RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 SNAP47Q5SQN1 464 aa8.6□□□□□ -1.03
PDLIM5-213ENST00000509357 GPRC6AQ5T6X5 926 aa8.6□□□□□ -1.03
PDLIM5-213ENST00000509357 TMEM164Q5U3C3 297 aa8.6□□□□□ -1.03
PDLIM5-213ENST00000509357 IYDQ6PHW0 289 aa8.6□□□□□ -1.03
PDLIM5-213ENST00000509357 C4orf22Q6V702 233 aa8.6□□□□□ -1.03
PDLIM5-213ENST00000509357 PPP1R21Q6ZMI0 780 aa8.6□□□□□ -1.03
PDLIM5-213ENST00000509357 LRRTM4Q86VH4 590 aa8.6□□□□□ -1.03
PDLIM5-213ENST00000509357 C17orf82Q86X59 251 aaPredicted RBP8.6□□□□□ -1.03
PDLIM5-213ENST00000509357 PPIL6Q8IXY8 311 aa8.6□□□□□ -1.03
PDLIM5-213ENST00000509357 SFRP1Q8N474 314 aa8.6□□□□□ -1.03
PDLIM5-213ENST00000509357 RASGEF1AQ8N9B8 481 aa8.6□□□□□ -1.03
PDLIM5-213ENST00000509357 DNAAF3Q8N9W5 541 aa8.6□□□□□ -1.03
PDLIM5-213ENST00000509357 KIF18AQ8NI77 898 aa8.6□□□□□ -1.03
PDLIM5-213ENST00000509357 SLC37A2Q8TED4 501 aa8.6□□□□□ -1.03
PDLIM5-213ENST00000509357 GRK7Q8WTQ7 553 aa8.6□□□□□ -1.03
PDLIM5-213ENST00000509357 HDAC10Q969S8 669 aa8.6□□□□□ -1.03
PDLIM5-213ENST00000509357 TMEM159Q96B96 161 aa8.6□□□□□ -1.03
PDLIM5-213ENST00000509357 CRELD1Q96HD1 420 aa8.6□□□□□ -1.03
PDLIM5-213ENST00000509357 PRR11Q96HE9 360 aaPredicted RBP8.6□□□□□ -1.03
PDLIM5-213ENST00000509357 VPS35Q96QK1 796 aa8.6□□□□□ -1.03
PDLIM5-213ENST00000509357 KIFC1Q9BW19 673 aa8.6□□□□□ -1.03
PDLIM5-213ENST00000509357 SEMA6CQ9H3T2 930 aa8.6□□□□□ -1.03
PDLIM5-213ENST00000509357 ASCL3Q9NQ33 180 aa8.6□□□□□ -1.03
PDLIM5-213ENST00000509357 PRDM8Q9NQV8 689 aa8.6□□□□□ -1.03
PDLIM5-213ENST00000509357 TBC1D29Q9UFV1 150 aa8.6□□□□□ -1.03
PDLIM5-213ENST00000509357 SOX13Q9UN79 622 aa8.6□□□□□ -1.03
PDLIM5-213ENST00000509357 FAM208BQ5VWN6 2430 aa8.6□□□□□ -1.03
PDLIM5-213ENST00000509357 IGLV3-16A0A075B6K0 115 aa8.59□□□□□ -1.03
PDLIM5-213ENST00000509357 KIR2DS5A0A0G2JLQ3 304 aa8.59□□□□□ -1.03
PDLIM5-213ENST00000509357 A0A0G2JNG1 304 aa8.59□□□□□ -1.03
PDLIM5-213ENST00000509357 A0A1W2PNU3 283 aaPredicted RBP8.59□□□□□ -1.03
PDLIM5-213ENST00000509357 FAM187AA6NFU0 413 aa8.59□□□□□ -1.03
PDLIM5-213ENST00000509357 OR5K4A6NMS3 321 aa8.59□□□□□ -1.03
PDLIM5-213ENST00000509357 E7ESA3 106 aa8.59□□□□□ -1.03
PDLIM5-213ENST00000509357 KIR2DS3K7RE56 304 aa8.59□□□□□ -1.03
PDLIM5-213ENST00000509357 KIF2AO00139 706 aaPredicted RBP8.59□□□□□ -1.03
PDLIM5-213ENST00000509357 DUX1O43812 170 aa8.59□□□□□ -1.03
PDLIM5-213ENST00000509357 OR1I1O60431 355 aa8.59□□□□□ -1.03
PDLIM5-213ENST00000509357 PPFIA2O75334 1257 aa8.59□□□□□ -1.03
PDLIM5-213ENST00000509357 CRTAMO95727 393 aa8.59□□□□□ -1.03
PDLIM5-213ENST00000509357 GOT2P00505 430 aaKnown RBP8.59□□□□□ -1.03
PDLIM5-213ENST00000509357 VIPP01282 170 aa8.59□□□□□ -1.03
PDLIM5-213ENST00000509357 F3P13726 295 aa8.59□□□□□ -1.03
PDLIM5-213ENST00000509357 ZNF7P17097 686 aaPredicted RBP8.59□□□□□ -1.03
PDLIM5-213ENST00000509357 MSH3P20585 1137 aa8.59□□□□□ -1.03
PDLIM5-213ENST00000509357 IDSP22304 550 aa8.59□□□□□ -1.03
PDLIM5-213ENST00000509357 ADRA1DP25100 572 aa8.59□□□□□ -1.03
PDLIM5-213ENST00000509357 SLC5A2P31639 672 aa8.59□□□□□ -1.03
PDLIM5-213ENST00000509357 CSTF2P33240 577 aaKnown RBP eCLIP8.59□□□□□ -1.03
PDLIM5-213ENST00000509357 MLLT3P42568 568 aaPredicted RBP8.59□□□□□ -1.03
PDLIM5-213ENST00000509357 LMAN1P49257 510 aa8.59□□□□□ -1.03
PDLIM5-213ENST00000509357 UCNP55089 124 aa8.59□□□□□ -1.03
PDLIM5-213ENST00000509357 TMPRSS3P57727 454 aa8.59□□□□□ -1.03
PDLIM5-213ENST00000509357 GPLD1P80108 840 aa8.59□□□□□ -1.03
PDLIM5-213ENST00000509357 CDK16Q00536 496 aa8.59□□□□□ -1.03
PDLIM5-213ENST00000509357 TLE3Q04726 772 aa8.59□□□□□ -1.03
PDLIM5-213ENST00000509357 ZFP36L1Q07352 338 aaKnown RBP8.59□□□□□ -1.03
PDLIM5-213ENST00000509357 TMEM115Q12893 351 aaPredicted RBP8.59□□□□□ -1.03
PDLIM5-213ENST00000509357 CBLBQ13191 982 aa8.59□□□□□ -1.03
PDLIM5-213ENST00000509357 ITGA9Q13797 1035 aa8.59□□□□□ -1.03
PDLIM5-213ENST00000509357 KIR2DS5Q14953 304 aa8.59□□□□□ -1.03
PDLIM5-213ENST00000509357 DBN1Q16643 649 aa8.59□□□□□ -1.03
PDLIM5-213ENST00000509357 CLPPQ16740 277 aaPredicted RBP8.59□□□□□ -1.03
PDLIM5-213ENST00000509357 LDLRAP1Q5SW96 308 aa8.59□□□□□ -1.03
PDLIM5-213ENST00000509357 TRMT10BQ6PF06 316 aaKnown RBP8.59□□□□□ -1.03
PDLIM5-213ENST00000509357 IGF2-ASQ6U949 168 aa8.59□□□□□ -1.03
PDLIM5-213ENST00000509357 FAM83HQ6ZRV2 1179 aaPredicted RBP8.59□□□□□ -1.03
PDLIM5-213ENST00000509357 SYDE1Q6ZW31 735 aaPredicted RBP8.59□□□□□ -1.03
PDLIM5-213ENST00000509357 ZNF438Q7Z4V0 828 aa8.59□□□□□ -1.03
PDLIM5-213ENST00000509357 LINC00523Q86TU6 105 aa8.59□□□□□ -1.03
PDLIM5-213ENST00000509357 TMEM135Q86UB9 458 aa8.59□□□□□ -1.03
PDLIM5-213ENST00000509357 HOOK3Q86VS8 718 aa8.59□□□□□ -1.03
PDLIM5-213ENST00000509357 SLITRK4Q8IW52 837 aa8.59□□□□□ -1.03
PDLIM5-213ENST00000509357 LILRA3Q8N6C8 439 aaPredicted RBP8.59□□□□□ -1.03
PDLIM5-213ENST00000509357 BEND7Q8N7W2 519 aaPredicted RBP8.59□□□□□ -1.03
PDLIM5-213ENST00000509357 AVL9Q8NBF6 648 aa8.59□□□□□ -1.03
PDLIM5-213ENST00000509357 RCBTB1Q8NDN9 531 aa8.59□□□□□ -1.03
PDLIM5-213ENST00000509357 DDHD1Q8NEL9 900 aa8.59□□□□□ -1.03
PDLIM5-213ENST00000509357 FBXO25Q8TCJ0 367 aa8.59□□□□□ -1.03
PDLIM5-213ENST00000509357 ZNF398Q8TD17 642 aa8.59□□□□□ -1.03
PDLIM5-213ENST00000509357 LKAAEAR1Q8TD35 194 aa8.59□□□□□ -1.03
PDLIM5-213ENST00000509357 DTX3LQ8TDB6 740 aa8.59□□□□□ -1.03
PDLIM5-213ENST00000509357 STYXQ8WUJ0 223 aa8.59□□□□□ -1.03
PDLIM5-213ENST00000509357 NCSTNQ92542 709 aa8.59□□□□□ -1.03
PDLIM5-213ENST00000509357 ART4Q93070 314 aa8.59□□□□□ -1.03
PDLIM5-213ENST00000509357 SNF8Q96H20 258 aa8.59□□□□□ -1.03
PDLIM5-213ENST00000509357 CCDC74BQ96LY2 380 aa8.59□□□□□ -1.03
PDLIM5-213ENST00000509357 DPYSL5Q9BPU6 564 aa8.59□□□□□ -1.03
PDLIM5-213ENST00000509357 NUDT22Q9BRQ3 303 aa8.59□□□□□ -1.03
PDLIM5-213ENST00000509357 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.59□□□□□ -1.03
PDLIM5-213ENST00000509357 DPH1Q9BZG8 443 aa8.59□□□□□ -1.03
PDLIM5-213ENST00000509357 SARS2Q9NP81 518 aaKnown RBP8.59□□□□□ -1.03
PDLIM5-213ENST00000509357 SMYD2Q9NRG4 433 aa8.59□□□□□ -1.03
PDLIM5-213ENST00000509357 SMOXQ9NWM0 555 aa8.59□□□□□ -1.03
PDLIM5-213ENST00000509357 CPNE7Q9UBL6 633 aa8.59□□□□□ -1.03
PDLIM5-213ENST00000509357 FEZ2Q9UHY8 353 aaPredicted RBP8.59□□□□□ -1.03
PDLIM5-213ENST00000509357 TEX264Q9Y6I9 313 aa8.59□□□□□ -1.03
PDLIM5-213ENST00000509357 ZFYVE26Q68DK2 2539 aa8.59□□□□□ -1.03
PDLIM5-213ENST00000509357 RP1P56715 2156 aa8.59□□□□□ -1.03
PDLIM5-213ENST00000509357 IGHV1OR21-1A0A087WYE8 117 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms