RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 ELOAQ14241 798 aaKnown RBP18.54■□□□□ 0.56
HMGCS1-206ENST00000511774 IGFL3Q6UXB1 125 aa18.54■□□□□ 0.56
HMGCS1-206ENST00000511774 APTXQ7Z2E3 356 aaKnown RBP18.54■□□□□ 0.56
HMGCS1-206ENST00000511774 ZNF571Q7Z3V5 609 aaPredicted RBP18.54■□□□□ 0.56
HMGCS1-206ENST00000511774 MRGPREQ86SM8 312 aa18.54■□□□□ 0.56
HMGCS1-206ENST00000511774 TRAPPC5Q8IUR0 188 aa18.54■□□□□ 0.56
HMGCS1-206ENST00000511774 SYTL1Q8IYJ3 562 aa18.54■□□□□ 0.56
HMGCS1-206ENST00000511774 CNTD1Q8N815 330 aa18.54■□□□□ 0.56
HMGCS1-206ENST00000511774 ST6GALNAC3Q8NDV1 305 aa18.54■□□□□ 0.56
HMGCS1-206ENST00000511774 OR1L3Q8NH93 324 aa18.54■□□□□ 0.56
HMGCS1-206ENST00000511774 MOCOSQ96EN8 888 aa18.54■□□□□ 0.56
HMGCS1-206ENST00000511774 TSGA13Q96PP4 275 aa18.54■□□□□ 0.56
HMGCS1-206ENST00000511774 CD180Q99467 661 aa18.54■□□□□ 0.56
HMGCS1-206ENST00000511774 HRASLS2Q9NWW9 162 aa18.54■□□□□ 0.56
HMGCS1-206ENST00000511774 BTRCQ9Y297 605 aa18.54■□□□□ 0.56
HMGCS1-206ENST00000511774 DDX3XO00571 662 aaKnown RBP eCLIP18.53■□□□□ 0.567e-28■■□□□ 11.4
HMGCS1-206ENST00000511774 AURKAO14965 403 aa18.53■□□□□ 0.56
HMGCS1-206ENST00000511774 ZBTB11O95625 1053 aaPredicted RBP18.53■□□□□ 0.56
HMGCS1-206ENST00000511774 CA4P22748 312 aa18.53■□□□□ 0.56
HMGCS1-206ENST00000511774 CCNCP24863 283 aa18.53■□□□□ 0.56
HMGCS1-206ENST00000511774 CTSCP53634 463 aa18.53■□□□□ 0.56
HMGCS1-206ENST00000511774 RRADP55042 308 aa18.53■□□□□ 0.56
HMGCS1-206ENST00000511774 FOXL2P58012 376 aa18.53■□□□□ 0.56
HMGCS1-206ENST00000511774 SLC10A2Q12908 348 aaPredicted RBP18.53■□□□□ 0.56
HMGCS1-206ENST00000511774 BECN1Q14457 450 aa18.53■□□□□ 0.56
HMGCS1-206ENST00000511774 NCF4Q15080 339 aa18.53■□□□□ 0.56
HMGCS1-206ENST00000511774 PAFAH1B3Q15102 231 aaKnown RBP18.53■□□□□ 0.56
HMGCS1-206ENST00000511774 PLCL1Q15111 1095 aa18.53■□□□□ 0.56
HMGCS1-206ENST00000511774 LLGL1Q15334 1064 aa18.53■□□□□ 0.56
HMGCS1-206ENST00000511774 ATP13A5Q4VNC0 1218 aa18.53■□□□□ 0.56
HMGCS1-206ENST00000511774 ATP13A4Q4VNC1 1196 aa18.53■□□□□ 0.56
HMGCS1-206ENST00000511774 PDPK2PQ6A1A2 396 aa18.53■□□□□ 0.56
HMGCS1-206ENST00000511774 KCNMB4Q86W47 210 aa18.53■□□□□ 0.56
HMGCS1-206ENST00000511774 CPNE8Q86YQ8 564 aa18.53■□□□□ 0.56
HMGCS1-206ENST00000511774 OR8K5Q8NH50 307 aa18.53■□□□□ 0.56
HMGCS1-206ENST00000511774 FAM71BQ8TC56 605 aa18.53■□□□□ 0.56
HMGCS1-206ENST00000511774 TEKT4Q8WW24 435 aa18.53■□□□□ 0.56
HMGCS1-206ENST00000511774 CPT1BQ92523 772 aa18.53■□□□□ 0.56
HMGCS1-206ENST00000511774 FATE1Q969F0 183 aa18.53■□□□□ 0.56
HMGCS1-206ENST00000511774 CLIP3Q96DZ5 547 aa18.53■□□□□ 0.56
HMGCS1-206ENST00000511774 SGSM3Q96HU1 749 aa18.53■□□□□ 0.56
HMGCS1-206ENST00000511774 ILKAPQ9H0C8 392 aaPredicted RBP18.53■□□□□ 0.56
HMGCS1-206ENST00000511774 LIMA1Q9UHB6 759 aaKnown RBP18.53■□□□□ 0.56
HMGCS1-206ENST00000511774 AMACRQ9UHK6 382 aa18.53■□□□□ 0.56
HMGCS1-206ENST00000511774 OSGIN2Q9Y236 505 aa18.53■□□□□ 0.56
HMGCS1-206ENST00000511774 ZNF711Q9Y462 761 aa18.53■□□□□ 0.56
HMGCS1-206ENST00000511774 GPR39O43194 453 aa18.52■□□□□ 0.56
HMGCS1-206ENST00000511774 KLF7O75840 302 aaPredicted RBP18.52■□□□□ 0.56
HMGCS1-206ENST00000511774 OTX2P32243 289 aa18.52■□□□□ 0.56
HMGCS1-206ENST00000511774 GLRBP48167 497 aa18.52■□□□□ 0.56
HMGCS1-206ENST00000511774 UBXN1Q04323 297 aa18.52■□□□□ 0.56
HMGCS1-206ENST00000511774 TMEM115Q12893 351 aaPredicted RBP18.52■□□□□ 0.56
HMGCS1-206ENST00000511774 ZBTB17Q13105 803 aa18.52■□□□□ 0.56
HMGCS1-206ENST00000511774 NFE2L1Q14494 772 aa18.52■□□□□ 0.56
HMGCS1-206ENST00000511774 IFI16Q16666 785 aaKnown RBP18.52■□□□□ 0.56
HMGCS1-206ENST00000511774 ZNF385CQ66K41 422 aaPredicted RBP18.52■□□□□ 0.56
HMGCS1-206ENST00000511774 HGSNATQ68CP4 663 aa18.52■□□□□ 0.56
HMGCS1-206ENST00000511774 Q6ZS92 163 aa18.52■□□□□ 0.56
HMGCS1-206ENST00000511774 NRTNQ99748 197 aa18.52■□□□□ 0.56
HMGCS1-206ENST00000511774 SOHLH2Q9NX45 425 aa18.52■□□□□ 0.56
HMGCS1-206ENST00000511774 SPO11Q9Y5K1 396 aa18.52■□□□□ 0.56
HMGCS1-206ENST00000511774 NUP210LQ5VU65 1888 aa18.52■□□□□ 0.55
HMGCS1-206ENST00000511774 PCNX1Q96RV3 2341 aa18.51■□□□□ 0.55
HMGCS1-206ENST00000511774 OR6C74A6NCV1 312 aa18.51■□□□□ 0.55
HMGCS1-206ENST00000511774 SLC9B1P1A6NJY1 282 aa18.51■□□□□ 0.55
HMGCS1-206ENST00000511774 HALP42357 657 aa18.51■□□□□ 0.55
HMGCS1-206ENST00000511774 GBE1Q04446 702 aa18.51■□□□□ 0.55
HMGCS1-206ENST00000511774 DMPKQ09013 629 aa18.51■□□□□ 0.55
HMGCS1-206ENST00000511774 DPYSL3Q14195 570 aa18.51■□□□□ 0.55
HMGCS1-206ENST00000511774 MYBPC3Q14896 1274 aa18.51■□□□□ 0.55
HMGCS1-206ENST00000511774 TIGD7Q6NT04 549 aaPredicted RBP18.51■□□□□ 0.55
HMGCS1-206ENST00000511774 KLHL35Q6PF15 583 aa18.51■□□□□ 0.55
HMGCS1-206ENST00000511774 ZC3H18Q86VM9 953 aaKnown RBP18.51■□□□□ 0.55
HMGCS1-206ENST00000511774 GALNT16Q8N428 558 aa18.51■□□□□ 0.55
HMGCS1-206ENST00000511774 INSM2Q96T92 566 aaPredicted RBP18.51■□□□□ 0.55
HMGCS1-206ENST00000511774 HAUS4Q9H6D7 363 aa18.51■□□□□ 0.55
HMGCS1-206ENST00000511774 BPIFA1Q9NP55 256 aa18.51■□□□□ 0.55
HMGCS1-206ENST00000511774 IMP3Q9NV31 184 aaKnown RBP18.51■□□□□ 0.55
HMGCS1-206ENST00000511774 KCNK1O00180 336 aa18.5■□□□□ 0.55
HMGCS1-206ENST00000511774 POP7O75817 140 aaKnown RBP18.5■□□□□ 0.55
HMGCS1-206ENST00000511774 TPM2P07951 284 aa18.5■□□□□ 0.55
HMGCS1-206ENST00000511774 MTHFD1P11586 935 aaKnown RBP18.5■□□□□ 0.55
HMGCS1-206ENST00000511774 GZMAP12544 262 aa18.5■□□□□ 0.55
HMGCS1-206ENST00000511774 KRT81Q14533 505 aa18.5■□□□□ 0.55
HMGCS1-206ENST00000511774 NAA30Q147X3 362 aaPredicted RBP18.5■□□□□ 0.55
HMGCS1-206ENST00000511774 CT47A1Q5JQC4 288 aaPredicted RBP18.5■□□□□ 0.55
HMGCS1-206ENST00000511774 DCAF10Q5QP82 559 aa18.5■□□□□ 0.55
HMGCS1-206ENST00000511774 LYPLAL1Q5VWZ2 237 aa18.5■□□□□ 0.55
HMGCS1-206ENST00000511774 PPP1R2P3Q6NXS1 205 aa18.5■□□□□ 0.55
HMGCS1-206ENST00000511774 RASGEF1AQ8N9B8 481 aa18.5■□□□□ 0.55
HMGCS1-206ENST00000511774 SPDYE1Q8NFV5 336 aaPredicted RBP18.5■□□□□ 0.55
HMGCS1-206ENST00000511774 NAT14Q8WUY8 206 aa18.5■□□□□ 0.55
HMGCS1-206ENST00000511774 VPS35Q96QK1 796 aa18.5■□□□□ 0.55
HMGCS1-206ENST00000511774 ADGRE3Q9BY15 652 aa18.5■□□□□ 0.55
HMGCS1-206ENST00000511774 CEP41Q9BYV8 373 aa18.5■□□□□ 0.55
HMGCS1-206ENST00000511774 ACTR5Q9H9F9 607 aaPredicted RBP18.5■□□□□ 0.55
HMGCS1-206ENST00000511774 MAGEE1Q9HCI5 957 aa18.5■□□□□ 0.55
HMGCS1-206ENST00000511774 SCINQ9Y6U3 715 aa18.5■□□□□ 0.55
HMGCS1-206ENST00000511774 LRRC53A6NM62 1247 aa18.49■□□□□ 0.55
HMGCS1-206ENST00000511774 TMEM150CB9EJG8 249 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms