RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 STK10O94804 968 aaKnown RBP15.06■□□□□ 0
TPM3-219ENST00000509409 LCA5LO95447 670 aa15.06■□□□□ 0
TPM3-219ENST00000509409 PRAMEF1O95521 474 aa15.06■□□□□ 0
TPM3-219ENST00000509409 NELFEP18615 380 aaKnown RBP15.06■□□□□ 0
TPM3-219ENST00000509409 F8A1P23610 371 aa15.06■□□□□ 0
TPM3-219ENST00000509409 CETN2P41208 172 aa15.06■□□□□ 0
TPM3-219ENST00000509409 COPS2P61201 443 aa15.06■□□□□ 0
TPM3-219ENST00000509409 DMPKQ09013 629 aa15.06■□□□□ 0
TPM3-219ENST00000509409 ERV3-1Q14264 604 aa15.06■□□□□ 0
TPM3-219ENST00000509409 KRT33BQ14525 404 aa15.06■□□□□ 0
TPM3-219ENST00000509409 GSE1Q14687 1217 aa15.06■□□□□ 0
TPM3-219ENST00000509409 TAF1AQ15573 450 aaPredicted RBP15.06■□□□□ 0
TPM3-219ENST00000509409 ARMC6Q6NXE6 501 aa15.06■□□□□ 0
TPM3-219ENST00000509409 DARS2Q6PI48 645 aaKnown RBP15.06■□□□□ 0
TPM3-219ENST00000509409 CDKL3Q8IVW4 592 aaPredicted RBP15.06■□□□□ 0
TPM3-219ENST00000509409 OR4K2Q8NGD2 314 aa15.06■□□□□ 0
TPM3-219ENST00000509409 GPR150Q8NGU9 434 aa15.06■□□□□ 0
TPM3-219ENST00000509409 C9orf43Q8TAL5 461 aaPredicted RBP15.06■□□□□ 0
TPM3-219ENST00000509409 UBXN4Q92575 508 aa15.06■□□□□ 0
TPM3-219ENST00000509409 DCUN1D1Q96GG9 259 aa15.06■□□□□ 0
TPM3-219ENST00000509409 RAB33BQ9H082 229 aa15.06■□□□□ 0
TPM3-219ENST00000509409 WWP1Q9H0M0 922 aa15.06■□□□□ 0
TPM3-219ENST00000509409 RARRES3Q9UL19 164 aa15.06■□□□□ 0
TPM3-219ENST00000509409 PADI1Q9ULC6 663 aa15.06■□□□□ 0
TPM3-219ENST00000509409 AAR2Q9Y312 384 aaKnown RBP15.06■□□□□ 0
TPM3-219ENST00000509409 IGHV5-51A0A0C4DH38 117 aa15.05■□□□□ -0
TPM3-219ENST00000509409 C5orf60A6NFR6 353 aa15.05■□□□□ -0
TPM3-219ENST00000509409 MGAT4DA6NG13 374 aa15.05■□□□□ -0
TPM3-219ENST00000509409 GAPDHSO14556 408 aaPredicted RBP15.05■□□□□ -0
TPM3-219ENST00000509409 KCNN4O15554 427 aa15.05■□□□□ -0
TPM3-219ENST00000509409 ARHGAP6O43182 974 aa15.05■□□□□ -0
TPM3-219ENST00000509409 MT-ND3P03897 115 aa15.05■□□□□ -0
TPM3-219ENST00000509409 FGF5P12034 268 aa15.05■□□□□ -0
TPM3-219ENST00000509409 EIF3EP60228 445 aaKnown RBP15.05■□□□□ -0
TPM3-219ENST00000509409 PPP1CAP62136 330 aa15.05■□□□□ -0
TPM3-219ENST00000509409 TMPRSS15P98073 1019 aa15.05■□□□□ -0
TPM3-219ENST00000509409 OTUD4Q01804 1114 aaKnown RBP15.05■□□□□ -0
TPM3-219ENST00000509409 TLE1Q04724 770 aa15.05■□□□□ -0
TPM3-219ENST00000509409 SKIDA1Q1XH10 827 aa15.05■□□□□ -0
TPM3-219ENST00000509409 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.05■□□□□ -0
TPM3-219ENST00000509409 DNTTIP2Q5QJE6 756 aaKnown RBP15.05■□□□□ -0
TPM3-219ENST00000509409 ANKRD20A2Q5SQ80 823 aa15.05■□□□□ -0
TPM3-219ENST00000509409 ANKRD20A1Q5TYW2 823 aa15.05■□□□□ -0
TPM3-219ENST00000509409 ANKRD20A3Q5VUR7 823 aa15.05■□□□□ -0
TPM3-219ENST00000509409 METRNLQ641Q3 311 aa15.05■□□□□ -0
TPM3-219ENST00000509409 SARM1Q6SZW1 724 aa15.05■□□□□ -0
TPM3-219ENST00000509409 ACTL9Q8TC94 416 aa15.05■□□□□ -0
TPM3-219ENST00000509409 NAT14Q8WUY8 206 aa15.05■□□□□ -0
TPM3-219ENST00000509409 ABHD17AQ96GS6 310 aa15.05■□□□□ -0
TPM3-219ENST00000509409 C12orf66Q96MD2 445 aa15.05■□□□□ -0
TPM3-219ENST00000509409 INSM2Q96T92 566 aaPredicted RBP15.05■□□□□ -0
TPM3-219ENST00000509409 OSBPL8Q9BZF1 889 aa15.05■□□□□ -0
TPM3-219ENST00000509409 HRASLS2Q9NWW9 162 aa15.05■□□□□ -0
TPM3-219ENST00000509409 FKBPLQ9UIM3 349 aa15.05■□□□□ -0
TPM3-219ENST00000509409 CRLS1Q9UJA2 301 aa15.05■□□□□ -0
TPM3-219ENST00000509409 KCND3Q9UK17 655 aa15.05■□□□□ -0
TPM3-219ENST00000509409 ACSL5Q9ULC5 683 aa15.05■□□□□ -0
TPM3-219ENST00000509409 KCTD3Q9Y597 815 aa15.05■□□□□ -0
TPM3-219ENST00000509409 PCDHA3Q9Y5H8 950 aa15.05■□□□□ -0
TPM3-219ENST00000509409 SPTA1P02549 2419 aa15.05■□□□□ -0
TPM3-219ENST00000509409 SETXQ7Z333 2677 aaKnown RBP15.04■□□□□ -0
TPM3-219ENST00000509409 BSNQ9UPA5 3926 aa15.04■□□□□ -0
TPM3-219ENST00000509409 PIPSLA2A3N6 862 aa15.04■□□□□ -0
TPM3-219ENST00000509409 SRP72O76094 671 aaKnown RBP15.04■□□□□ -0
TPM3-219ENST00000509409 IPO7O95373 1038 aaKnown RBP15.04■□□□□ -0
TPM3-219ENST00000509409 CRTAMO95727 393 aa15.04■□□□□ -0
TPM3-219ENST00000509409 PTMAP06454 111 aaKnown RBP15.04■□□□□ -0
TPM3-219ENST00000509409 POLBP06746 335 aa15.04■□□□□ -0
TPM3-219ENST00000509409 RBP3P10745 1247 aa15.04■□□□□ -0
TPM3-219ENST00000509409 RALBP11234 206 aa15.04■□□□□ -0
TPM3-219ENST00000509409 MTHFD1P11586 935 aaKnown RBP15.04■□□□□ -0
TPM3-219ENST00000509409 FOLR1P15328 257 aa15.04■□□□□ -0
TPM3-219ENST00000509409 PSMB4P28070 264 aa15.04■□□□□ -0
TPM3-219ENST00000509409 RWDD2BP57060 319 aa15.04■□□□□ -0
TPM3-219ENST00000509409 PDE1BQ01064 536 aa15.04■□□□□ -0
TPM3-219ENST00000509409 ACY1Q03154 408 aa15.04■□□□□ -0
TPM3-219ENST00000509409 TUBB3Q13509 450 aa15.04■□□□□ -0
TPM3-219ENST00000509409 OLIG2Q13516 323 aa15.04■□□□□ -0
TPM3-219ENST00000509409 KCNAB1Q14722 419 aa15.04■□□□□ -0
TPM3-219ENST00000509409 CRTC2Q53ET0 693 aaPredicted RBP15.04■□□□□ -0
TPM3-219ENST00000509409 RANBP10Q6VN20 620 aa15.04■□□□□ -0
TPM3-219ENST00000509409 CFAP206Q8IYR0 622 aa15.04■□□□□ -0
TPM3-219ENST00000509409 OR2L2Q8NH16 312 aa15.04■□□□□ -0
TPM3-219ENST00000509409 LRRC45Q96CN5 670 aa15.04■□□□□ -0
TPM3-219ENST00000509409 CALR3Q96L12 384 aaKnown RBP15.04■□□□□ -0
TPM3-219ENST00000509409 MAP3K3Q99759 626 aa15.04■□□□□ -0
TPM3-219ENST00000509409 FAM118BQ9BPY3 351 aa15.04■□□□□ -0
TPM3-219ENST00000509409 FAM96AQ9H5X1 160 aa15.04■□□□□ -0
TPM3-219ENST00000509409 SMOXQ9NWM0 555 aa15.04■□□□□ -0
TPM3-219ENST00000509409 EPN1Q9Y6I3 576 aaPredicted RBP15.04■□□□□ -0
TPM3-219ENST00000509409 COLEC10Q9Y6Z7 277 aa15.04■□□□□ -0
TPM3-219ENST00000509409 CDC14CA4D256 554 aa15.03■□□□□ -0
TPM3-219ENST00000509409 OR6C74A6NCV1 312 aa15.03■□□□□ -0
TPM3-219ENST00000509409 OR5K3A6NET4 321 aa15.03■□□□□ -0
TPM3-219ENST00000509409 SLC35G4P0C7Q5 338 aa15.03■□□□□ -0
TPM3-219ENST00000509409 EBLN1P0CF75 366 aa15.03■□□□□ -0
TPM3-219ENST00000509409 PYGMP11217 842 aa15.03■□□□□ -0
TPM3-219ENST00000509409 CTNNA1P35221 906 aaKnown RBP15.03■□□□□ -0
TPM3-219ENST00000509409 DUS1LQ6P1R4 473 aaKnown RBP15.03■□□□□ -0
TPM3-219ENST00000509409 OOSP2Q86WS3 158 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms