RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 TIFAQ96CG3 184 aa14.71□□□□□ -0.06
VCAN-211ENST00000513984 VPS35Q96QK1 796 aa14.71□□□□□ -0.06
VCAN-211ENST00000513984 AKTIPQ9H8T0 292 aa14.71□□□□□ -0.06
VCAN-211ENST00000513984 PPM1HQ9ULR3 514 aa14.71□□□□□ -0.06
VCAN-211ENST00000513984 ATP6AP2A0A1C7CYW4 349 aa14.7□□□□□ -0.06
VCAN-211ENST00000513984 FADS2P1A8MWK0 482 aa14.7□□□□□ -0.06
VCAN-211ENST00000513984 CFAP99D6REC4 459 aa14.7□□□□□ -0.06
VCAN-211ENST00000513984 H0Y858 1186 aa14.7□□□□□ -0.06
VCAN-211ENST00000513984 RFXAPO00287 272 aa14.7□□□□□ -0.06
VCAN-211ENST00000513984 GIPC1O14908 333 aa14.7□□□□□ -0.06
VCAN-211ENST00000513984 SPINT1O43278 529 aa14.7□□□□□ -0.06
VCAN-211ENST00000513984 CCNT2O60583 730 aaKnown RBP14.7□□□□□ -0.06
VCAN-211ENST00000513984 VPS4BO75351 444 aa14.7□□□□□ -0.06
VCAN-211ENST00000513984 ATP6AP2O75787 350 aa14.7□□□□□ -0.06
VCAN-211ENST00000513984 AP2A2O94973 939 aa14.7□□□□□ -0.06
VCAN-211ENST00000513984 ELFN1P0C7U0 828 aa14.7□□□□□ -0.06
VCAN-211ENST00000513984 HLA-EP13747 358 aa14.7□□□□□ -0.06
VCAN-211ENST00000513984 VCLP18206 1134 aa14.7□□□□□ -0.06
VCAN-211ENST00000513984 AKT1P31749 480 aa14.7□□□□□ -0.06
VCAN-211ENST00000513984 NUDT2P50583 147 aa14.7□□□□□ -0.06
VCAN-211ENST00000513984 RUNX3Q13761 415 aa14.7□□□□□ -0.06
VCAN-211ENST00000513984 ELAVL3Q14576 367 aaKnown RBP14.7□□□□□ -0.06
VCAN-211ENST00000513984 MAPRE2Q15555 327 aa14.7□□□□□ -0.06
VCAN-211ENST00000513984 ZRSR2Q15696 482 aaKnown RBP14.7□□□□□ -0.06
VCAN-211ENST00000513984 PHKG1Q16816 387 aa14.7□□□□□ -0.06
VCAN-211ENST00000513984 ZNF284Q2VY69 593 aa14.7□□□□□ -0.06
VCAN-211ENST00000513984 POM121L1PQ3SYA9 428 aa14.7□□□□□ -0.06
VCAN-211ENST00000513984 KHDC1Q4VXA5 237 aaKnown RBP14.7□□□□□ -0.06
VCAN-211ENST00000513984 METTL2BQ6P1Q9 378 aaKnown RBP14.7□□□□□ -0.06
VCAN-211ENST00000513984 NRSN1Q8IZ57 195 aa14.7□□□□□ -0.06
VCAN-211ENST00000513984 ST13P5Q8NFI4 369 aaPredicted RBP14.7□□□□□ -0.06
VCAN-211ENST00000513984 CFAP61Q8NHU2 1237 aa14.7□□□□□ -0.06
VCAN-211ENST00000513984 PIP4K2CQ8TBX8 421 aa14.7□□□□□ -0.06
VCAN-211ENST00000513984 DCUN1D1Q96GG9 259 aa14.7□□□□□ -0.06
VCAN-211ENST00000513984 RIOK2Q9BVS4 552 aaKnown RBP14.7□□□□□ -0.06
VCAN-211ENST00000513984 NSUN3Q9H649 340 aaKnown RBP14.7□□□□□ -0.06
VCAN-211ENST00000513984 DCLRE1BQ9H816 532 aa14.7□□□□□ -0.06
VCAN-211ENST00000513984 SUN2Q9UH99 717 aa14.7□□□□□ -0.06
VCAN-211ENST00000513984 MBD1Q9UIS9 605 aaPredicted RBP14.7□□□□□ -0.06
VCAN-211ENST00000513984 L3MBTL1Q9Y468 752 aa14.7□□□□□ -0.06
VCAN-211ENST00000513984 PTGDR2Q9Y5Y4 395 aa14.7□□□□□ -0.06
VCAN-211ENST00000513984 ST14Q9Y5Y6 855 aa14.7□□□□□ -0.06
VCAN-211ENST00000513984 C5orf42Q9H799 3197 aa14.7□□□□□ -0.06
VCAN-211ENST00000513984 TAPBPO15533 448 aa14.69□□□□□ -0.06
VCAN-211ENST00000513984 NUAK1O60285 661 aa14.69□□□□□ -0.06
VCAN-211ENST00000513984 CRCPO75575 148 aa14.69□□□□□ -0.06
VCAN-211ENST00000513984 ALDOCP09972 364 aaKnown RBP14.69□□□□□ -0.06
VCAN-211ENST00000513984 GRIN2CQ14957 1233 aa14.69□□□□□ -0.06
VCAN-211ENST00000513984 XKR7Q5GH72 579 aa14.69□□□□□ -0.06
VCAN-211ENST00000513984 CDKL4Q5MAI5 379 aa14.69□□□□□ -0.06
VCAN-211ENST00000513984 PLEKHS1Q5SXH7 462 aa14.69□□□□□ -0.06
VCAN-211ENST00000513984 C6orf163Q5TEZ5 329 aa14.69□□□□□ -0.06
VCAN-211ENST00000513984 SULT1C3Q6IMI6 304 aa14.69□□□□□ -0.06
VCAN-211ENST00000513984 C16orf89Q6UX73 402 aa14.69□□□□□ -0.06
VCAN-211ENST00000513984 GOLGA7Q7Z5G4 137 aa14.69□□□□□ -0.06
VCAN-211ENST00000513984 SFTPA1Q8IWL2 248 aa14.69□□□□□ -0.06
VCAN-211ENST00000513984 DDIASQ8IXT1 998 aa14.69□□□□□ -0.06
VCAN-211ENST00000513984 KYQ8NBH2 561 aa14.69□□□□□ -0.06
VCAN-211ENST00000513984 ARRDC3Q96B67 414 aa14.69□□□□□ -0.06
VCAN-211ENST00000513984 RCN3Q96D15 328 aa14.69□□□□□ -0.06
VCAN-211ENST00000513984 NKX1-2Q9UD57 310 aaPredicted RBP14.69□□□□□ -0.06
VCAN-211ENST00000513984 POLG2Q9UHN1 485 aa14.69□□□□□ -0.06
VCAN-211ENST00000513984 REV3LO60673 3130 aa14.69□□□□□ -0.06
VCAN-211ENST00000513984 PSMD12O00232 456 aaPredicted RBP14.69□□□□□ -0.06
VCAN-211ENST00000513984 AIM2O14862 343 aa14.69□□□□□ -0.06
VCAN-211ENST00000513984 KPNA5O15131 536 aa14.69□□□□□ -0.06
VCAN-211ENST00000513984 SGTAO43765 313 aa14.69□□□□□ -0.06
VCAN-211ENST00000513984 CHEK2O96017 543 aa14.69□□□□□ -0.06
VCAN-211ENST00000513984 PRR35P0CG20 571 aa14.69□□□□□ -0.06
VCAN-211ENST00000513984 MPC1LP0DKB6 136 aa14.69□□□□□ -0.06
VCAN-211ENST00000513984 GJA4P35212 333 aa14.69□□□□□ -0.06
VCAN-211ENST00000513984 EIF2DP41214 584 aaKnown RBP14.69□□□□□ -0.06
VCAN-211ENST00000513984 METAP1P53582 386 aa14.69□□□□□ -0.06
VCAN-211ENST00000513984 ACTR3P61158 418 aa14.69□□□□□ -0.06
VCAN-211ENST00000513984 IRX1P78414 480 aaPredicted RBP14.69□□□□□ -0.06
VCAN-211ENST00000513984 TBL3Q12788 808 aaKnown RBP14.69□□□□□ -0.06
VCAN-211ENST00000513984 GTF2H2Q13888 395 aa14.69□□□□□ -0.06
VCAN-211ENST00000513984 FASTKQ14296 549 aaKnown RBP14.69□□□□□ -0.06
VCAN-211ENST00000513984 C18orf21Q32NC0 220 aaPredicted RBP14.69□□□□□ -0.06
VCAN-211ENST00000513984 NAIF1Q69YI7 327 aaPredicted RBP14.69□□□□□ -0.06
VCAN-211ENST00000513984 OGFOD2Q6N063 350 aa14.69□□□□□ -0.06
VCAN-211ENST00000513984 GTF2H2CQ6P1K8 395 aa14.69□□□□□ -0.06
VCAN-211ENST00000513984 RIPOR1Q6ZS17 1223 aa14.69□□□□□ -0.06
VCAN-211ENST00000513984 DET1Q7L5Y6 550 aa14.69□□□□□ -0.06
VCAN-211ENST00000513984 CYP2U1Q7Z449 544 aa14.69□□□□□ -0.06
VCAN-211ENST00000513984 CHCHD4Q8N4Q1 142 aa14.69□□□□□ -0.06
VCAN-211ENST00000513984 OR52B6Q8NGF0 335 aa14.69□□□□□ -0.06
VCAN-211ENST00000513984 UCMAQ8WVF2 138 aa14.69□□□□□ -0.06
VCAN-211ENST00000513984 BTN2A2Q8WVV5 523 aa14.69□□□□□ -0.06
VCAN-211ENST00000513984 RHBDF1Q96CC6 855 aa14.69□□□□□ -0.06
VCAN-211ENST00000513984 COQ10AQ96MF6 247 aa14.69□□□□□ -0.06
VCAN-211ENST00000513984 FAM129BQ96TA1 746 aa14.69□□□□□ -0.06
VCAN-211ENST00000513984 CCT7Q99832 543 aa14.69□□□□□ -0.06
VCAN-211ENST00000513984 TMEM79Q9BSE2 394 aa14.69□□□□□ -0.06
VCAN-211ENST00000513984 EFCAB1Q9HAE3 211 aa14.69□□□□□ -0.06
VCAN-211ENST00000513984 FBRSL1Q9HCM7 1045 aaKnown RBP14.69□□□□□ -0.06
VCAN-211ENST00000513984 NDE1Q9NXR1 346 aa14.69□□□□□ -0.06
VCAN-211ENST00000513984 PRPF19Q9UMS4 504 aaKnown RBP14.69□□□□□ -0.06
VCAN-211ENST00000513984 ITM2BQ9Y287 266 aa14.69□□□□□ -0.06
VCAN-211ENST00000513984 BTRCQ9Y297 605 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms