RNA–Protein interactions for RNA: ENST00000498653.5

FXN-205, Transcript of frataxin, humanhuman

TSL 1 (best) BASIC

Gene FXN, Length 856 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-205ENST00000498653 ALS2CR12Q96Q35 445 aa5.12□□□□□ -1.59
FXN-205ENST00000498653 SLC2A13Q96QE2 648 aa5.12□□□□□ -1.59
FXN-205ENST00000498653 CDK5RAP1Q96SZ6 601 aaKnown RBP5.12□□□□□ -1.59
FXN-205ENST00000498653 NCAPGQ9BPX3 1015 aa5.12□□□□□ -1.59
FXN-205ENST00000498653 CNPY3Q9BT09 278 aa5.12□□□□□ -1.59
FXN-205ENST00000498653 SLC13A1Q9BZW2 595 aa5.12□□□□□ -1.59
FXN-205ENST00000498653 NACA2Q9H009 215 aa5.12□□□□□ -1.59
FXN-205ENST00000498653 BRD8Q9H0E9 1235 aa5.12□□□□□ -1.59
FXN-205ENST00000498653 ZNF552Q9H707 407 aaPredicted RBP5.12□□□□□ -1.59
FXN-205ENST00000498653 NMUR1Q9HB89 426 aa5.12□□□□□ -1.59
FXN-205ENST00000498653 RAD18Q9NS91 495 aa5.12□□□□□ -1.59
FXN-205ENST00000498653 KCND1Q9NSA2 647 aa5.12□□□□□ -1.59
FXN-205ENST00000498653 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.12□□□□□ -1.59
FXN-205ENST00000498653 TMEM51Q9NW97 253 aa5.12□□□□□ -1.59
FXN-205ENST00000498653 SIDT1Q9NXL6 827 aaKnown RBP5.12□□□□□ -1.59
FXN-205ENST00000498653 CLIC5Q9NZA1 410 aa5.12□□□□□ -1.59
FXN-205ENST00000498653 TRIM10Q9UDY6 481 aa5.12□□□□□ -1.59
FXN-205ENST00000498653 RASAL2Q9UJF2 1139 aa5.12□□□□□ -1.59
FXN-205ENST00000498653 ANAPC7Q9UJX3 599 aa5.12□□□□□ -1.59
FXN-205ENST00000498653 TMEM59LQ9UK28 342 aa5.12□□□□□ -1.59
FXN-205ENST00000498653 STAP1Q9ULZ2 295 aa5.12□□□□□ -1.59
FXN-205ENST00000498653 L3MBTL1Q9Y468 752 aa5.12□□□□□ -1.59
FXN-205ENST00000498653 DUSP10Q9Y6W6 482 aa5.12□□□□□ -1.59
FXN-205ENST00000498653 HERC1Q15751 4861 aa5.12□□□□□ -1.59
FXN-205ENST00000498653 KIAA1109Q2LD37 5005 aa5.11□□□□□ -1.59
FXN-205ENST00000498653 SYNJ2BP-COX16A0A087WUM0 186 aa5.11□□□□□ -1.59
FXN-205ENST00000498653 EDDM13A0A1B0GTR0 161 aa5.11□□□□□ -1.59
FXN-205ENST00000498653 NKX2-6A6NCS4 301 aa5.11□□□□□ -1.59
FXN-205ENST00000498653 USP27XA6NNY8 438 aa5.11□□□□□ -1.59
FXN-205ENST00000498653 M0QYT0 321 aa5.11□□□□□ -1.59
FXN-205ENST00000498653 SOCS6O14544 535 aa5.11□□□□□ -1.59
FXN-205ENST00000498653 MDM4O15151 490 aa5.11□□□□□ -1.59
FXN-205ENST00000498653 KIF5CO60282 957 aa5.11□□□□□ -1.59
FXN-205ENST00000498653 BUB1BO60566 1050 aaPredicted RBP5.11□□□□□ -1.59
FXN-205ENST00000498653 SLC19A2O60779 497 aa5.11□□□□□ -1.59
FXN-205ENST00000498653 PROSCO94903 275 aa5.11□□□□□ -1.59
FXN-205ENST00000498653 TRUB2O95900 331 aaKnown RBP5.11□□□□□ -1.59
FXN-205ENST00000498653 FYNP06241 537 aa5.11□□□□□ -1.59
FXN-205ENST00000498653 ATP5BP06576 529 aaKnown RBP5.11□□□□□ -1.59
FXN-205ENST00000498653 GSTP1P09211 210 aaKnown RBP5.11□□□□□ -1.59
FXN-205ENST00000498653 MSNP26038 577 aaKnown RBP5.11□□□□□ -1.59
FXN-205ENST00000498653 ARNTP27540 789 aa5.11□□□□□ -1.59
FXN-205ENST00000498653 PTPN4P29074 926 aa5.11□□□□□ -1.59
FXN-205ENST00000498653 NOS3P29474 1203 aa5.11□□□□□ -1.59
FXN-205ENST00000498653 CD70P32970 193 aa5.11□□□□□ -1.59
FXN-205ENST00000498653 ATP5C1P36542 298 aaKnown RBP5.11□□□□□ -1.59
FXN-205ENST00000498653 FLT3P36888 993 aa5.11□□□□□ -1.59
FXN-205ENST00000498653 SLC1A1P43005 524 aa5.11□□□□□ -1.59
FXN-205ENST00000498653 SSR1P43307 286 aaKnown RBP5.11□□□□□ -1.59
FXN-205ENST00000498653 PTPN9P43378 593 aa5.11□□□□□ -1.59
FXN-205ENST00000498653 TAGLNQ01995 201 aaKnown RBP5.11□□□□□ -1.59
FXN-205ENST00000498653 OGDHQ02218 1023 aa5.11□□□□□ -1.59
FXN-205ENST00000498653 DEUP1Q05D60 604 aa5.11□□□□□ -1.59
FXN-205ENST00000498653 EFEMP1Q12805 493 aa5.11□□□□□ -1.59
FXN-205ENST00000498653 CDC16Q13042 620 aa5.11□□□□□ -1.59
FXN-205ENST00000498653 ARHGEF7Q14155 803 aa5.11□□□□□ -1.59
FXN-205ENST00000498653 ELAVL3Q14576 367 aaKnown RBP5.11□□□□□ -1.59
FXN-205ENST00000498653 ELOCQ15369 112 aa5.11□□□□□ -1.59
FXN-205ENST00000498653 HADHQ16836 314 aaKnown RBP5.11□□□□□ -1.59
FXN-205ENST00000498653 SLC25A52Q3SY17 297 aa5.11□□□□□ -1.59
FXN-205ENST00000498653 CCDC14Q49A88 953 aa5.11□□□□□ -1.59
FXN-205ENST00000498653 ZNF569Q5MCW4 686 aa5.11□□□□□ -1.59
FXN-205ENST00000498653 EXOSC6Q5RKV6 272 aaKnown RBP5.11□□□□□ -1.59
FXN-205ENST00000498653 SYPL2Q5VXT5 272 aa5.11□□□□□ -1.59
FXN-205ENST00000498653 NKAIN2Q5VXU1 208 aa5.11□□□□□ -1.59
FXN-205ENST00000498653 B3GNTL1Q67FW5 361 aaPredicted RBP5.11□□□□□ -1.59
FXN-205ENST00000498653 C11orf63Q6NUN7 778 aa5.11□□□□□ -1.59
FXN-205ENST00000498653 MSANTD2Q6P1R3 559 aa5.11□□□□□ -1.59
FXN-205ENST00000498653 KLHDC10Q6PID8 442 aa5.11□□□□□ -1.59
FXN-205ENST00000498653 PRSS57Q6UWY2 283 aa5.11□□□□□ -1.59
FXN-205ENST00000498653 STRADAQ7RTN6 431 aa5.11□□□□□ -1.59
FXN-205ENST00000498653 YTHDF3Q7Z739 585 aaKnown RBP5.11□□□□□ -1.59
FXN-205ENST00000498653 DAAM2Q86T65 1068 aa5.11□□□□□ -1.59
FXN-205ENST00000498653 ZSCAN30Q86W11 494 aa5.11□□□□□ -1.59
FXN-205ENST00000498653 FAM217AQ8IXS0 508 aa5.11□□□□□ -1.59
FXN-205ENST00000498653 SYCE1Q8N0S2 351 aa5.11□□□□□ -1.59
FXN-205ENST00000498653 C17orf53Q8N3J3 647 aaPredicted RBP5.11□□□□□ -1.59
FXN-205ENST00000498653 DQX1Q8TE96 717 aaKnown RBP5.11□□□□□ -1.59
FXN-205ENST00000498653 PPP4R1Q8TF05 950 aa5.11□□□□□ -1.59
FXN-205ENST00000498653 FNIP1Q8TF40 1166 aa5.11□□□□□ -1.59
FXN-205ENST00000498653 FAM172AQ8WUF8 416 aa5.11□□□□□ -1.59
FXN-205ENST00000498653 RNF34Q969K3 372 aa5.11□□□□□ -1.59
FXN-205ENST00000498653 TMEM125Q96AQ2 219 aa5.11□□□□□ -1.59
FXN-205ENST00000498653 SDCCAG3Q96C92 435 aa5.11□□□□□ -1.59
FXN-205ENST00000498653 CFAP57Q96MR6 1250 aa5.11□□□□□ -1.59
FXN-205ENST00000498653 SERPINB11Q96P15 392 aa5.11□□□□□ -1.59
FXN-205ENST00000498653 TAAR6Q96RI8 345 aa5.11□□□□□ -1.59
FXN-205ENST00000498653 TBCBQ99426 244 aa5.11□□□□□ -1.59
FXN-205ENST00000498653 NPY6RQ99463 290 aa5.11□□□□□ -1.59
FXN-205ENST00000498653 KLF6Q99612 283 aaPredicted RBP5.11□□□□□ -1.59
FXN-205ENST00000498653 ZNF696Q9H7X3 374 aa5.11□□□□□ -1.59
FXN-205ENST00000498653 FAM204AQ9H8W3 233 aa5.11□□□□□ -1.59
FXN-205ENST00000498653 OSER1Q9NX31 292 aa5.11□□□□□ -1.59
FXN-205ENST00000498653 COX16Q9P0S2 106 aa5.11□□□□□ -1.59
FXN-205ENST00000498653 PDP2Q9P2J9 529 aa5.11□□□□□ -1.59
FXN-205ENST00000498653 SFMBT1Q9UHJ3 866 aa5.11□□□□□ -1.59
FXN-205ENST00000498653 IPO11Q9UI26 975 aaKnown RBP5.11□□□□□ -1.59
FXN-205ENST00000498653 NUDT5Q9UKK9 219 aa5.11□□□□□ -1.59
FXN-205ENST00000498653 LYSTQ99698 3801 aa5.1□□□□□ -1.59
FXN-205ENST00000498653 A0A087X1B8 175 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms