96S86 360 aa4.42□□□□□ -1.7
CD44-213ENST00000525209 G6PC3Q9BUM1 346 aa4.42□□□□□ -1.7
CD44-213ENST00000525209 TRIM62Q9BVG3 475 aa4.42□□□□□ -1.7
CD44-213ENST00000525209 CEP41Q9BYV8 373 aa4.42□□□□□ -1.7
CD44-213ENST00000525209 EGLN1Q9GZT9 426 aa4.42□□□□□ -1.7
CD44-213ENST00000525209 SPATC1LQ9H0A9 340 aa4.42□□□□□ -1.7
CD44-213ENST00000525209 HIPK3Q9H422 1215 aa4.42□□□□□ -1.7
CD44-213ENST00000525209 PLEKHA4Q9H4M7 779 aa4.42□□□□□ -1.7
CD44-213ENST00000525209 GSTO2Q9H4Y5 243 aa4.42□□□□□ -1.7
CD44-213ENST00000525209 C7orf69Q9H7B7 122 aa4.42□□□□□ -1.7
CD44-213ENST00000525209 TDRD3Q9H7E2 651 aaKnown RBP4.42□□□□□ -1.7
CD44-213ENST00000525209 KCNMB3Q9NPA1 279 aa4.42□□□□□ -1.7
CD44-213ENST00000525209 PAK6Q9NQU5 681 aaPredicted RBP4.42□□□□□ -1.7
CD44-213ENST00000525209 NUDT15Q9NV35 164 aa4.42□□□□□ -1.7
CD44-213ENST00000525209 MTMR10Q9NXD2 777 aa4.42□□□□□ -1.7
CD44-213ENST00000525209 ING3Q9NXR8 418 aa4.42□□□□□ -1.7
CD44-213ENST00000525209 KLHL28Q9NXS3 571 aa4.42□□□□□ -1.7
CD44-213ENST00000525209 ETAA1Q9NY74 926 aa4.42□□□□□ -1.7
CD44-213ENST00000525209 POLLQ9UGP5 575 aa4.42□□□□□ -1.7
CD44-213ENST00000525209 HBS1LQ9Y450 684 aaKnown RBP4.42□□□□□ -1.7
CD44-213ENST00000525209 FER1L4A9Z1Z3 1794 aa4.42□□□□□ -1.7
CD44-213ENST00000525209 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.41□□□□□ -1.7
CD44-213ENST00000525209 A0A0B4J293 547 aa4.41□□□□□ -1.7
CD44-213ENST00000525209 A0A1W2PRX2 142 aa4.41□□□□□ -1.7
CD44-213ENST00000525209 C17orf102A2RUQ5 167 aa4.41□□□□□ -1.7
CD44-213ENST00000525209 C17orf100A8MU93 164 aa4.41□□□□□ -1.7
CD44-213ENST00000525209 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.41□□□□□ -1.7
CD44-213ENST00000525209 H3BS24 57 aa4.41□□□□□ -1.7
CD44-213ENST00000525209 KRT86O43790 486 aa4.41□□□□□ -1.7
CD44-213ENST00000525209 DNAJB6O75190 326 aa4.41□□□□□ -1.7
CD44-213ENST00000525209 TRIM3O75382 744 aaPredicted RBP4.41□□□□□ -1.7
CD44-213ENST00000525209 CSDE1O75534 798 aaKnown RBP4.41□□□□□ -1.7
CD44-213ENST00000525209 IGLV1-40P01703 118 aa4.41□□□□□ -1.7
CD44-213ENST00000525209 CRYGCP07315 174 aa4.41□□□□□ -1.7
CD44-213ENST00000525209 FHP07954 510 aa4.41□□□□□ -1.7
CD44-213ENST00000525209 HOXB5P09067 269 aa4.41□□□□□ -1.7
CD44-213ENST00000525209 DDX5P17844 614 aaKnown RBP4.41□□□□□ -1.7
CD44-213ENST00000525209 IGFBP2P18065 325 aa4.41□□□□□ -1.7
CD44-213ENST00000525209 DRD4P21917 467 aa4.41□□□□□ -1.7
CD44-213ENST00000525209 MMP8P22894 467 aa4.41□□□□□ -1.7
CD44-213ENST00000525209 DNASE1P24855 282 aa4.41□□□□□ -1.7
CD44-213ENST00000525209 CD1BP29016 333 aa4.41□□□□□ -1.7
CD44-213ENST00000525209 CDC25AP30304 524 aa4.41□□□□□ -1.7
CD44-213ENST00000525209 CA8P35219 290 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms