RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 PAPOLAP51003 745 aaKnown RBP3.32□□□□□ -1.88
VPS13B-209ENST00000521559 SEC61A1P61619 476 aaKnown RBP3.32□□□□□ -1.88
VPS13B-209ENST00000521559 ABATP80404 500 aa3.32□□□□□ -1.88
VPS13B-209ENST00000521559 GTF2BQ00403 316 aa3.32□□□□□ -1.88
VPS13B-209ENST00000521559 PNOCQ13519 176 aa3.32□□□□□ -1.88
VPS13B-209ENST00000521559 TCTN1Q2MV58 587 aa3.32□□□□□ -1.88
VPS13B-209ENST00000521559 PSRC1Q6PGN9 363 aaPredicted RBP3.32□□□□□ -1.88
VPS13B-209ENST00000521559 CATSPER4Q7RTX7 472 aa3.32□□□□□ -1.88
VPS13B-209ENST00000521559 HAUS6Q7Z4H7 955 aa3.32□□□□□ -1.88
VPS13B-209ENST00000521559 DEFB128Q7Z7B8 93 aa3.32□□□□□ -1.88
VPS13B-209ENST00000521559 SERPINA11Q86U17 422 aa3.32□□□□□ -1.88
VPS13B-209ENST00000521559 FAM228AQ86W67 206 aa3.32□□□□□ -1.88
VPS13B-209ENST00000521559 TMC8Q8IU68 726 aa3.32□□□□□ -1.88
VPS13B-209ENST00000521559 SCN4BQ8IWT1 228 aa3.32□□□□□ -1.88
VPS13B-209ENST00000521559 RBMXL3Q8N7X1 1067 aaKnown RBP3.32□□□□□ -1.88
VPS13B-209ENST00000521559 OR1N1Q8NGS0 311 aa3.32□□□□□ -1.88
VPS13B-209ENST00000521559 OR14A16Q8NHC5 309 aa3.32□□□□□ -1.88
VPS13B-209ENST00000521559 SCAMP5Q8TAC9 235 aa3.32□□□□□ -1.88
VPS13B-209ENST00000521559 SPATA20Q8TB22 786 aa3.32□□□□□ -1.88
VPS13B-209ENST00000521559 GPT2Q8TD30 523 aa3.32□□□□□ -1.88
VPS13B-209ENST00000521559 HERVK_113Q902F9 699 aa3.32□□□□□ -1.88
VPS13B-209ENST00000521559 SMARCE1Q969G3 411 aa3.32□□□□□ -1.88
VPS13B-209ENST00000521559 HVCN1Q96D96 273 aa3.32□□□□□ -1.88
VPS13B-209ENST00000521559 CCDC51Q96ER9 411 aa3.32□□□□□ -1.88
VPS13B-209ENST00000521559 GSDMAQ96QA5 445 aa3.32□□□□□ -1.88
VPS13B-209ENST00000521559 ACCSQ96QU6 501 aa3.32□□□□□ -1.88
VPS13B-209ENST00000521559 KIFC3Q9BVG8 833 aa3.32□□□□□ -1.88
VPS13B-209ENST00000521559 STRA6Q9BX79 667 aa3.32□□□□□ -1.88
VPS13B-209ENST00000521559 FTHL17Q9BXU8 183 aa3.32□□□□□ -1.88
VPS13B-209ENST00000521559 KRTAP2-2Q9BYT5 123 aa3.32□□□□□ -1.88
VPS13B-209ENST00000521559 IFIH1Q9BYX4 1025 aaKnown RBP3.32□□□□□ -1.88
VPS13B-209ENST00000521559 MTIF3Q9H2K0 278 aaKnown RBP3.32□□□□□ -1.88
VPS13B-209ENST00000521559 CLSTN2Q9H4D0 955 aa3.32□□□□□ -1.88
VPS13B-209ENST00000521559 AGPAT5Q9NUQ2 364 aa3.32□□□□□ -1.88
VPS13B-209ENST00000521559 EXOC1Q9NV70 894 aa3.32□□□□□ -1.88
VPS13B-209ENST00000521559 PRMT7Q9NVM4 692 aaPredicted RBP3.32□□□□□ -1.88
VPS13B-209ENST00000521559 RMND1Q9NWS8 449 aa3.32□□□□□ -1.88
VPS13B-209ENST00000521559 TBC1D7Q9P0N9 293 aa3.32□□□□□ -1.88
VPS13B-209ENST00000521559 KLQ9UEF7 1012 aa3.32□□□□□ -1.88
VPS13B-209ENST00000521559 MAN1B1Q9UKM7 699 aa3.32□□□□□ -1.88
VPS13B-209ENST00000521559 PADI3Q9ULW8 664 aa3.32□□□□□ -1.88
VPS13B-209ENST00000521559 TBX20Q9UMR3 447 aa3.32□□□□□ -1.88
VPS13B-209ENST00000521559 EXOC7Q9UPT5 735 aa3.32□□□□□ -1.88
VPS13B-209ENST00000521559 OSGIN2Q9Y236 505 aa3.32□□□□□ -1.88
VPS13B-209ENST00000521559 ADGRA3Q8IWK6 1321 aa3.32□□□□□ -1.88
VPS13B-209ENST00000521559 ZNFX1Q9P2E3 1918 aaKnown RBP3.31□□□□□ -1.88
VPS13B-209ENST00000521559 RBBP6Q7Z6E9 1792 aaKnown RBP3.31□□□□□ -1.88
VPS13B-209ENST00000521559 UBE4BO95155 1302 aa3.31□□□□□ -1.88
VPS13B-209ENST00000521559 A0A0U1RQF3 1178 aa3.31□□□□□ -1.88
VPS13B-209ENST00000521559 CLEC18AA5D8T8 446 aa3.31□□□□□ -1.88
VPS13B-209ENST00000521559 ANKRD63C9JTQ0 380 aa3.31□□□□□ -1.88
VPS13B-209ENST00000521559 K7ENM7 598 aa3.31□□□□□ -1.88
VPS13B-209ENST00000521559 HSPB6O14558 160 aa3.31□□□□□ -1.88
VPS13B-209ENST00000521559 EIF3DO15371 548 aaKnown RBP eCLIP3.31□□□□□ -1.88
VPS13B-209ENST00000521559 B4GALT5O43286 388 aa3.31□□□□□ -1.88
VPS13B-209ENST00000521559 KRT86O43790 486 aa3.31□□□□□ -1.88
VPS13B-209ENST00000521559 TSPAN1O60635 241 aa3.31□□□□□ -1.88
VPS13B-209ENST00000521559 TOM1L1O75674 476 aa3.31□□□□□ -1.88
VPS13B-209ENST00000521559 GCNT3O95395 438 aa3.31□□□□□ -1.88
VPS13B-209ENST00000521559 STAG3L1P0CL83 205 aa3.31□□□□□ -1.88
VPS13B-209ENST00000521559 FCGR1AP12314 374 aa3.31□□□□□ -1.88
VPS13B-209ENST00000521559 NAGAP17050 411 aa3.31□□□□□ -1.88
VPS13B-209ENST00000521559 ARF4P18085 180 aaPredicted RBP3.31□□□□□ -1.88
VPS13B-209ENST00000521559 GNLYP22749 145 aa3.31□□□□□ -1.88
VPS13B-209ENST00000521559 PAX3P23760 479 aa3.31□□□□□ -1.88
VPS13B-209ENST00000521559 HOXD13P35453 343 aa3.31□□□□□ -1.88
VPS13B-209ENST00000521559 LIG4P49917 911 aa3.31□□□□□ -1.88
VPS13B-209ENST00000521559 NUDT6P53370 316 aa3.31□□□□□ -1.88
VPS13B-209ENST00000521559 ARL4CP56559 192 aa3.31□□□□□ -1.88
VPS13B-209ENST00000521559 TMPRSS3P57727 454 aa3.31□□□□□ -1.88
VPS13B-209ENST00000521559 SNRPFP62306 86 aaKnown RBP3.31□□□□□ -1.88
VPS13B-209ENST00000521559 RPL36AP83881 106 aaKnown RBP3.31□□□□□ -1.88
VPS13B-209ENST00000521559 POU3F1Q03052 451 aaPredicted RBP3.31□□□□□ -1.88
VPS13B-209ENST00000521559 GOLGA8FQ08AF8 430 aa3.31□□□□□ -1.88
VPS13B-209ENST00000521559 STK4Q13043 487 aa3.31□□□□□ -1.88
VPS13B-209ENST00000521559 PRPF4BQ13523 1007 aaKnown RBP3.31□□□□□ -1.88
VPS13B-209ENST00000521559 KRT81Q14533 505 aa3.31□□□□□ -1.88
VPS13B-209ENST00000521559 SHHQ15465 462 aa3.31□□□□□ -1.88
VPS13B-209ENST00000521559 TAF5Q15542 800 aa3.31□□□□□ -1.88
VPS13B-209ENST00000521559 CAMK4Q16566 473 aa3.31□□□□□ -1.88
VPS13B-209ENST00000521559 KYAT1Q16773 422 aa3.31□□□□□ -1.88
VPS13B-209ENST00000521559 KNOP1Q1ED39 458 aaKnown RBP3.31□□□□□ -1.88
VPS13B-209ENST00000521559 ZC2HC1CQ53FD0 456 aaPredicted RBP3.31□□□□□ -1.88
VPS13B-209ENST00000521559 RUNDC3AQ59EK9 446 aa3.31□□□□□ -1.88
VPS13B-209ENST00000521559 EFHC1Q5JVL4 640 aa3.31□□□□□ -1.88
VPS13B-209ENST00000521559 CCDC183Q5T5S1 534 aa3.31□□□□□ -1.88
VPS13B-209ENST00000521559 ZNF658Q5TYW1 1059 aaPredicted RBP3.31□□□□□ -1.88
VPS13B-209ENST00000521559 ATF7IP2Q5U623 682 aa3.31□□□□□ -1.88
VPS13B-209ENST00000521559 TWF2Q6IBS0 349 aaKnown RBP3.31□□□□□ -1.88
VPS13B-209ENST00000521559 JMJD6Q6NYC1 403 aaPredicted RBP3.31□□□□□ -1.88
VPS13B-209ENST00000521559 TMEM71Q6P5X7 295 aa3.31□□□□□ -1.88
VPS13B-209ENST00000521559 NOTUMQ6P988 496 aa3.31□□□□□ -1.88
VPS13B-209ENST00000521559 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.31□□□□□ -1.88
VPS13B-209ENST00000521559 Q6ZSV7 163 aa3.31□□□□□ -1.88
VPS13B-209ENST00000521559 SLC24A5Q71RS6 500 aa3.31□□□□□ -1.88
VPS13B-209ENST00000521559 MON1BQ7L1V2 547 aa3.31□□□□□ -1.88
VPS13B-209ENST00000521559 WDR5BQ86VZ2 330 aa3.31□□□□□ -1.88
VPS13B-209ENST00000521559 ECHDC2Q86YB7 292 aa3.31□□□□□ -1.88
VPS13B-209ENST00000521559 MYOCDQ8IZQ8 938 aa3.31□□□□□ -1.88
VPS13B-209ENST00000521559 SYCP3Q8IZU3 236 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms