RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 CNOT2Q9NZN8 540 aaKnown RBP6.21□□□□□ -1.42
TRAPPC11-209ENST00000512476 BTBD7Q9P203 1132 aa6.21□□□□□ -1.42
TRAPPC11-209ENST00000512476 DNMT3BQ9UBC3 853 aaKnown RBP6.21□□□□□ -1.42
TRAPPC11-209ENST00000512476 AMFRQ9UKV5 643 aa6.21□□□□□ -1.42
TRAPPC11-209ENST00000512476 TMEM184BQ9Y519 407 aaPredicted RBP6.21□□□□□ -1.42
TRAPPC11-209ENST00000512476 NPHP3Q7Z494 1330 aa6.2□□□□□ -1.42
TRAPPC11-209ENST00000512476 OVOS2A0A0J9YW53 1432 aa6.2□□□□□ -1.42
TRAPPC11-209ENST00000512476 OVOS2Q6IE36 1432 aa6.2□□□□□ -1.42
TRAPPC11-209ENST00000512476 MAGEA13PA6NCF6 341 aa6.2□□□□□ -1.42
TRAPPC11-209ENST00000512476 WASH4PA8MWX3 477 aa6.2□□□□□ -1.42
TRAPPC11-209ENST00000512476 M0QZQ0 153 aa6.2□□□□□ -1.42
TRAPPC11-209ENST00000512476 N4BP3O15049 544 aa6.2□□□□□ -1.42
TRAPPC11-209ENST00000512476 GH1P01241 217 aa6.2□□□□□ -1.42
TRAPPC11-209ENST00000512476 RLN1P04808 185 aa6.2□□□□□ -1.42
TRAPPC11-209ENST00000512476 KRT8P05787 483 aa6.2□□□□□ -1.42
TRAPPC11-209ENST00000512476 COX7A2P14406 83 aa6.2□□□□□ -1.42
TRAPPC11-209ENST00000512476 ITGB6P18564 788 aa6.2□□□□□ -1.42
TRAPPC11-209ENST00000512476 PTNP21246 168 aa6.2□□□□□ -1.42
TRAPPC11-209ENST00000512476 POU1F1P28069 291 aa6.2□□□□□ -1.42
TRAPPC11-209ENST00000512476 CPOXP36551 454 aa6.2□□□□□ -1.42
TRAPPC11-209ENST00000512476 HNRNPFP52597 415 aaKnown RBP6.2□□□□□ -1.42
TRAPPC11-209ENST00000512476 CABP4P57796 275 aa6.2□□□□□ -1.42
TRAPPC11-209ENST00000512476 VBP1P61758 197 aa6.2□□□□□ -1.42
TRAPPC11-209ENST00000512476 SKP1P63208 163 aa6.2□□□□□ -1.42
TRAPPC11-209ENST00000512476 CNTN2Q02246 1040 aa6.2□□□□□ -1.42
TRAPPC11-209ENST00000512476 NIPAL4Q0D2K0 466 aa6.2□□□□□ -1.42
TRAPPC11-209ENST00000512476 TMEM62Q0P6H9 643 aa6.2□□□□□ -1.42
TRAPPC11-209ENST00000512476 RIN1Q13671 783 aa6.2□□□□□ -1.42
TRAPPC11-209ENST00000512476 RBBP5Q15291 538 aaKnown RBP6.2□□□□□ -1.42
TRAPPC11-209ENST00000512476 MST1LQ2TV78 715 aa6.2□□□□□ -1.42
TRAPPC11-209ENST00000512476 LIPIQ6XZB0 460 aa6.2□□□□□ -1.42
TRAPPC11-209ENST00000512476 PM20D2Q8IYS1 436 aa6.2□□□□□ -1.42
TRAPPC11-209ENST00000512476 SELENOHQ8IZQ5 122 aaKnown RBP6.2□□□□□ -1.42
TRAPPC11-209ENST00000512476 ASB11Q8WXH4 323 aa6.2□□□□□ -1.42
TRAPPC11-209ENST00000512476 GFM2Q969S9 779 aaKnown RBP6.2□□□□□ -1.42
TRAPPC11-209ENST00000512476 BSCL2Q96G97 398 aaPredicted RBP6.2□□□□□ -1.42
TRAPPC11-209ENST00000512476 GPR87Q9BY21 358 aa6.2□□□□□ -1.42
TRAPPC11-209ENST00000512476 RNPEPL1Q9HAU8 725 aa6.2□□□□□ -1.42
TRAPPC11-209ENST00000512476 YAE1D1Q9NRH1 226 aa6.2□□□□□ -1.42
TRAPPC11-209ENST00000512476 PIGVQ9NUD9 493 aa6.2□□□□□ -1.42
TRAPPC11-209ENST00000512476 DDX28Q9NUL7 540 aaKnown RBP6.2□□□□□ -1.42
TRAPPC11-209ENST00000512476 PAG1Q9NWQ8 432 aa6.2□□□□□ -1.42
TRAPPC11-209ENST00000512476 AHSPQ9NZD4 102 aa6.2□□□□□ -1.42
TRAPPC11-209ENST00000512476 HCN3Q9P1Z3 774 aa6.2□□□□□ -1.42
TRAPPC11-209ENST00000512476 CTSFQ9UBX1 484 aa6.2□□□□□ -1.42
TRAPPC11-209ENST00000512476 LEF1Q9UJU2 399 aaPredicted RBP6.2□□□□□ -1.42
TRAPPC11-209ENST00000512476 AATKQ6ZMQ8 1374 aa6.2□□□□□ -1.42
TRAPPC11-209ENST00000512476 PNPLA6Q8IY17 1366 aa6.2□□□□□ -1.42
TRAPPC11-209ENST00000512476 SMG6Q86US8 1419 aaKnown RBP6.2□□□□□ -1.42
TRAPPC11-209ENST00000512476 SAC3D1A6NKF1 404 aa6.2□□□□□ -1.42
TRAPPC11-209ENST00000512476 CCNT1O60563 726 aaKnown RBP6.2□□□□□ -1.42
TRAPPC11-209ENST00000512476 CBFA2T3O75081 653 aa6.2□□□□□ -1.42
TRAPPC11-209ENST00000512476 RBBP9O75884 186 aa6.2□□□□□ -1.42
TRAPPC11-209ENST00000512476 KDM4BO94953 1096 aa6.2□□□□□ -1.42
TRAPPC11-209ENST00000512476 TRUB2O95900 331 aaKnown RBP6.2□□□□□ -1.42
TRAPPC11-209ENST00000512476 OPN1LWP04000 364 aa6.2□□□□□ -1.42
TRAPPC11-209ENST00000512476 CSF2P04141 144 aa6.2□□□□□ -1.42
TRAPPC11-209ENST00000512476 NID1P14543 1247 aa6.2□□□□□ -1.42
TRAPPC11-209ENST00000512476 DLSTP36957 453 aa6.2□□□□□ -1.42
TRAPPC11-209ENST00000512476 MAGEB1P43366 347 aa6.2□□□□□ -1.42
TRAPPC11-209ENST00000512476 ARHGDIAP52565 204 aa6.2□□□□□ -1.42
TRAPPC11-209ENST00000512476 ACSM1Q08AH1 577 aa6.2□□□□□ -1.42
TRAPPC11-209ENST00000512476 DMWDQ09019 674 aa6.2□□□□□ -1.42
TRAPPC11-209ENST00000512476 MTM1Q13496 603 aa6.2□□□□□ -1.42
TRAPPC11-209ENST00000512476 AP5B1Q2VPB7 878 aa6.2□□□□□ -1.42
TRAPPC11-209ENST00000512476 P3H1Q32P28 736 aa6.2□□□□□ -1.42
TRAPPC11-209ENST00000512476 PAGE2BQ5JRK9 111 aa6.2□□□□□ -1.42
TRAPPC11-209ENST00000512476 ATF7IP2Q5U623 682 aa6.2□□□□□ -1.42
TRAPPC11-209ENST00000512476 PQLC1Q8N2U9 271 aa6.2□□□□□ -1.42
TRAPPC11-209ENST00000512476 CDYL2Q8N8U2 506 aa6.2□□□□□ -1.42
TRAPPC11-209ENST00000512476 PSMA8Q8TAA3 256 aa6.2□□□□□ -1.42
TRAPPC11-209ENST00000512476 ARRDC3Q96B67 414 aa6.2□□□□□ -1.42
TRAPPC11-209ENST00000512476 RPGRIP1Q96KN7 1286 aa6.2□□□□□ -1.42
TRAPPC11-209ENST00000512476 SH3GL3Q99963 347 aa6.2□□□□□ -1.42
TRAPPC11-209ENST00000512476 ABHD6Q9BV23 337 aa6.2□□□□□ -1.42
TRAPPC11-209ENST00000512476 BLZF1Q9H2G9 400 aa6.2□□□□□ -1.42
TRAPPC11-209ENST00000512476 SLC6A20Q9NP91 592 aa6.2□□□□□ -1.42
TRAPPC11-209ENST00000512476 PADI2Q9Y2J8 665 aa6.2□□□□□ -1.42
TRAPPC11-209ENST00000512476 UBE4BO95155 1302 aa6.2□□□□□ -1.42
TRAPPC11-209ENST00000512476 NCOA3Q9Y6Q9 1424 aa6.19□□□□□ -1.42
TRAPPC11-209ENST00000512476 EFCAB8A8MWE9 144 aa6.19□□□□□ -1.42
TRAPPC11-209ENST00000512476 H3BQ06 376 aaPredicted RBP6.19□□□□□ -1.42
TRAPPC11-209ENST00000512476 M0QYG6 137 aa6.19□□□□□ -1.42
TRAPPC11-209ENST00000512476 HAS3O00219 553 aa6.19□□□□□ -1.42
TRAPPC11-209ENST00000512476 ABCD4O14678 606 aa6.19□□□□□ -1.42
TRAPPC11-209ENST00000512476 TERTO14746 1132 aaKnown RBP6.19□□□□□ -1.42
TRAPPC11-209ENST00000512476 DYNC1LI2O43237 492 aaPredicted RBP6.19□□□□□ -1.42
TRAPPC11-209ENST00000512476 TBX19O60806 448 aa6.19□□□□□ -1.42
TRAPPC11-209ENST00000512476 MITFO75030 526 aaPredicted RBP6.19□□□□□ -1.42
TRAPPC11-209ENST00000512476 GPR32O75388 356 aa6.19□□□□□ -1.42
TRAPPC11-209ENST00000512476 FTH1P19P0C7X4 201 aa6.19□□□□□ -1.42
TRAPPC11-209ENST00000512476 HGFP14210 728 aa6.19□□□□□ -1.42
TRAPPC11-209ENST00000512476 IL7RP16871 459 aa6.19□□□□□ -1.42
TRAPPC11-209ENST00000512476 CD1BP29016 333 aa6.19□□□□□ -1.42
TRAPPC11-209ENST00000512476 CSNK1EP49674 416 aaKnown RBP6.19□□□□□ -1.42
TRAPPC11-209ENST00000512476 HNRNPKP61978 463 aaKnown RBP eCLIP6.19□□□□□ -1.42
TRAPPC11-209ENST00000512476 B4GALNT1Q00973 533 aa6.19□□□□□ -1.42
TRAPPC11-209ENST00000512476 KRT31Q15323 416 aa6.19□□□□□ -1.42
TRAPPC11-209ENST00000512476 PTCHD3Q3KNS1 767 aa6.19□□□□□ -1.42
TRAPPC11-209ENST00000512476 SARM1Q6SZW1 724 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms