RNA–Protein interactions for RNA: ENST00000518885.1

CNOT7-204, Transcript of CCR4-NOT transcription complex subunit 7, human

TSL 3

Gene CNOT7, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT7-204	ENST00000518885	CCNL2	Q96S94	520 aa	Predicted RBP	23.7	■■□□□ 1.38
CNOT7-204	ENST00000518885	NAP1L3	Q99457	506 aa	Predicted RBP	23.7	■■□□□ 1.38
CNOT7-204	ENST00000518885	ZPBP	Q9BS86	351 aa		23.7	■■□□□ 1.38
CNOT7-204	ENST00000518885	SLC39A1	Q9NY26	324 aa		23.7	■■□□□ 1.38
CNOT7-204	ENST00000518885	TMEM9	Q9P0T7	183 aa		23.7	■■□□□ 1.38
CNOT7-204	ENST00000518885	HEBP2	Q9Y5Z4	205 aa		23.7	■■□□□ 1.38
CNOT7-204	ENST00000518885	C17orf113	A0A1B0GUU1	675 aa		23.69	■■□□□ 1.38
CNOT7-204	ENST00000518885	MROH6	A6NGR9	719 aa		23.69	■■□□□ 1.38
CNOT7-204	ENST00000518885	EFCAB7	A8K855	629 aa		23.69	■■□□□ 1.38
CNOT7-204	ENST00000518885	APRT	P07741	180 aa		23.69	■■□□□ 1.38
CNOT7-204	ENST00000518885	ANKRD34C	P0C6C1	535 aa		23.69	■■□□□ 1.38
CNOT7-204	ENST00000518885	CCL4	P13236	92 aa		23.69	■■□□□ 1.38
CNOT7-204	ENST00000518885	ETV5	P41161	510 aa		23.69	■■□□□ 1.38
CNOT7-204	ENST00000518885	PRLHR	P49683	370 aa		23.69	■■□□□ 1.38
CNOT7-204	ENST00000518885	VAC14	Q08AM6	782 aa		23.69	■■□□□ 1.38
CNOT7-204	ENST00000518885	GPR18	Q14330	331 aa		23.69	■■□□□ 1.38
CNOT7-204	ENST00000518885	NFE2L1	Q14494	772 aa		23.69	■■□□□ 1.38
CNOT7-204	ENST00000518885	RPE65	Q16518	533 aa		23.69	■■□□□ 1.38
CNOT7-204	ENST00000518885	CCDC81	Q6ZN84	652 aa		23.69	■■□□□ 1.38
CNOT7-204	ENST00000518885	ARHGAP22	Q7Z5H3	698 aa		23.69	■■□□□ 1.38
CNOT7-204	ENST00000518885	SERPINA9	Q86WD7	417 aa		23.69	■■□□□ 1.38
CNOT7-204	ENST00000518885	RANBP9	Q96S59	729 aa		23.69	■■□□□ 1.38
CNOT7-204	ENST00000518885	FAM96A	Q9H5X1	160 aa		23.69	■■□□□ 1.38
CNOT7-204	ENST00000518885	EIF2B3	Q9NR50	452 aa	Known RBP	23.69	■■□□□ 1.38
CNOT7-204	ENST00000518885	RIMKLB	Q9ULI2	386 aa		23.69	■■□□□ 1.38
CNOT7-204	ENST00000518885	PSMD13	Q9UNM6	376 aa		23.69	■■□□□ 1.38
CNOT7-204	ENST00000518885	COLEC10	Q9Y6Z7	277 aa		23.69	■■□□□ 1.38
CNOT7-204	ENST00000518885	TRBV5-4	A0A0C4DH59	114 aa		23.68	■■□□□ 1.38
CNOT7-204	ENST00000518885	EIF4E1B	A6NMX2	242 aa	Known RBP	23.68	■■□□□ 1.38
CNOT7-204	ENST00000518885		A8MU76	341 aa		23.68	■■□□□ 1.38
CNOT7-204	ENST00000518885	C9orf172	C9J069	976 aa		23.68	■■□□□ 1.38
CNOT7-204	ENST00000518885	IQCJ-SCHIP1	C9J366	451 aa	Predicted RBP	23.68	■■□□□ 1.38
CNOT7-204	ENST00000518885	AP2A2	O94973	939 aa		23.68	■■□□□ 1.38
CNOT7-204	ENST00000518885	FGF3	P11487	239 aa	Predicted RBP	23.68	■■□□□ 1.38
CNOT7-204	ENST00000518885	MTHFD1	P11586	935 aa	Known RBP	23.68	■■□□□ 1.38
CNOT7-204	ENST00000518885	TYRP1	P17643	537 aa		23.68	■■□□□ 1.38
CNOT7-204	ENST00000518885	ADRA1D	P25100	572 aa		23.68	■■□□□ 1.38
CNOT7-204	ENST00000518885	NDUFS1	P28331	727 aa		23.68	■■□□□ 1.38
CNOT7-204	ENST00000518885	PPARG	P37231	505 aa	Predicted RBP	23.68	■■□□□ 1.38
CNOT7-204	ENST00000518885	CAPZB	P47756	277 aa		23.68	■■□□□ 1.38
CNOT7-204	ENST00000518885	KRT33B	Q14525	404 aa		23.68	■■□□□ 1.38
CNOT7-204	ENST00000518885	CLCA4	Q14CN2	919 aa		23.68	■■□□□ 1.38
CNOT7-204	ENST00000518885	PLCL1	Q15111	1095 aa		23.68	■■□□□ 1.38
CNOT7-204	ENST00000518885	PPHLN1	Q8NEY8	458 aa	Known RBP	23.68	■■□□□ 1.38
CNOT7-204	ENST00000518885	PEX13	Q92968	403 aa		23.68	■■□□□ 1.38
CNOT7-204	ENST00000518885	ART4	Q93070	314 aa		23.68	■■□□□ 1.38
CNOT7-204	ENST00000518885	IMP3	Q9NV31	184 aa	Known RBP	23.68	■■□□□ 1.38
CNOT7-204	ENST00000518885	PIH1D1	Q9NWS0	290 aa	Known RBP	23.68	■■□□□ 1.38
CNOT7-204	ENST00000518885	KLHL3	Q9UH77	587 aa		23.68	■■□□□ 1.38
CNOT7-204	ENST00000518885	RALY	Q9UKM9	306 aa	Known RBP	23.68	■■□□□ 1.38
CNOT7-204	ENST00000518885	WDR37	Q9Y2I8	494 aa		23.68	■■□□□ 1.38
CNOT7-204	ENST00000518885	SSUH2	Q9Y2M2	353 aa		23.68	■■□□□ 1.38
CNOT7-204	ENST00000518885	ZFYVE26	Q68DK2	2539 aa		23.68	■■□□□ 1.38
CNOT7-204	ENST00000518885	IGLV3-16	A0A075B6K0	115 aa		23.67	■■□□□ 1.38
CNOT7-204	ENST00000518885	PSMA3	P25788	255 aa		23.67	■■□□□ 1.38
CNOT7-204	ENST00000518885	CA5A	P35218	305 aa		23.67	■■□□□ 1.38
CNOT7-204	ENST00000518885	NSG1	P42857	185 aa		23.67	■■□□□ 1.38
CNOT7-204	ENST00000518885	ATP1A2	P50993	1020 aa		23.67	■■□□□ 1.38
CNOT7-204	ENST00000518885	ITIH4	Q14624	930 aa		23.67	■■□□□ 1.38
CNOT7-204	ENST00000518885	GSE1	Q14687	1217 aa		23.67	■■□□□ 1.38
CNOT7-204	ENST00000518885	KIF26B	Q2KJY2	2108 aa		23.67	■■□□□ 1.38
CNOT7-204	ENST00000518885	CEACAM20	Q6UY09	585 aa		23.67	■■□□□ 1.38
CNOT7-204	ENST00000518885	FAM83H	Q6ZRV2	1179 aa	Predicted RBP	23.67	■■□□□ 1.38
CNOT7-204	ENST00000518885	CFAP206	Q8IYR0	622 aa		23.67	■■□□□ 1.38
CNOT7-204	ENST00000518885	CRELD1	Q96HD1	420 aa		23.67	■■□□□ 1.38
CNOT7-204	ENST00000518885	PBK	Q96KB5	322 aa		23.67	■■□□□ 1.38
CNOT7-204	ENST00000518885	C9orf72	Q96LT7	481 aa		23.67	■■□□□ 1.38
CNOT7-204	ENST00000518885	RAB33B	Q9H082	229 aa		23.67	■■□□□ 1.38
CNOT7-204	ENST00000518885	WWP1	Q9H0M0	922 aa		23.67	■■□□□ 1.38
CNOT7-204	ENST00000518885	FOXJ2	Q9P0K8	574 aa		23.67	■■□□□ 1.38
CNOT7-204	ENST00000518885	IFRD1	O00458	451 aa	Predicted RBP	23.66	■■□□□ 1.38
CNOT7-204	ENST00000518885	CCL22	O00626	93 aa		23.66	■■□□□ 1.38
CNOT7-204	ENST00000518885	CAPN5	O15484	640 aa	Predicted RBP	23.66	■■□□□ 1.38
CNOT7-204	ENST00000518885	RASSF9	O75901	435 aa		23.66	■■□□□ 1.38
CNOT7-204	ENST00000518885	C9	P02748	559 aa		23.66	■■□□□ 1.38
CNOT7-204	ENST00000518885	RHD	Q02161	417 aa		23.66	■■□□□ 1.38
CNOT7-204	ENST00000518885	SIX1	Q15475	284 aa	Predicted RBP	23.66	■■□□□ 1.38
CNOT7-204	ENST00000518885	MANEA	Q5SRI9	462 aa		23.66	■■□□□ 1.38
CNOT7-204	ENST00000518885	AFTPH	Q6ULP2	937 aa		23.66	■■□□□ 1.38
CNOT7-204	ENST00000518885	CERS6	Q6ZMG9	384 aa		23.66	■■□□□ 1.38
CNOT7-204	ENST00000518885	ZSCAN1	Q8NBB4	408 aa		23.66	■■□□□ 1.38
CNOT7-204	ENST00000518885	LSM14A	Q8ND56	463 aa	Known RBP	23.66	■■□□□ 1.38
CNOT7-204	ENST00000518885	C12orf66	Q96MD2	445 aa		23.66	■■□□□ 1.38
CNOT7-204	ENST00000518885	TGM7	Q96PF1	710 aa		23.66	■■□□□ 1.38
CNOT7-204	ENST00000518885	CASS4	Q9NQ75	786 aa		23.66	■■□□□ 1.38
CNOT7-204	ENST00000518885	FBXO8	Q9NRD0	319 aa		23.66	■■□□□ 1.38
CNOT7-204	ENST00000518885	FAM8A1	Q9UBU6	413 aa		23.66	■■□□□ 1.38
CNOT7-204	ENST00000518885	EPHA6	Q9UF33	1036 aa		23.66	■■□□□ 1.38
CNOT7-204	ENST00000518885	CXCR5	P32302	372 aa		23.65	■■□□□ 1.38
CNOT7-204	ENST00000518885	RPL22	P35268	128 aa	Known RBP	23.65	■■□□□ 1.38
CNOT7-204	ENST00000518885	PRAME	P78395	509 aa		23.65	■■□□□ 1.38
CNOT7-204	ENST00000518885	BASP1	P80723	227 aa	Known RBP	23.65	■■□□□ 1.38
CNOT7-204	ENST00000518885	CDK16	Q00536	496 aa		23.65	■■□□□ 1.38
CNOT7-204	ENST00000518885	MC2R	Q01718	297 aa		23.65	■■□□□ 1.38
CNOT7-204	ENST00000518885	RPA4	Q13156	261 aa		23.65	■■□□□ 1.38
CNOT7-204	ENST00000518885	TSTD2	Q5T7W7	516 aa		23.65	■■□□□ 1.38
CNOT7-204	ENST00000518885	ARHGAP40	Q5TG30	622 aa		23.65	■■□□□ 1.38
CNOT7-204	ENST00000518885	SNRNP27	Q8WVK2	155 aa	Known RBP	23.65	■■□□□ 1.38
CNOT7-204	ENST00000518885	CPNE5	Q9HCH3	593 aa		23.65	■■□□□ 1.38
CNOT7-204	ENST00000518885	OCIAD1	Q9NX40	245 aa		23.65	■■□□□ 1.38

Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms