RNA–Protein interactions for RNA: ENST00000519914.5

SDC2-204, Transcript of syndecan 2, humanhuman

TSL 2 BASIC

Gene SDC2, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-204ENST00000519914 BNIP2Q12982 314 aa5□□□□□ -1.61
SDC2-204ENST00000519914 SEPT6Q14141 434 aa5□□□□□ -1.61
SDC2-204ENST00000519914 SPIDRQ14159 915 aa5□□□□□ -1.61
SDC2-204ENST00000519914 FASTKQ14296 549 aaKnown RBP5□□□□□ -1.61
SDC2-204ENST00000519914 TAF1AQ15573 450 aaPredicted RBP5□□□□□ -1.61
SDC2-204ENST00000519914 SMAD1Q15797 465 aaKnown RBP5□□□□□ -1.61
SDC2-204ENST00000519914 CLPPQ16740 277 aaPredicted RBP5□□□□□ -1.61
SDC2-204ENST00000519914 DDR2Q16832 855 aa5□□□□□ -1.61
SDC2-204ENST00000519914 KRTAP19-4Q3LI73 84 aa5□□□□□ -1.61
SDC2-204ENST00000519914 MMEL1Q495T6 779 aa5□□□□□ -1.61
SDC2-204ENST00000519914 PAN2Q504Q3 1202 aaKnown RBP5□□□□□ -1.61
SDC2-204ENST00000519914 SETMARQ53H47 684 aaPredicted RBP5□□□□□ -1.61
SDC2-204ENST00000519914 XKR7Q5GH72 579 aa5□□□□□ -1.61
SDC2-204ENST00000519914 C6orf10Q5SRN2 563 aa5□□□□□ -1.61
SDC2-204ENST00000519914 SFRP5Q5T4F7 317 aa5□□□□□ -1.61
SDC2-204ENST00000519914 GPR158Q5T848 1215 aa5□□□□□ -1.61
SDC2-204ENST00000519914 NADSYN1Q6IA69 706 aa5□□□□□ -1.61
SDC2-204ENST00000519914 LRFN4Q6PJG9 635 aa5□□□□□ -1.61
SDC2-204ENST00000519914 AFTPHQ6ULP2 937 aa5□□□□□ -1.61
SDC2-204ENST00000519914 ZNF783Q6ZMS7 281 aa5□□□□□ -1.61
SDC2-204ENST00000519914 GK5Q6ZS86 529 aa5□□□□□ -1.61
SDC2-204ENST00000519914 SPATA19Q7Z5L4 167 aa5□□□□□ -1.61
SDC2-204ENST00000519914 ARPINQ7Z6K5 226 aa5□□□□□ -1.61
SDC2-204ENST00000519914 GALNT13Q8IUC8 556 aa5□□□□□ -1.61
SDC2-204ENST00000519914 FUNDC1Q8IVP5 155 aa5□□□□□ -1.61
SDC2-204ENST00000519914 HERC6Q8IVU3 1022 aa5□□□□□ -1.61
SDC2-204ENST00000519914 SCN4BQ8IWT1 228 aa5□□□□□ -1.61
SDC2-204ENST00000519914 AQP12AQ8IXF9 295 aa5□□□□□ -1.61
SDC2-204ENST00000519914 LRRC56Q8IYG6 542 aaPredicted RBP5□□□□□ -1.61
SDC2-204ENST00000519914 BBS5Q8N3I7 341 aa5□□□□□ -1.61
SDC2-204ENST00000519914 NKAPQ8N5F7 415 aaKnown RBP5□□□□□ -1.61
SDC2-204ENST00000519914 CCNYL1Q8N7R7 359 aa5□□□□□ -1.61
SDC2-204ENST00000519914 ANKFN1Q8N957 763 aa5□□□□□ -1.61
SDC2-204ENST00000519914 PDZD8Q8NEN9 1154 aa5□□□□□ -1.61
SDC2-204ENST00000519914 OR4L1Q8NH43 312 aa5□□□□□ -1.61
SDC2-204ENST00000519914 HASPINQ8TF76 798 aa5□□□□□ -1.61
SDC2-204ENST00000519914 DDI1Q8WTU0 396 aa5□□□□□ -1.61
SDC2-204ENST00000519914 LPGAT1Q92604 370 aa5□□□□□ -1.61
SDC2-204ENST00000519914 FBXO32Q969P5 355 aa5□□□□□ -1.61
SDC2-204ENST00000519914 TBRG4Q969Z0 631 aaKnown RBP eCLIP5□□□□□ -1.61
SDC2-204ENST00000519914 PTERQ96BW5 349 aa5□□□□□ -1.61
SDC2-204ENST00000519914 CCDC124Q96CT7 223 aaKnown RBP5□□□□□ -1.61
SDC2-204ENST00000519914 MOCOSQ96EN8 888 aa5□□□□□ -1.61
SDC2-204ENST00000519914 C19orf60Q96EN9 201 aa5□□□□□ -1.61
SDC2-204ENST00000519914 PDLIM5Q96HC4 596 aaKnown RBP5□□□□□ -1.61
SDC2-204ENST00000519914 CDKN2AIPNLQ96HQ2 116 aa5□□□□□ -1.61
SDC2-204ENST00000519914 TBATAQ96M53 351 aa5□□□□□ -1.61
SDC2-204ENST00000519914 LRGUKQ96M69 825 aa5□□□□□ -1.61
SDC2-204ENST00000519914 PRICKLE1Q96MT3 831 aaPredicted RBP5□□□□□ -1.61
SDC2-204ENST00000519914 KLHL32Q96NJ5 620 aa5□□□□□ -1.61
SDC2-204ENST00000519914 GBP5Q96PP8 586 aa5□□□□□ -1.61
SDC2-204ENST00000519914 KLHL5Q96PQ7 755 aa5□□□□□ -1.61
SDC2-204ENST00000519914 NPAS2Q99743 824 aa5□□□□□ -1.61
SDC2-204ENST00000519914 ARPC5LQ9BPX5 153 aa5□□□□□ -1.61
SDC2-204ENST00000519914 MRPS26Q9BYN8 205 aaKnown RBP5□□□□□ -1.61
SDC2-204ENST00000519914 SHCBP1LQ9BZQ2 653 aa5□□□□□ -1.61
SDC2-204ENST00000519914 RBM38Q9H0Z9 239 aaKnown RBP5□□□□□ -1.61
SDC2-204ENST00000519914 NSUN3Q9H649 340 aaKnown RBP5□□□□□ -1.61
SDC2-204ENST00000519914 FBRSQ9HAH7 460 aa5□□□□□ -1.61
SDC2-204ENST00000519914 SPAG4Q9NPE6 437 aa5□□□□□ -1.61
SDC2-204ENST00000519914 SDR39U1Q9NRG7 319 aaPredicted RBP5□□□□□ -1.61
SDC2-204ENST00000519914 CATSPERZQ9NTU4 200 aa5□□□□□ -1.61
SDC2-204ENST00000519914 MARCH5Q9NX47 278 aa5□□□□□ -1.61
SDC2-204ENST00000519914 QPCTLQ9NXS2 382 aa5□□□□□ -1.61
SDC2-204ENST00000519914 GTSE1Q9NYZ3 720 aa5□□□□□ -1.61
SDC2-204ENST00000519914 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5□□□□□ -1.61
SDC2-204ENST00000519914 MARCH2Q9P0N8 246 aa5□□□□□ -1.61
SDC2-204ENST00000519914 MARCH4Q9P2E8 410 aaPredicted RBP5□□□□□ -1.61
SDC2-204ENST00000519914 EPS15L1Q9UBC2 864 aa5□□□□□ -1.61
SDC2-204ENST00000519914 CROTQ9UKG9 612 aa5□□□□□ -1.61
SDC2-204ENST00000519914 GABRQQ9UN88 632 aa5□□□□□ -1.61
SDC2-204ENST00000519914 NDUFAF1Q9Y375 327 aa5□□□□□ -1.61
SDC2-204ENST00000519914 MTF2Q9Y483 593 aaPredicted RBP5□□□□□ -1.61
SDC2-204ENST00000519914 ST14Q9Y5Y6 855 aa5□□□□□ -1.61
SDC2-204ENST00000519914 MICAL3Q7RTP6 2002 aa5□□□□□ -1.61
SDC2-204ENST00000519914 SLC12A8A0AV02 714 aa4.99□□□□□ -1.61
SDC2-204ENST00000519914 CCDC78A2IDD5 438 aa4.99□□□□□ -1.61
SDC2-204ENST00000519914 TYW5A2RUC4 315 aaKnown RBP4.99□□□□□ -1.61
SDC2-204ENST00000519914 EME2A4GXA9 379 aaPredicted RBP4.99□□□□□ -1.61
SDC2-204ENST00000519914 PRORSD1PA6NEY8 169 aa4.99□□□□□ -1.61
SDC2-204ENST00000519914 TRIM64A6NGJ6 449 aa4.99□□□□□ -1.61
SDC2-204ENST00000519914 CAPN8A6NHC0 703 aa4.99□□□□□ -1.61
SDC2-204ENST00000519914 SYCE1LA8MT33 242 aa4.99□□□□□ -1.61
SDC2-204ENST00000519914 E7ENX8 843 aa4.99□□□□□ -1.61
SDC2-204ENST00000519914 F5H5T6 163 aa4.99□□□□□ -1.61
SDC2-204ENST00000519914 MRASO14807 208 aa4.99□□□□□ -1.61
SDC2-204ENST00000519914 AZIN1O14977 448 aa4.99□□□□□ -1.61
SDC2-204ENST00000519914 INSIG1O15503 277 aa4.99□□□□□ -1.61
SDC2-204ENST00000519914 ACSL4O60488 711 aa4.99□□□□□ -1.61
SDC2-204ENST00000519914 GPC4O75487 556 aa4.99□□□□□ -1.61
SDC2-204ENST00000519914 CLDN11O75508 207 aa4.99□□□□□ -1.61
SDC2-204ENST00000519914 SKAP2O75563 359 aaPredicted RBP4.99□□□□□ -1.61
SDC2-204ENST00000519914 RNASEH2AO75792 299 aaKnown RBP4.99□□□□□ -1.61
SDC2-204ENST00000519914 SRP72O76094 671 aaKnown RBP4.99□□□□□ -1.61
SDC2-204ENST00000519914 TNFAIP8O95379 198 aa4.99□□□□□ -1.61
SDC2-204ENST00000519914 CRTAMO95727 393 aa4.99□□□□□ -1.61
SDC2-204ENST00000519914 TSPAN12O95859 305 aa4.99□□□□□ -1.61
SDC2-204ENST00000519914 NPPAP01160 153 aa4.99□□□□□ -1.61
SDC2-204ENST00000519914 PRLP01236 227 aa4.99□□□□□ -1.61
SDC2-204ENST00000519914 PYGLP06737 847 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms