RNA–Protein interactions for RNA: ENST00000521216.5

SKP1-208, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SKP1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-208ENST00000521216 PLXDC2Q6UX71 529 aa4.9□□□□□ -1.63
SKP1-208ENST00000521216 LDB1Q86U70 411 aaPredicted RBP4.9□□□□□ -1.63
SKP1-208ENST00000521216 LONP2Q86WA8 852 aa4.9□□□□□ -1.63
SKP1-208ENST00000521216 DNAAF5Q86Y56 855 aa4.9□□□□□ -1.63
SKP1-208ENST00000521216 PTOV1Q86YD1 416 aa4.9□□□□□ -1.63
SKP1-208ENST00000521216 ABHD8Q96I13 439 aa4.9□□□□□ -1.63
SKP1-208ENST00000521216 FAM81BQ96LP2 452 aa4.9□□□□□ -1.63
SKP1-208ENST00000521216 ZNF582Q96NG8 517 aaPredicted RBP4.9□□□□□ -1.63
SKP1-208ENST00000521216 GCNAQ96QF7 691 aa4.9□□□□□ -1.63
SKP1-208ENST00000521216 ABHD1Q96SE0 405 aa4.9□□□□□ -1.63
SKP1-208ENST00000521216 CENPOQ9BU64 300 aa4.9□□□□□ -1.63
SKP1-208ENST00000521216 APOL6Q9BWW8 343 aa4.9□□□□□ -1.63
SKP1-208ENST00000521216 KLHL4Q9C0H6 718 aa4.9□□□□□ -1.63
SKP1-208ENST00000521216 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.9□□□□□ -1.632e-6■□□□□ 8.4
SKP1-208ENST00000521216 MBNL1Q9NR56 388 aaKnown RBP4.9□□□□□ -1.63
SKP1-208ENST00000521216 MIOSQ9NXC5 875 aa4.9□□□□□ -1.63
SKP1-208ENST00000521216 KCNG2Q9UJ96 466 aa4.9□□□□□ -1.63
SKP1-208ENST00000521216 PPIEQ9UNP9 301 aaKnown RBP4.9□□□□□ -1.63
SKP1-208ENST00000521216 SCN5AQ14524 2016 aa4.89□□□□□ -1.63
SKP1-208ENST00000521216 SYNGR3O43761 229 aa4.89□□□□□ -1.63
SKP1-208ENST00000521216 SYNCRIPO60506 623 aaKnown RBP4.89□□□□□ -1.63
SKP1-208ENST00000521216 ERAL1O75616 437 aaKnown RBP4.89□□□□□ -1.63
SKP1-208ENST00000521216 KRT36O76013 467 aa4.89□□□□□ -1.63
SKP1-208ENST00000521216 CSF2RAP15509 400 aa4.89□□□□□ -1.63
SKP1-208ENST00000521216 MCCP23508 829 aa4.89□□□□□ -1.63
SKP1-208ENST00000521216 HOXA1P49639 335 aaPredicted RBP4.89□□□□□ -1.63
SKP1-208ENST00000521216 MBTD1Q05BQ5 628 aa4.89□□□□□ -1.63
SKP1-208ENST00000521216 GAGE2BQ13066 116 aa4.89□□□□□ -1.63
SKP1-208ENST00000521216 GRAPQ13588 217 aa4.89□□□□□ -1.63
SKP1-208ENST00000521216 DUOXA1Q1HG43 343 aa4.89□□□□□ -1.63
SKP1-208ENST00000521216 C15orf59Q2T9L4 293 aaPredicted RBP4.89□□□□□ -1.63
SKP1-208ENST00000521216 ACCSLQ4AC99 568 aa4.89□□□□□ -1.63
SKP1-208ENST00000521216 GAGE2EQ4V326 116 aa4.89□□□□□ -1.63
SKP1-208ENST00000521216 RAB6CQ53S08 254 aa4.89□□□□□ -1.63
SKP1-208ENST00000521216 KRT79Q5XKE5 535 aa4.89□□□□□ -1.63
SKP1-208ENST00000521216 GPR139Q6DWJ6 353 aa4.89□□□□□ -1.63
SKP1-208ENST00000521216 DHRS7BQ6IAN0 325 aaPredicted RBP4.89□□□□□ -1.63
SKP1-208ENST00000521216 GAGE2AQ6NT46 116 aa4.89□□□□□ -1.63
SKP1-208ENST00000521216 PACS1Q6VY07 963 aa4.89□□□□□ -1.63
SKP1-208ENST00000521216 SLC26A9Q7LBE3 791 aa4.89□□□□□ -1.63
SKP1-208ENST00000521216 SLC24A4Q8NFF2 622 aa4.89□□□□□ -1.63
SKP1-208ENST00000521216 WDR20Q8TBZ3 569 aa4.89□□□□□ -1.63
SKP1-208ENST00000521216 PTERQ96BW5 349 aa4.89□□□□□ -1.63
SKP1-208ENST00000521216 PRMT6Q96LA8 375 aaPredicted RBP4.89□□□□□ -1.63
SKP1-208ENST00000521216 TRMT61BQ9BVS5 477 aaKnown RBP4.89□□□□□ -1.63
SKP1-208ENST00000521216 RAB6CQ9H0N0 254 aa4.89□□□□□ -1.63
SKP1-208ENST00000521216 PPIL3Q9H2H8 161 aaKnown RBP4.89□□□□□ -1.63
SKP1-208ENST00000521216 SLC38A7Q9NVC3 462 aa4.89□□□□□ -1.63
SKP1-208ENST00000521216 GAGE2DQ9UEU5 116 aa4.89□□□□□ -1.63
SKP1-208ENST00000521216 JRKLQ9Y4A0 524 aa4.89□□□□□ -1.63
SKP1-208ENST00000521216 IGLV5-45A0A087WSX0 123 aa4.88□□□□□ -1.63
SKP1-208ENST00000521216 A0A0G2JNG1 304 aa4.88□□□□□ -1.63
SKP1-208ENST00000521216 CTAGE9A4FU28 777 aa4.88□□□□□ -1.63
SKP1-208ENST00000521216 C5orf60A6NFR6 353 aa4.88□□□□□ -1.63
SKP1-208ENST00000521216 FIBPO43427 364 aa4.88□□□□□ -1.63
SKP1-208ENST00000521216 SSX4O60224 188 aa4.88□□□□□ -1.63
SKP1-208ENST00000521216 FGF17O60258 216 aa4.88□□□□□ -1.63
SKP1-208ENST00000521216 GCNT3O95395 438 aa4.88□□□□□ -1.63
SKP1-208ENST00000521216 CTAGE8P0CG41 777 aa4.88□□□□□ -1.63
SKP1-208ENST00000521216 GABRA5P31644 462 aa4.88□□□□□ -1.63
SKP1-208ENST00000521216 RAD52P43351 418 aa4.88□□□□□ -1.63
SKP1-208ENST00000521216 PRKAA1Q13131 559 aa4.88□□□□□ -1.63
SKP1-208ENST00000521216 BECN1Q14457 450 aa4.88□□□□□ -1.63
SKP1-208ENST00000521216 MELKQ14680 651 aa4.88□□□□□ -1.63
SKP1-208ENST00000521216 KIR2DS5Q14953 304 aa4.88□□□□□ -1.63
SKP1-208ENST00000521216 ZRSR1Q15695 479 aaKnown RBP4.88□□□□□ -1.63
SKP1-208ENST00000521216 GCNT6Q5T4J0 391 aa4.88□□□□□ -1.63
SKP1-208ENST00000521216 STPG1Q5TH74 334 aa4.88□□□□□ -1.63
SKP1-208ENST00000521216 BHLHA9Q7RTU4 235 aa4.88□□□□□ -1.63
SKP1-208ENST00000521216 CTAGE4Q8IX94 777 aa4.88□□□□□ -1.63
SKP1-208ENST00000521216 SYT2Q8N9I0 419 aaPredicted RBP4.88□□□□□ -1.63
SKP1-208ENST00000521216 LMNTD1Q8N9Z9 388 aa4.88□□□□□ -1.63
SKP1-208ENST00000521216 AVL9Q8NBF6 648 aa4.88□□□□□ -1.63
SKP1-208ENST00000521216 PTPMT1Q8WUK0 201 aaPredicted RBP4.88□□□□□ -1.63
SKP1-208ENST00000521216 SMPDL3BQ92485 455 aa4.88□□□□□ -1.63
SKP1-208ENST00000521216 ERLEC1Q96DZ1 483 aa4.88□□□□□ -1.63
SKP1-208ENST00000521216 NEUROD6Q96NK8 337 aa4.88□□□□□ -1.63
SKP1-208ENST00000521216 NODALQ96S42 347 aa4.88□□□□□ -1.63
SKP1-208ENST00000521216 MMP27Q9H306 513 aa4.88□□□□□ -1.63
SKP1-208ENST00000521216 SLA2Q9H6Q3 261 aa4.88□□□□□ -1.63
SKP1-208ENST00000521216 HHATLQ9HCP6 504 aa4.88□□□□□ -1.63
SKP1-208ENST00000521216 ZFP57Q9NU63 452 aa4.88□□□□□ -1.63
SKP1-208ENST00000521216 LOC102723996A0A087X1L8 192 aa4.87□□□□□ -1.63
SKP1-208ENST00000521216 GPR75-ASB3A0A0A6YYF3 556 aa4.87□□□□□ -1.63
SKP1-208ENST00000521216 PRSS51A0A1B0GVH4 220 aa4.87□□□□□ -1.63
SKP1-208ENST00000521216 hCG_1809904A0A1W2PP81 198 aa4.87□□□□□ -1.63
SKP1-208ENST00000521216 A0A1W2PPE2 198 aa4.87□□□□□ -1.63
SKP1-208ENST00000521216 A0A1W2PR64 198 aa4.87□□□□□ -1.63
SKP1-208ENST00000521216 GLOD5A6NK44 160 aa4.87□□□□□ -1.63
SKP1-208ENST00000521216 MAGEB17A8MXT2 336 aa4.87□□□□□ -1.63
SKP1-208ENST00000521216 BMPR1BO00238 502 aa4.87□□□□□ -1.63
SKP1-208ENST00000521216 SH2B2O14492 632 aaPredicted RBP4.87□□□□□ -1.63
SKP1-208ENST00000521216 IPO8O15397 1037 aaKnown RBP4.87□□□□□ -1.63
SKP1-208ENST00000521216 ADAM20O43506 726 aa4.87□□□□□ -1.63
SKP1-208ENST00000521216 GPR137BO60478 399 aa4.87□□□□□ -1.63
SKP1-208ENST00000521216 PRAMEF11O60813 436 aa4.87□□□□□ -1.63
SKP1-208ENST00000521216 CTSVO60911 334 aa4.87□□□□□ -1.63
SKP1-208ENST00000521216 IGLV2-11P01706 119 aa4.87□□□□□ -1.63
SKP1-208ENST00000521216 IGHV4-39P01824 125 aa4.87□□□□□ -1.63
SKP1-208ENST00000521216 TPOP07202 933 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms