RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 LOC100509620A0A075B734 347 aa3.84□□□□□ -1.79
TOPBP1-204ENST00000505804 LOC102723996A0A087X1L8 192 aa3.84□□□□□ -1.79
TOPBP1-204ENST00000505804 GPR75-ASB3A0A0A6YYF3 556 aa3.84□□□□□ -1.79
TOPBP1-204ENST00000505804 A0A0G2JNG1 304 aa3.84□□□□□ -1.79
TOPBP1-204ENST00000505804 H0YIN7 160 aa3.84□□□□□ -1.79
TOPBP1-204ENST00000505804 SH2B2O14492 632 aaPredicted RBP3.84□□□□□ -1.79
TOPBP1-204ENST00000505804 DVL1O14640 695 aa3.84□□□□□ -1.79
TOPBP1-204ENST00000505804 TO15178 435 aa3.84□□□□□ -1.79
TOPBP1-204ENST00000505804 ADAM20O43506 726 aa3.84□□□□□ -1.79
TOPBP1-204ENST00000505804 CREG1O75629 220 aa3.84□□□□□ -1.79
TOPBP1-204ENST00000505804 CSF2RAP15509 400 aa3.84□□□□□ -1.79
TOPBP1-204ENST00000505804 ZNF23P17027 643 aa3.84□□□□□ -1.79
TOPBP1-204ENST00000505804 NR1D1P20393 614 aa3.84□□□□□ -1.79
TOPBP1-204ENST00000505804 MARK3P27448 753 aa3.84□□□□□ -1.79
TOPBP1-204ENST00000505804 RAD52P43351 418 aa3.84□□□□□ -1.79
TOPBP1-204ENST00000505804 ARSEP51690 589 aa3.84□□□□□ -1.79
TOPBP1-204ENST00000505804 DVL1P1P54792 670 aaPredicted RBP3.84□□□□□ -1.79
TOPBP1-204ENST00000505804 MLLT10P55197 1068 aa3.84□□□□□ -1.79
TOPBP1-204ENST00000505804 GAGE2BQ13066 116 aa3.84□□□□□ -1.79
TOPBP1-204ENST00000505804 PRKAA1Q13131 559 aa3.84□□□□□ -1.79
TOPBP1-204ENST00000505804 MELKQ14680 651 aa3.84□□□□□ -1.79
TOPBP1-204ENST00000505804 KIR2DS5Q14953 304 aa3.84□□□□□ -1.79
TOPBP1-204ENST00000505804 ZRSR1Q15695 479 aaKnown RBP3.84□□□□□ -1.79
TOPBP1-204ENST00000505804 C15orf59Q2T9L4 293 aaPredicted RBP3.84□□□□□ -1.79
TOPBP1-204ENST00000505804 GAGE2EQ4V326 116 aa3.84□□□□□ -1.79
TOPBP1-204ENST00000505804 MFSD4BQ5TF39 518 aa3.84□□□□□ -1.79
TOPBP1-204ENST00000505804 GARNL3Q5VVW2 1013 aa3.84□□□□□ -1.79
TOPBP1-204ENST00000505804 GAGE2AQ6NT46 116 aa3.84□□□□□ -1.79
TOPBP1-204ENST00000505804 DNAAF5Q86Y56 855 aa3.84□□□□□ -1.79
TOPBP1-204ENST00000505804 PTOV1Q86YD1 416 aa3.84□□□□□ -1.79
TOPBP1-204ENST00000505804 METTL27Q8N6F8 245 aaPredicted RBP3.84□□□□□ -1.79
TOPBP1-204ENST00000505804 SYT2Q8N9I0 419 aaPredicted RBP3.84□□□□□ -1.79
TOPBP1-204ENST00000505804 MCUQ8NE86 351 aa3.84□□□□□ -1.79
TOPBP1-204ENST00000505804 DMBX1Q8NFW5 382 aa3.84□□□□□ -1.79
TOPBP1-204ENST00000505804 WDR20Q8TBZ3 569 aa3.84□□□□□ -1.79
TOPBP1-204ENST00000505804 ZFAND2BQ8WV99 257 aa3.84□□□□□ -1.79
TOPBP1-204ENST00000505804 SMPDL3BQ92485 455 aa3.84□□□□□ -1.79
TOPBP1-204ENST00000505804 TMCO6Q96DC7 493 aa3.84□□□□□ -1.79
TOPBP1-204ENST00000505804 ABHD8Q96I13 439 aa3.84□□□□□ -1.79
TOPBP1-204ENST00000505804 PRMT6Q96LA8 375 aaPredicted RBP3.84□□□□□ -1.79
TOPBP1-204ENST00000505804 ZNF583Q96ND8 569 aa3.84□□□□□ -1.79
TOPBP1-204ENST00000505804 SLX1AQ9BQ83 275 aa3.84□□□□□ -1.79
TOPBP1-204ENST00000505804 KLHL4Q9C0H6 718 aa3.84□□□□□ -1.79
TOPBP1-204ENST00000505804 MMP27Q9H306 513 aa3.84□□□□□ -1.79
TOPBP1-204ENST00000505804 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.84□□□□□ -1.79
TOPBP1-204ENST00000505804 ANKEF1Q9NU02 776 aa3.84□□□□□ -1.79
TOPBP1-204ENST00000505804 ZFP57Q9NU63 452 aa3.84□□□□□ -1.79
TOPBP1-204ENST00000505804 MIOSQ9NXC5 875 aa3.84□□□□□ -1.79
TOPBP1-204ENST00000505804 PTTG2Q9NZH5 202 aa3.84□□□□□ -1.79
TOPBP1-204ENST00000505804 NPAP1Q9NZP6 1156 aa3.84□□□□□ -1.79
TOPBP1-204ENST00000505804 GAGE2DQ9UEU5 116 aa3.84□□□□□ -1.79
TOPBP1-204ENST00000505804 ICAM5Q9UMF0 924 aa3.84□□□□□ -1.79
TOPBP1-204ENST00000505804 RABGAP1Q9Y3P9 1069 aa3.84□□□□□ -1.79
TOPBP1-204ENST00000505804 ASTN2O75129 1339 aaPredicted RBP3.84□□□□□ -1.79
TOPBP1-204ENST00000505804 IGLV5-45A0A087WSX0 123 aa3.83□□□□□ -1.8
TOPBP1-204ENST00000505804 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.83□□□□□ -1.8
TOPBP1-204ENST00000505804 TEX13DA0A0J9YY54 714 aaPredicted RBP3.83□□□□□ -1.8
TOPBP1-204ENST00000505804 A6NL46 340 aa3.83□□□□□ -1.8
TOPBP1-204ENST00000505804 BMPR1BO00238 502 aa3.83□□□□□ -1.8
TOPBP1-204ENST00000505804 SYNCRIPO60506 623 aaKnown RBP3.83□□□□□ -1.8
TOPBP1-204ENST00000505804 LMX1BO60663 402 aa3.83□□□□□ -1.8
TOPBP1-204ENST00000505804 CTSVO60911 334 aa3.83□□□□□ -1.8
TOPBP1-204ENST00000505804 ZNF432O94892 652 aa3.83□□□□□ -1.8
TOPBP1-204ENST00000505804 BAG4O95429 457 aaKnown RBP3.83□□□□□ -1.8
TOPBP1-204ENST00000505804 IGLV2-11P01706 119 aa3.83□□□□□ -1.8
TOPBP1-204ENST00000505804 TPOP07202 933 aa3.83□□□□□ -1.8
TOPBP1-204ENST00000505804 NR2F1P10589 423 aa3.83□□□□□ -1.8
TOPBP1-204ENST00000505804 GABRA5P31644 462 aa3.83□□□□□ -1.8
TOPBP1-204ENST00000505804 SIRPAP78324 504 aa3.83□□□□□ -1.8
TOPBP1-204ENST00000505804 BAATQ14032 418 aaPredicted RBP3.83□□□□□ -1.8
TOPBP1-204ENST00000505804 RBBP5Q15291 538 aaKnown RBP3.83□□□□□ -1.8
TOPBP1-204ENST00000505804 DUOXA1Q1HG43 343 aa3.83□□□□□ -1.8
TOPBP1-204ENST00000505804 GCNT6Q5T4J0 391 aa3.83□□□□□ -1.8
TOPBP1-204ENST00000505804 NDUFAF5Q5TEU4 345 aa3.83□□□□□ -1.8
TOPBP1-204ENST00000505804 DHRS7BQ6IAN0 325 aaPredicted RBP3.83□□□□□ -1.8
TOPBP1-204ENST00000505804 FAM109BQ6ICB4 259 aaPredicted RBP3.83□□□□□ -1.8
TOPBP1-204ENST00000505804 TMCO3Q6UWJ1 677 aa3.83□□□□□ -1.8
TOPBP1-204ENST00000505804 SMIM29Q86T20 159 aa3.83□□□□□ -1.8
TOPBP1-204ENST00000505804 ADIPOR2Q86V24 386 aa3.83□□□□□ -1.8
TOPBP1-204ENST00000505804 LONP2Q86WA8 852 aa3.83□□□□□ -1.8
TOPBP1-204ENST00000505804 GUF1Q8N442 669 aaKnown RBP3.83□□□□□ -1.8
TOPBP1-204ENST00000505804 FBXO39Q8N4B4 442 aa3.83□□□□□ -1.8
TOPBP1-204ENST00000505804 MINDY1Q8N5J2 469 aa3.83□□□□□ -1.8
TOPBP1-204ENST00000505804 AVL9Q8NBF6 648 aa3.83□□□□□ -1.8
TOPBP1-204ENST00000505804 SLC24A4Q8NFF2 622 aa3.83□□□□□ -1.8
TOPBP1-204ENST00000505804 PTERQ96BW5 349 aa3.83□□□□□ -1.8
TOPBP1-204ENST00000505804 INPP4AQ96PE3 977 aaPredicted RBP3.83□□□□□ -1.8
TOPBP1-204ENST00000505804 C16orf70Q9BSU1 422 aa3.83□□□□□ -1.8
TOPBP1-204ENST00000505804 APOL6Q9BWW8 343 aa3.83□□□□□ -1.8
TOPBP1-204ENST00000505804 HHATLQ9HCP6 504 aa3.83□□□□□ -1.8
TOPBP1-204ENST00000505804 TCF7L2Q9NQB0 619 aa3.83□□□□□ -1.8
TOPBP1-204ENST00000505804 TAAR2Q9P1P5 351 aa3.83□□□□□ -1.8
TOPBP1-204ENST00000505804 CPSF2Q9P2I0 782 aaKnown RBP3.83□□□□□ -1.8
TOPBP1-204ENST00000505804 PASKQ96RG2 1323 aa3.83□□□□□ -1.8
TOPBP1-204ENST00000505804 TCF20Q9UGU0 1960 aaKnown RBP3.82□□□□□ -1.8
TOPBP1-204ENST00000505804 PRSS51A0A1B0GVH4 220 aa3.82□□□□□ -1.8
TOPBP1-204ENST00000505804 hCG_1809904A0A1W2PP81 198 aa3.82□□□□□ -1.8
TOPBP1-204ENST00000505804 A0A1W2PPE2 198 aa3.82□□□□□ -1.8
TOPBP1-204ENST00000505804 A0A1W2PR64 198 aa3.82□□□□□ -1.8
TOPBP1-204ENST00000505804 GLOD5A6NK44 160 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms