RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 PEX12O00623 359 aa11.34□□□□□ -0.59
SDCBP-211ENST00000523441 CHUKO15111 745 aa11.34□□□□□ -0.59
SDCBP-211ENST00000523441 ZBTB11O95625 1053 aaPredicted RBP11.34□□□□□ -0.59
SDCBP-211ENST00000523441 CAPN1P07384 714 aa11.34□□□□□ -0.59
SDCBP-211ENST00000523441 CD48P09326 243 aa11.34□□□□□ -0.59
SDCBP-211ENST00000523441 CDH3P22223 829 aa11.34□□□□□ -0.59
SDCBP-211ENST00000523441 LMAN1P49257 510 aa11.34□□□□□ -0.59
SDCBP-211ENST00000523441 KPNA2P52292 529 aaKnown RBP11.34□□□□□ -0.59
SDCBP-211ENST00000523441 NFE2L1Q14494 772 aa11.34□□□□□ -0.59
SDCBP-211ENST00000523441 NCF4Q15080 339 aa11.34□□□□□ -0.59
SDCBP-211ENST00000523441 DPYSL2Q16555 572 aa11.34□□□□□ -0.59
SDCBP-211ENST00000523441 CCDC122Q5T0U0 273 aa11.34□□□□□ -0.59
SDCBP-211ENST00000523441 ZFYVE27Q5T4F4 411 aa11.34□□□□□ -0.59
SDCBP-211ENST00000523441 PLEKHA7Q6IQ23 1121 aa11.34□□□□□ -0.59
SDCBP-211ENST00000523441 FAM83HQ6ZRV2 1179 aaPredicted RBP11.34□□□□□ -0.59
SDCBP-211ENST00000523441 MRGPREQ86SM8 312 aa11.34□□□□□ -0.59
SDCBP-211ENST00000523441 OOSP2Q86WS3 158 aa11.34□□□□□ -0.59
SDCBP-211ENST00000523441 TMEM151BQ8IW70 566 aa11.34□□□□□ -0.59
SDCBP-211ENST00000523441 TEX26Q8N6G2 289 aa11.34□□□□□ -0.59
SDCBP-211ENST00000523441 CCNYQ8ND76 341 aa11.34□□□□□ -0.59
SDCBP-211ENST00000523441 ARRDC2Q8TBH0 407 aa11.34□□□□□ -0.59
SDCBP-211ENST00000523441 GRHL3Q8TE85 626 aa11.34□□□□□ -0.59
SDCBP-211ENST00000523441 BTBD6Q96KE9 485 aa11.34□□□□□ -0.59
SDCBP-211ENST00000523441 LURAP1Q96LR2 239 aa11.34□□□□□ -0.59
SDCBP-211ENST00000523441 RAB33BQ9H082 229 aa11.34□□□□□ -0.59
SDCBP-211ENST00000523441 PCDH18Q9HCL0 1135 aa11.34□□□□□ -0.59
SDCBP-211ENST00000523441 PCMTD2Q9NV79 361 aa11.34□□□□□ -0.59
SDCBP-211ENST00000523441 C5AR2Q9P296 337 aa11.34□□□□□ -0.59
SDCBP-211ENST00000523441 GPN3Q9UHW5 284 aaPredicted RBP11.34□□□□□ -0.59
SDCBP-211ENST00000523441 PTRH2Q9Y3E5 179 aaKnown RBP11.34□□□□□ -0.59
SDCBP-211ENST00000523441 PCDHGA10Q9Y5H3 936 aa11.34□□□□□ -0.59
SDCBP-211ENST00000523441 GSAPA4D1B5 854 aa11.33□□□□□ -0.6
SDCBP-211ENST00000523441 MATN3O15232 486 aa11.33□□□□□ -0.6
SDCBP-211ENST00000523441 POP7O75817 140 aaKnown RBP11.33□□□□□ -0.6
SDCBP-211ENST00000523441 FERP16591 822 aa11.33□□□□□ -0.6
SDCBP-211ENST00000523441 ITGA3P26006 1051 aa11.33□□□□□ -0.6
SDCBP-211ENST00000523441 PREPP48147 710 aa11.33□□□□□ -0.6
SDCBP-211ENST00000523441 ZNF135P52742 658 aaPredicted RBP11.33□□□□□ -0.6
SDCBP-211ENST00000523441 UBXN1Q04323 297 aa11.33□□□□□ -0.6
SDCBP-211ENST00000523441 SRSF11Q05519 484 aaKnown RBP11.33□□□□□ -0.6
SDCBP-211ENST00000523441 TMEM115Q12893 351 aaPredicted RBP11.33□□□□□ -0.6
SDCBP-211ENST00000523441 CDC16Q13042 620 aa11.33□□□□□ -0.6
SDCBP-211ENST00000523441 BECN1Q14457 450 aa11.33□□□□□ -0.6
SDCBP-211ENST00000523441 KRT33BQ14525 404 aa11.33□□□□□ -0.6
SDCBP-211ENST00000523441 MYBPC3Q14896 1274 aa11.33□□□□□ -0.6
SDCBP-211ENST00000523441 AGAP9Q5VTM2 703 aa11.33□□□□□ -0.6
SDCBP-211ENST00000523441 DET1Q7L5Y6 550 aa11.33□□□□□ -0.6
SDCBP-211ENST00000523441 AMZ2Q86W34 360 aa11.33□□□□□ -0.6
SDCBP-211ENST00000523441 KMT5CQ86Y97 462 aa11.33□□□□□ -0.6
SDCBP-211ENST00000523441 PSTKQ8IV42 348 aaKnown RBP11.33□□□□□ -0.6
SDCBP-211ENST00000523441 PARP9Q8IXQ6 854 aa11.33□□□□□ -0.6
SDCBP-211ENST00000523441 TRAM1L1Q8N609 369 aa11.33□□□□□ -0.6
SDCBP-211ENST00000523441 BEND7Q8N7W2 519 aaPredicted RBP11.33□□□□□ -0.6
SDCBP-211ENST00000523441 OR4E2Q8NGC2 313 aa11.33□□□□□ -0.6
SDCBP-211ENST00000523441 TM9SF4Q92544 642 aa11.33□□□□□ -0.6
SDCBP-211ENST00000523441 C12orf66Q96MD2 445 aa11.33□□□□□ -0.6
SDCBP-211ENST00000523441 TRAPPC9Q96Q05 1148 aa11.33□□□□□ -0.6
SDCBP-211ENST00000523441 LYSMD1Q96S90 227 aa11.33□□□□□ -0.6
SDCBP-211ENST00000523441 NRTNQ99748 197 aa11.33□□□□□ -0.6
SDCBP-211ENST00000523441 ADGRE3Q9BY15 652 aa11.33□□□□□ -0.6
SDCBP-211ENST00000523441 WWP1Q9H0M0 922 aa11.33□□□□□ -0.6
SDCBP-211ENST00000523441 ZNF552Q9H707 407 aaPredicted RBP11.33□□□□□ -0.6
SDCBP-211ENST00000523441 SH3BGRL2Q9UJC5 107 aa11.33□□□□□ -0.6
SDCBP-211ENST00000523441 NOVA2Q9UNW9 492 aaKnown RBP11.33□□□□□ -0.6
SDCBP-211ENST00000523441 ZNF711Q9Y462 761 aa11.33□□□□□ -0.6
SDCBP-211ENST00000523441 MYO7BQ6PIF6 2116 aa11.33□□□□□ -0.6
SDCBP-211ENST00000523441 NUP210LQ5VU65 1888 aa11.32□□□□□ -0.6
SDCBP-211ENST00000523441 RGSL1A5PLK6 1076 aa11.32□□□□□ -0.6
SDCBP-211ENST00000523441 KCNK1O00180 336 aa11.32□□□□□ -0.6
SDCBP-211ENST00000523441 GPR39O43194 453 aa11.32□□□□□ -0.6
SDCBP-211ENST00000523441 ZNF749O43361 778 aa11.32□□□□□ -0.6
SDCBP-211ENST00000523441 VEGFDO43915 354 aa11.32□□□□□ -0.6
SDCBP-211ENST00000523441 FTLP02792 175 aaPredicted RBP11.32□□□□□ -0.6
SDCBP-211ENST00000523441 PVRP15151 417 aa11.32□□□□□ -0.6
SDCBP-211ENST00000523441 BPIP17213 487 aa11.32□□□□□ -0.6
SDCBP-211ENST00000523441 AGXTP21549 392 aa11.32□□□□□ -0.6
SDCBP-211ENST00000523441 RORAP35398 523 aa11.32□□□□□ -0.6
SDCBP-211ENST00000523441 FOLR3P41439 243 aa11.32□□□□□ -0.6
SDCBP-211ENST00000523441 RPL26P61254 145 aaKnown RBP11.32□□□□□ -0.6
SDCBP-211ENST00000523441 GSE1Q14687 1217 aa11.32□□□□□ -0.6
SDCBP-211ENST00000523441 ATP13A5Q4VNC0 1218 aa11.32□□□□□ -0.6
SDCBP-211ENST00000523441 DCAF10Q5QP82 559 aa11.32□□□□□ -0.6
SDCBP-211ENST00000523441 TIGD7Q6NT04 549 aaPredicted RBP11.32□□□□□ -0.6
SDCBP-211ENST00000523441 SPOCD1Q6ZMY3 1216 aa11.32□□□□□ -0.6
SDCBP-211ENST00000523441 GDF7Q7Z4P5 450 aa11.32□□□□□ -0.6
SDCBP-211ENST00000523441 C11orf96Q7Z7L8 435 aa11.32□□□□□ -0.6
SDCBP-211ENST00000523441 DNAJB14Q8TBM8 379 aa11.32□□□□□ -0.6
SDCBP-211ENST00000523441 CPLX3Q8WVH0 158 aa11.32□□□□□ -0.6
SDCBP-211ENST00000523441 MAGEB10Q96LZ2 347 aaPredicted RBP11.32□□□□□ -0.6
SDCBP-211ENST00000523441 FER1L6-AS2Q96M78 137 aa11.32□□□□□ -0.6
SDCBP-211ENST00000523441 GBP5Q96PP8 586 aa11.32□□□□□ -0.6
SDCBP-211ENST00000523441 INSM2Q96T92 566 aaPredicted RBP11.32□□□□□ -0.6
SDCBP-211ENST00000523441 CD180Q99467 661 aa11.32□□□□□ -0.6
SDCBP-211ENST00000523441 IRAK4Q9NWZ3 460 aa11.32□□□□□ -0.6
SDCBP-211ENST00000523441 SEMA5BQ9P283 1151 aa11.32□□□□□ -0.6
SDCBP-211ENST00000523441 TMPRSS11EQ9UL52 423 aa11.32□□□□□ -0.6
SDCBP-211ENST00000523441 RPL26L1Q9UNX3 145 aaKnown RBP11.32□□□□□ -0.6
SDCBP-211ENST00000523441 PADI2Q9Y2J8 665 aa11.32□□□□□ -0.6
SDCBP-211ENST00000523441 DOCK10Q96BY6 2186 aa11.31□□□□□ -0.6
SDCBP-211ENST00000523441 GPR89AB7ZAQ6 455 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms