RNA–Protein interactions for RNA: ENST00000498466.1

CCDC58-207, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 683 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-207ENST00000498466 CNTD1Q8N815 330 aa13.6□□□□□ -0.23
CCDC58-207ENST00000498466 BRSK1Q8TDC3 778 aa13.6□□□□□ -0.23
CCDC58-207ENST00000498466 TRIB3Q96RU7 358 aa13.6□□□□□ -0.23
CCDC58-207ENST00000498466 ZNF670Q9BS34 389 aa13.6□□□□□ -0.23
CCDC58-207ENST00000498466 TLR10Q9BXR5 811 aa13.6□□□□□ -0.23
CCDC58-207ENST00000498466 ILKAPQ9H0C8 392 aaPredicted RBP13.6□□□□□ -0.23
CCDC58-207ENST00000498466 THAP2Q9H0W7 228 aa13.6□□□□□ -0.23
CCDC58-207ENST00000498466 BPIFA1Q9NP55 256 aa13.6□□□□□ -0.23
CCDC58-207ENST00000498466 LATS2Q9NRM7 1088 aa13.6□□□□□ -0.23
CCDC58-207ENST00000498466 C5AR2Q9P296 337 aa13.6□□□□□ -0.23
CCDC58-207ENST00000498466 B3GNT3Q9Y2A9 372 aa13.6□□□□□ -0.23
CCDC58-207ENST00000498466 CFAP20Q9Y6A4 193 aaKnown RBP13.6□□□□□ -0.23
CCDC58-207ENST00000498466 OR6C74A6NCV1 312 aa13.59□□□□□ -0.23
CCDC58-207ENST00000498466 MYO1FO00160 1098 aa13.59□□□□□ -0.23
CCDC58-207ENST00000498466 POP7O75817 140 aaKnown RBP13.59□□□□□ -0.23
CCDC58-207ENST00000498466 ARCN1P48444 511 aaKnown RBP13.59□□□□□ -0.23
CCDC58-207ENST00000498466 DMPKQ09013 629 aa13.59□□□□□ -0.23
CCDC58-207ENST00000498466 SLC10A2Q12908 348 aaPredicted RBP13.59□□□□□ -0.23
CCDC58-207ENST00000498466 ABRQ12979 859 aa13.59□□□□□ -0.23
CCDC58-207ENST00000498466 ZBTB17Q13105 803 aa13.59□□□□□ -0.23
CCDC58-207ENST00000498466 XRCC4Q13426 336 aa13.59□□□□□ -0.23
CCDC58-207ENST00000498466 FAM182AQ5T1J6 154 aa13.59□□□□□ -0.23
CCDC58-207ENST00000498466 LYPLAL1Q5VWZ2 237 aa13.59□□□□□ -0.23
CCDC58-207ENST00000498466 FBXO38Q6PIJ6 1188 aa13.59□□□□□ -0.23
CCDC58-207ENST00000498466 FAM83HQ6ZRV2 1179 aaPredicted RBP13.59□□□□□ -0.23
CCDC58-207ENST00000498466 RAB43Q86YS6 212 aa13.59□□□□□ -0.23
CCDC58-207ENST00000498466 SYTL1Q8IYJ3 562 aa13.59□□□□□ -0.23
CCDC58-207ENST00000498466 SLC34A3Q8N130 599 aa13.59□□□□□ -0.23
CCDC58-207ENST00000498466 ZNF830Q96NB3 372 aaPredicted RBP13.59□□□□□ -0.23
CCDC58-207ENST00000498466 RANBP9Q96S59 729 aa13.59□□□□□ -0.23
CCDC58-207ENST00000498466 CEP41Q9BYV8 373 aa13.59□□□□□ -0.23
CCDC58-207ENST00000498466 ZCCHC2Q9C0B9 1178 aaKnown RBP13.59□□□□□ -0.23
CCDC58-207ENST00000498466 SLC7A5P2Q9GIP4 190 aa13.59□□□□□ -0.23
CCDC58-207ENST00000498466 CBX8Q9HC52 389 aa13.59□□□□□ -0.23
CCDC58-207ENST00000498466 ANO10Q9NW15 660 aa13.59□□□□□ -0.23
CCDC58-207ENST00000498466 MED13Q9UHV7 2174 aa13.59□□□□□ -0.23
CCDC58-207ENST00000498466 HIVEP3Q5T1R4 2406 aa13.59□□□□□ -0.23
CCDC58-207ENST00000498466 ANKRD17O75179 2603 aaKnown RBP13.58□□□□□ -0.24
CCDC58-207ENST00000498466 AURKAO14965 403 aa13.58□□□□□ -0.24
CCDC58-207ENST00000498466 LCA5LO95447 670 aa13.58□□□□□ -0.24
CCDC58-207ENST00000498466 ALPPP05187 535 aa13.58□□□□□ -0.24
CCDC58-207ENST00000498466 CAPN1P07384 714 aa13.58□□□□□ -0.24
CCDC58-207ENST00000498466 MTHFD1P11586 935 aaKnown RBP13.58□□□□□ -0.24
CCDC58-207ENST00000498466 POU3F2P20265 443 aaPredicted RBP13.58□□□□□ -0.24
CCDC58-207ENST00000498466 PBLDP30039 288 aaPredicted RBP13.58□□□□□ -0.24
CCDC58-207ENST00000498466 OTX2P32243 289 aa13.58□□□□□ -0.24
CCDC58-207ENST00000498466 RORAP35398 523 aa13.58□□□□□ -0.24
CCDC58-207ENST00000498466 KPNA2P52292 529 aaKnown RBP13.58□□□□□ -0.24
CCDC58-207ENST00000498466 IFI35P80217 286 aaPredicted RBP13.58□□□□□ -0.24
CCDC58-207ENST00000498466 NFE2L1Q14494 772 aa13.58□□□□□ -0.24
CCDC58-207ENST00000498466 NAA30Q147X3 362 aaPredicted RBP13.58□□□□□ -0.24
CCDC58-207ENST00000498466 PDK2Q15119 407 aa13.58□□□□□ -0.24
CCDC58-207ENST00000498466 CCDC70Q6NSX1 233 aa13.58□□□□□ -0.24
CCDC58-207ENST00000498466 SASS6Q6UVJ0 657 aa13.58□□□□□ -0.24
CCDC58-207ENST00000498466 FAM198BQ6UWH4 519 aa13.58□□□□□ -0.24
CCDC58-207ENST00000498466 NT5DC3Q86UY8 548 aa13.58□□□□□ -0.24
CCDC58-207ENST00000498466 MAP7D3Q8IWC1 876 aa13.58□□□□□ -0.24
CCDC58-207ENST00000498466 CARFQ8N187 725 aa13.58□□□□□ -0.24
CCDC58-207ENST00000498466 PQLC3Q8N755 202 aa13.58□□□□□ -0.24
CCDC58-207ENST00000498466 RASGEF1AQ8N9B8 481 aa13.58□□□□□ -0.24
CCDC58-207ENST00000498466 MOCOSQ96EN8 888 aa13.58□□□□□ -0.24
CCDC58-207ENST00000498466 IMP4Q96G21 291 aaKnown RBP13.58□□□□□ -0.24
CCDC58-207ENST00000498466 PPM1MQ96MI6 270 aa13.58□□□□□ -0.24
CCDC58-207ENST00000498466 AGAP3Q96P47 875 aa13.58□□□□□ -0.24
CCDC58-207ENST00000498466 XPO4Q9C0E2 1151 aaKnown RBP13.58□□□□□ -0.24
CCDC58-207ENST00000498466 HSD3B7Q9H2F3 369 aa13.58□□□□□ -0.24
CCDC58-207ENST00000498466 ACTR5Q9H9F9 607 aaPredicted RBP13.58□□□□□ -0.24
CCDC58-207ENST00000498466 PCMTD2Q9NV79 361 aa13.58□□□□□ -0.24
CCDC58-207ENST00000498466 TMEM63CQ9P1W3 806 aa13.58□□□□□ -0.24
CCDC58-207ENST00000498466 BTRCQ9Y297 605 aa13.58□□□□□ -0.24
CCDC58-207ENST00000498466 COPG1Q9Y678 874 aaKnown RBP13.58□□□□□ -0.24
CCDC58-207ENST00000498466 ARHGAP10A1A4S6 786 aa13.57□□□□□ -0.24
CCDC58-207ENST00000498466 OR2AG2A6NM03 316 aa13.57□□□□□ -0.24
CCDC58-207ENST00000498466 TMEM150CB9EJG8 249 aa13.57□□□□□ -0.24
CCDC58-207ENST00000498466 C9J4A7 227 aa13.57□□□□□ -0.24
CCDC58-207ENST00000498466 CYP2A7P20853 494 aa13.57□□□□□ -0.24
CCDC58-207ENST00000498466 CDH3P22223 829 aa13.57□□□□□ -0.24
CCDC58-207ENST00000498466 HNRNPH3P31942 346 aaKnown RBP13.57□□□□□ -0.24
CCDC58-207ENST00000498466 GLRBP48167 497 aa13.57□□□□□ -0.24
CCDC58-207ENST00000498466 CTSCP53634 463 aa13.57□□□□□ -0.24
CCDC58-207ENST00000498466 PPIDQ08752 370 aaKnown RBP13.57□□□□□ -0.24
CCDC58-207ENST00000498466 AP1B1Q10567 949 aa13.57□□□□□ -0.24
CCDC58-207ENST00000498466 NCF4Q15080 339 aa13.57□□□□□ -0.24
CCDC58-207ENST00000498466 PTCHD3Q3KNS1 767 aa13.57□□□□□ -0.24
CCDC58-207ENST00000498466 ZFYVE27Q5T4F4 411 aa13.57□□□□□ -0.24
CCDC58-207ENST00000498466 HGSNATQ68CP4 663 aa13.57□□□□□ -0.24
CCDC58-207ENST00000498466 DUS1LQ6P1R4 473 aaKnown RBP13.57□□□□□ -0.24
CCDC58-207ENST00000498466 TMEM220Q6QAJ8 160 aa13.57□□□□□ -0.24
CCDC58-207ENST00000498466 CLEC1AQ8NC01 280 aa13.57□□□□□ -0.24
CCDC58-207ENST00000498466 MARVELD3Q96A59 401 aa13.57□□□□□ -0.24
CCDC58-207ENST00000498466 C12orf66Q96MD2 445 aa13.57□□□□□ -0.24
CCDC58-207ENST00000498466 SRPK1Q96SB4 655 aaKnown RBP13.57□□□□□ -0.24
CCDC58-207ENST00000498466 INSM2Q96T92 566 aaPredicted RBP13.57□□□□□ -0.24
CCDC58-207ENST00000498466 IGSF5Q9NSI5 407 aa13.57□□□□□ -0.24
CCDC58-207ENST00000498466 PADI2Q9Y2J8 665 aa13.57□□□□□ -0.24
CCDC58-207ENST00000498466 SPO11Q9Y5K1 396 aa13.57□□□□□ -0.24
CCDC58-207ENST00000498466 FBN2P35556 2912 aa13.57□□□□□ -0.24
CCDC58-207ENST00000498466 OTOGQ6ZRI0 2925 aa13.57□□□□□ -0.24
CCDC58-207ENST00000498466 SLC9B1P1A6NJY1 282 aa13.56□□□□□ -0.24
CCDC58-207ENST00000498466 HNRNPRO43390 633 aaKnown RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms