RNA–Protein interactions for RNA: ENST00000510098.1

CAST-229, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 1,323 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-229ENST00000510098 MCM10Q7L590 875 aa3.8□□□□□ -1.8
CAST-229ENST00000510098 RBM23Q86U06 439 aaKnown RBP3.8□□□□□ -1.8
CAST-229ENST00000510098 SLC9B2Q86UD5 537 aa3.8□□□□□ -1.8
CAST-229ENST00000510098 DNAAF5Q86Y56 855 aa3.8□□□□□ -1.8
CAST-229ENST00000510098 SCYL3Q8IZE3 742 aa3.8□□□□□ -1.8
CAST-229ENST00000510098 C10orf53Q8N6V4 93 aa3.8□□□□□ -1.8
CAST-229ENST00000510098 SYT2Q8N9I0 419 aaPredicted RBP3.8□□□□□ -1.8
CAST-229ENST00000510098 ZNF114Q8NC26 417 aa3.8□□□□□ -1.8
CAST-229ENST00000510098 LILRB1Q8NHL6 650 aaPredicted RBP3.8□□□□□ -1.8
CAST-229ENST00000510098 TRPC4APQ8TEL6 797 aa3.8□□□□□ -1.8
CAST-229ENST00000510098 PRPF31Q8WWY3 499 aaKnown RBP3.8□□□□□ -1.8
CAST-229ENST00000510098 N4BP2L2Q92802 583 aaPredicted RBP3.8□□□□□ -1.8
CAST-229ENST00000510098 EXOC4Q96A65 974 aa3.8□□□□□ -1.8
CAST-229ENST00000510098 CENPTQ96BT3 561 aa3.8□□□□□ -1.8
CAST-229ENST00000510098 RHBDF1Q96CC6 855 aa3.8□□□□□ -1.8
CAST-229ENST00000510098 SIPA1Q96FS4 1042 aa3.8□□□□□ -1.8
CAST-229ENST00000510098 TMEM19Q96HH6 336 aa3.8□□□□□ -1.8
CAST-229ENST00000510098 QRFPRQ96P65 431 aa3.8□□□□□ -1.8
CAST-229ENST00000510098 SMC6Q96SB8 1091 aa3.8□□□□□ -1.8
CAST-229ENST00000510098 THUMPD3Q9BV44 507 aaKnown RBP3.8□□□□□ -1.8
CAST-229ENST00000510098 SPRY4Q9C004 299 aa3.8□□□□□ -1.8
CAST-229ENST00000510098 TMEM39BQ9GZU3 492 aa3.8□□□□□ -1.8
CAST-229ENST00000510098 VPS33BQ9H267 617 aa3.8□□□□□ -1.8
CAST-229ENST00000510098 DNAJC18Q9H819 358 aa3.8□□□□□ -1.8
CAST-229ENST00000510098 DBNLQ9UJU6 430 aaKnown RBP3.8□□□□□ -1.8
CAST-229ENST00000510098 VDAC3Q9Y277 283 aa3.8□□□□□ -1.8
CAST-229ENST00000510098 A0A0U1RQK1 487 aa3.79□□□□□ -1.8
CAST-229ENST00000510098 ZNF320A2RRD8 509 aa3.79□□□□□ -1.8
CAST-229ENST00000510098 NDC80O14777 642 aa3.79□□□□□ -1.8
CAST-229ENST00000510098 ANKRD28O15084 1053 aa3.79□□□□□ -1.8
CAST-229ENST00000510098 STX6O43752 255 aa3.79□□□□□ -1.8
CAST-229ENST00000510098 MITFO75030 526 aaPredicted RBP3.79□□□□□ -1.8
CAST-229ENST00000510098 PMS2P2O95744 297 aa3.79□□□□□ -1.8
CAST-229ENST00000510098 LINC00271P0C7V0 271 aa3.79□□□□□ -1.8
CAST-229ENST00000510098 DAOP14920 347 aa3.79□□□□□ -1.8
CAST-229ENST00000510098 GNL1P36915 607 aaPredicted RBP3.79□□□□□ -1.8
CAST-229ENST00000510098 APOBEC1P41238 236 aaKnown RBP3.79□□□□□ -1.8
CAST-229ENST00000510098 KRTAP10-6P60371 365 aaPredicted RBP3.79□□□□□ -1.8
CAST-229ENST00000510098 IL1RL1Q01638 556 aa3.79□□□□□ -1.8
CAST-229ENST00000510098 YWHAHQ04917 246 aaPredicted RBP3.79□□□□□ -1.8
CAST-229ENST00000510098 ZNF155Q12901 538 aaPredicted RBP3.79□□□□□ -1.8
CAST-229ENST00000510098 DLG1Q12959 904 aa3.79□□□□□ -1.8
CAST-229ENST00000510098 SNTA1Q13424 505 aa3.79□□□□□ -1.8
CAST-229ENST00000510098 MORF4L2Q15014 288 aa3.79□□□□□ -1.8
CAST-229ENST00000510098 TNIP1Q15025 636 aa3.79□□□□□ -1.8
CAST-229ENST00000510098 PPA1Q15181 289 aa3.79□□□□□ -1.8
CAST-229ENST00000510098 TAF7Q15545 349 aaPredicted RBP3.79□□□□□ -1.8
CAST-229ENST00000510098 NSUN5P2Q63ZY6 315 aa3.79□□□□□ -1.8
CAST-229ENST00000510098 C18orf63Q68DL7 685 aa3.79□□□□□ -1.8
CAST-229ENST00000510098 PAPD4Q6PIY7 484 aaKnown RBP3.79□□□□□ -1.8
CAST-229ENST00000510098 BRAT1Q6PJG6 821 aa3.79□□□□□ -1.8
CAST-229ENST00000510098 UNC5DQ6UXZ4 953 aa3.79□□□□□ -1.8
CAST-229ENST00000510098 NUP54Q7Z3B4 507 aa3.79□□□□□ -1.8
CAST-229ENST00000510098 PIWIL3Q7Z3Z3 882 aaKnown RBP3.79□□□□□ -1.8
CAST-229ENST00000510098 GLRX5Q86SX6 157 aa3.79□□□□□ -1.8
CAST-229ENST00000510098 NRROSQ86YC3 692 aa3.79□□□□□ -1.8
CAST-229ENST00000510098 ZNF34Q8IZ26 560 aa3.79□□□□□ -1.8
CAST-229ENST00000510098 OR6J1Q8NGC5 347 aa3.79□□□□□ -1.8
CAST-229ENST00000510098 UTP15Q8TED0 518 aaKnown RBP3.79□□□□□ -1.8
CAST-229ENST00000510098 DUSP19Q8WTR2 217 aa3.79□□□□□ -1.8
CAST-229ENST00000510098 PTP4A1Q93096 173 aa3.79□□□□□ -1.8
CAST-229ENST00000510098 SLC22A18Q96BI1 424 aa3.79□□□□□ -1.8
CAST-229ENST00000510098 ZNF385AQ96PM9 386 aaKnown RBP3.79□□□□□ -1.8
CAST-229ENST00000510098 TSGA13Q96PP4 275 aa3.79□□□□□ -1.8
CAST-229ENST00000510098 GCNAQ96QF7 691 aa3.79□□□□□ -1.8
CAST-229ENST00000510098 SEMA3CQ99985 751 aa3.79□□□□□ -1.8
CAST-229ENST00000510098 KLHL4Q9C0H6 718 aa3.79□□□□□ -1.8
CAST-229ENST00000510098 IL25Q9H293 177 aa3.79□□□□□ -1.8
CAST-229ENST00000510098 OPA3Q9H6K4 179 aa3.79□□□□□ -1.8
CAST-229ENST00000510098 ARHGEF38Q9NXL2 777 aa3.79□□□□□ -1.8
CAST-229ENST00000510098 SEC63Q9UGP8 760 aaKnown RBP3.79□□□□□ -1.8
CAST-229ENST00000510098 TBK1Q9UHD2 729 aa3.79□□□□□ -1.8
CAST-229ENST00000510098 KCNS2Q9ULS6 477 aa3.79□□□□□ -1.8
CAST-229ENST00000510098 RABL2BQ9UNT1 228 aa3.79□□□□□ -1.8
CAST-229ENST00000510098 EXO1Q9UQ84 846 aaKnown RBP3.79□□□□□ -1.8
CAST-229ENST00000510098 PCDHGB1Q9Y5G3 927 aa3.79□□□□□ -1.8
CAST-229ENST00000510098 IKBKGQ9Y6K9 419 aa3.79□□□□□ -1.8
CAST-229ENST00000510098 TAF1P21675 1872 aa3.78□□□□□ -1.8
CAST-229ENST00000510098 A0A0G2JPF8 293 aa3.78□□□□□ -1.8
CAST-229ENST00000510098 hCG_1809904A0A1W2PP81 198 aa3.78□□□□□ -1.8
CAST-229ENST00000510098 A0A1W2PPE2 198 aa3.78□□□□□ -1.8
CAST-229ENST00000510098 A0A1W2PR64 198 aa3.78□□□□□ -1.8
CAST-229ENST00000510098 HNRNPCL3B7ZW38 293 aa3.78□□□□□ -1.8
CAST-229ENST00000510098 H0YAE9 185 aa3.78□□□□□ -1.8
CAST-229ENST00000510098 PLOD2O00469 737 aa3.78□□□□□ -1.8
CAST-229ENST00000510098 MPHOSPH10O00566 681 aaKnown RBP3.78□□□□□ -1.8
CAST-229ENST00000510098 MID1O15344 667 aa3.78□□□□□ -1.8
CAST-229ENST00000510098 KCNN4O15554 427 aa3.78□□□□□ -1.8
CAST-229ENST00000510098 ZBTB14O43829 449 aa3.78□□□□□ -1.8
CAST-229ENST00000510098 KERAO60938 352 aa3.78□□□□□ -1.8
CAST-229ENST00000510098 ZBTB11O95625 1053 aaPredicted RBP3.78□□□□□ -1.8
CAST-229ENST00000510098 TUBBP07437 444 aa3.78□□□□□ -1.8
CAST-229ENST00000510098 SNRNP70P08621 437 aaKnown RBP3.78□□□□□ -1.8
CAST-229ENST00000510098 HNRNPCL4P0DMR1 293 aa3.78□□□□□ -1.8
CAST-229ENST00000510098 MMP9P14780 707 aa3.78□□□□□ -1.8
CAST-229ENST00000510098 S1PR1P21453 382 aa3.78□□□□□ -1.8
CAST-229ENST00000510098 CORO1AP31146 461 aaKnown RBP3.78□□□□□ -1.8
CAST-229ENST00000510098 PEX19P40855 299 aa3.78□□□□□ -1.8
CAST-229ENST00000510098 LIG4P49917 911 aa3.78□□□□□ -1.8
CAST-229ENST00000510098 GAS1P54826 345 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms