RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 OR4F6Q8NGB9 312 aa14.29□□□□□ -0.12
DDX41-208ENST00000507955 METTL6Q8TCB7 284 aa14.29□□□□□ -0.12
DDX41-208ENST00000507955 EZH1Q92800 747 aaPredicted RBP14.29□□□□□ -0.12
DDX41-208ENST00000507955 GPATCH1Q9BRR8 931 aaKnown RBP14.29□□□□□ -0.12
DDX41-208ENST00000507955 HERC2P3Q9BVR0 1158 aa14.29□□□□□ -0.12
DDX41-208ENST00000507955 RETREG1Q9H6L5 497 aa14.29□□□□□ -0.12
DDX41-208ENST00000507955 FARSBQ9NSD9 589 aaKnown RBP14.29□□□□□ -0.12
DDX41-208ENST00000507955 CD84Q9UIB8 345 aa14.29□□□□□ -0.12
DDX41-208ENST00000507955 SLCO3A1Q9UIG8 710 aa14.29□□□□□ -0.12
DDX41-208ENST00000507955 EYSQ5T1H1 3165 aa14.29□□□□□ -0.12
DDX41-208ENST00000507955 H3BSA7 217 aa14.28□□□□□ -0.12
DDX41-208ENST00000507955 STX16O14662 325 aa14.28□□□□□ -0.12
DDX41-208ENST00000507955 UROSP10746 265 aa14.28□□□□□ -0.12
DDX41-208ENST00000507955 GGT5P36269 586 aa14.28□□□□□ -0.12
DDX41-208ENST00000507955 ABRAXAS2Q15018 415 aa14.28□□□□□ -0.12
DDX41-208ENST00000507955 CDKN3Q16667 212 aa14.28□□□□□ -0.12
DDX41-208ENST00000507955 MAP7D1Q3KQU3 841 aa14.28□□□□□ -0.12
DDX41-208ENST00000507955 PLEKHG6Q3KR16 790 aa14.28□□□□□ -0.12
DDX41-208ENST00000507955 SAMD4BQ5PRF9 694 aaKnown RBP14.28□□□□□ -0.12
DDX41-208ENST00000507955 C6orf136Q5SQH8 315 aa14.28□□□□□ -0.12
DDX41-208ENST00000507955 ASTLQ6HA08 431 aaPredicted RBP14.28□□□□□ -0.12
DDX41-208ENST00000507955 RETSATQ6NUM9 610 aa14.28□□□□□ -0.12
DDX41-208ENST00000507955 GOLGA7Q7Z5G4 137 aa14.28□□□□□ -0.12
DDX41-208ENST00000507955 SFRP1Q8N474 314 aa14.28□□□□□ -0.12
DDX41-208ENST00000507955 PCYOX1LQ8NBM8 494 aa14.28□□□□□ -0.12
DDX41-208ENST00000507955 OR56A4Q8NGH8 313 aa14.28□□□□□ -0.12
DDX41-208ENST00000507955 B4GALNT2Q8NHY0 566 aa14.28□□□□□ -0.12
DDX41-208ENST00000507955 MRPS31Q92665 395 aaKnown RBP14.28□□□□□ -0.12
DDX41-208ENST00000507955 LRRC58Q96CX6 371 aa14.28□□□□□ -0.12
DDX41-208ENST00000507955 TCEAL4Q96EI5 215 aa14.28□□□□□ -0.12
DDX41-208ENST00000507955 HIC2Q96JB3 615 aa14.28□□□□□ -0.12
DDX41-208ENST00000507955 ZNF597Q96LX8 424 aa14.28□□□□□ -0.12
DDX41-208ENST00000507955 INTS7Q9NVH2 962 aaKnown RBP14.28□□□□□ -0.12
DDX41-208ENST00000507955 VPS9D1Q9Y2B5 631 aa14.28□□□□□ -0.12
DDX41-208ENST00000507955 V9GYQ6 96 aa14.28□□□□□ -0.12
DDX41-208ENST00000507955 GIPC1O14908 333 aa14.28□□□□□ -0.12
DDX41-208ENST00000507955 PFDN6O15212 129 aa14.28□□□□□ -0.12
DDX41-208ENST00000507955 TAPBPO15533 448 aa14.28□□□□□ -0.12
DDX41-208ENST00000507955 FFAR2O15552 330 aa14.28□□□□□ -0.12
DDX41-208ENST00000507955 SYNCRIPO60506 623 aaKnown RBP14.28□□□□□ -0.12
DDX41-208ENST00000507955 FGF18O76093 207 aa14.28□□□□□ -0.12
DDX41-208ENST00000507955 MT-ND1P03886 318 aa14.28□□□□□ -0.12
DDX41-208ENST00000507955 OXTRP30559 389 aa14.28□□□□□ -0.12
DDX41-208ENST00000507955 SLC5A2P31639 672 aa14.28□□□□□ -0.12
DDX41-208ENST00000507955 ATP4BP51164 291 aa14.28□□□□□ -0.12
DDX41-208ENST00000507955 SGO1Q5FBB7 561 aa14.28□□□□□ -0.12
DDX41-208ENST00000507955 AARS2Q5JTZ9 985 aaKnown RBP14.28□□□□□ -0.12
DDX41-208ENST00000507955 B3GNT6Q6ZMB0 384 aa14.28□□□□□ -0.12
DDX41-208ENST00000507955 DET1Q7L5Y6 550 aa14.28□□□□□ -0.12
DDX41-208ENST00000507955 TMC8Q8IU68 726 aa14.28□□□□□ -0.12
DDX41-208ENST00000507955 MYO1HQ8N1T3 1032 aa14.28□□□□□ -0.12
DDX41-208ENST00000507955 HACD3Q9P035 362 aa14.28□□□□□ -0.12
DDX41-208ENST00000507955 OBSL1O75147 1896 aa14.28□□□□□ -0.12
DDX41-208ENST00000507955 GLYATL1P3A0A0U1RQE8 302 aa14.28□□□□□ -0.12
DDX41-208ENST00000507955 TCRBV3S1A0A5B6 114 aa14.28□□□□□ -0.12
DDX41-208ENST00000507955 RFPL2O75678 378 aa14.28□□□□□ -0.12
DDX41-208ENST00000507955 RSL1D1O76021 490 aaKnown RBP14.28□□□□□ -0.12
DDX41-208ENST00000507955 IDO1P14902 403 aa14.28□□□□□ -0.12
DDX41-208ENST00000507955 RPL10P27635 214 aaKnown RBP14.28□□□□□ -0.12
DDX41-208ENST00000507955 XKR7Q5GH72 579 aa14.28□□□□□ -0.12
DDX41-208ENST00000507955 SLC2A7Q6PXP3 512 aa14.28□□□□□ -0.12
DDX41-208ENST00000507955 ZNF783Q6ZMS7 281 aa14.28□□□□□ -0.12
DDX41-208ENST00000507955 TMEM25Q86YD3 366 aa14.28□□□□□ -0.12
DDX41-208ENST00000507955 TMIGD2Q96BF3 282 aa14.28□□□□□ -0.12
DDX41-208ENST00000507955 MTFMTQ96DP5 389 aaKnown RBP14.28□□□□□ -0.12
DDX41-208ENST00000507955 EGFL8Q99944 293 aa14.28□□□□□ -0.12
DDX41-208ENST00000507955 IPPKQ9H8X2 491 aa14.28□□□□□ -0.12
DDX41-208ENST00000507955 CRLS1Q9UJA2 301 aa14.28□□□□□ -0.12
DDX41-208ENST00000507955 CNOT11Q9UKZ1 510 aaKnown RBP14.28□□□□□ -0.12
DDX41-208ENST00000507955 CNOT6Q9ULM6 557 aaKnown RBP14.28□□□□□ -0.12
DDX41-208ENST00000507955 HCFC2Q9Y5Z7 792 aa14.28□□□□□ -0.12
DDX41-208ENST00000507955 TRIM43BA6NCK2 446 aa14.27□□□□□ -0.13
DDX41-208ENST00000507955 LEFTY2O00292 366 aa14.27□□□□□ -0.13
DDX41-208ENST00000507955 MTX2O75431 263 aa14.27□□□□□ -0.13
DDX41-208ENST00000507955 MLYCDO95822 493 aa14.27□□□□□ -0.13
DDX41-208ENST00000507955 C8AP07357 584 aa14.27□□□□□ -0.13
DDX41-208ENST00000507955 PRR35P0CG20 571 aa14.27□□□□□ -0.13
DDX41-208ENST00000507955 SRCP12931 536 aa14.27□□□□□ -0.13
DDX41-208ENST00000507955 PPP3CCP48454 512 aa14.27□□□□□ -0.13
DDX41-208ENST00000507955 HSPA13P48723 471 aa14.27□□□□□ -0.13
DDX41-208ENST00000507955 DGKQP52824 942 aa14.27□□□□□ -0.13
DDX41-208ENST00000507955 AP1S1P61966 158 aa14.27□□□□□ -0.13
DDX41-208ENST00000507955 GTF2H2Q13888 395 aa14.27□□□□□ -0.13
DDX41-208ENST00000507955 NFYCQ13952 458 aa14.27□□□□□ -0.13
DDX41-208ENST00000507955 RFTN2Q52LD8 501 aaPredicted RBP14.27□□□□□ -0.13
DDX41-208ENST00000507955 GTF2H2CQ6P1K8 395 aa14.27□□□□□ -0.13
DDX41-208ENST00000507955 KIAA2013Q8IYS2 634 aa14.27□□□□□ -0.13
DDX41-208ENST00000507955 ST13P5Q8NFI4 369 aaPredicted RBP14.27□□□□□ -0.13
DDX41-208ENST00000507955 PROKR1Q8TCW9 393 aa14.27□□□□□ -0.13
DDX41-208ENST00000507955 TRIM43Q96BQ3 446 aaPredicted RBP14.27□□□□□ -0.13
DDX41-208ENST00000507955 C1QTNF3Q9BXJ4 246 aa14.27□□□□□ -0.13
DDX41-208ENST00000507955 LRRC3Q9BY71 257 aa14.27□□□□□ -0.13
DDX41-208ENST00000507955 AIG1Q9NVV5 245 aa14.27□□□□□ -0.13
DDX41-208ENST00000507955 FAM8A1Q9UBU6 413 aa14.27□□□□□ -0.13
DDX41-208ENST00000507955 LSM7Q9UK45 103 aaKnown RBP14.27□□□□□ -0.13
DDX41-208ENST00000507955 CEPT1Q9Y6K0 416 aa14.27□□□□□ -0.13
DDX41-208ENST00000507955 AKAP10O43572 662 aa14.27□□□□□ -0.13
DDX41-208ENST00000507955 LILRB3O75022 631 aa14.27□□□□□ -0.13
DDX41-208ENST00000507955 LRG1P02750 347 aa14.27□□□□□ -0.13
DDX41-208ENST00000507955 G6PDP11413 515 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms