RNA–Protein interactions for RNA: ENST00000496342.1

RHBDD3-207, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-207ENST00000496342 IMP3Q9NV31 184 aaKnown RBP17.21■□□□□ 0.35
RHBDD3-207ENST00000496342 NEU2Q9Y3R4 380 aa17.21■□□□□ 0.35
RHBDD3-207ENST00000496342 PCDHGA8Q9Y5G5 932 aa17.21■□□□□ 0.35
RHBDD3-207ENST00000496342 PKD1L2Q7Z442 2459 aa17.21■□□□□ 0.34
RHBDD3-207ENST00000496342 ANKRD11Q6UB99 2663 aaPredicted RBP17.2■□□□□ 0.34
RHBDD3-207ENST00000496342 LILRA5A6NI73 299 aa17.2■□□□□ 0.34
RHBDD3-207ENST00000496342 CDRT15L2A8MXV6 281 aa17.2■□□□□ 0.34
RHBDD3-207ENST00000496342 CFAP99D6REC4 459 aa17.2■□□□□ 0.34
RHBDD3-207ENST00000496342 OR1I1O60431 355 aa17.2■□□□□ 0.34
RHBDD3-207ENST00000496342 AVILO75366 819 aa17.2■□□□□ 0.34
RHBDD3-207ENST00000496342 JMJD7P0C870 316 aa17.2■□□□□ 0.34
RHBDD3-207ENST00000496342 RALBP11234 206 aa17.2■□□□□ 0.34
RHBDD3-207ENST00000496342 RBMS1P29558 406 aaKnown RBP17.2■□□□□ 0.34
RHBDD3-207ENST00000496342 EIF2S3P41091 472 aaKnown RBP17.2■□□□□ 0.34
RHBDD3-207ENST00000496342 MAPK10P53779 464 aa17.2■□□□□ 0.34
RHBDD3-207ENST00000496342 GPLD1P80108 840 aa17.2■□□□□ 0.34
RHBDD3-207ENST00000496342 ACVR1Q04771 509 aa17.2■□□□□ 0.34
RHBDD3-207ENST00000496342 COL28A1Q2UY09 1125 aa17.2■□□□□ 0.34
RHBDD3-207ENST00000496342 AFTPHQ6ULP2 937 aa17.2■□□□□ 0.34
RHBDD3-207ENST00000496342 NAPRTQ6XQN6 538 aa17.2■□□□□ 0.34
RHBDD3-207ENST00000496342 JAMLQ86YT9 394 aa17.2■□□□□ 0.34
RHBDD3-207ENST00000496342 CFAP206Q8IYR0 622 aa17.2■□□□□ 0.34
RHBDD3-207ENST00000496342 OR4D9Q8NGE8 314 aa17.2■□□□□ 0.34
RHBDD3-207ENST00000496342 OR6P1Q8NGX9 317 aa17.2■□□□□ 0.34
RHBDD3-207ENST00000496342 CPT1BQ92523 772 aa17.2■□□□□ 0.34
RHBDD3-207ENST00000496342 ZNF514Q96K75 400 aaPredicted RBP17.2■□□□□ 0.34
RHBDD3-207ENST00000496342 INSM2Q96T92 566 aaPredicted RBP17.2■□□□□ 0.34
RHBDD3-207ENST00000496342 POT1Q9NUX5 634 aa17.2■□□□□ 0.34
RHBDD3-207ENST00000496342 MARCH4Q9P2E8 410 aaPredicted RBP17.2■□□□□ 0.34
RHBDD3-207ENST00000496342 DNMT3AQ9Y6K1 912 aaPredicted RBP17.2■□□□□ 0.34
RHBDD3-207ENST00000496342 CELSR3Q9NYQ7 3312 aa17.19■□□□□ 0.34
RHBDD3-207ENST00000496342 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.19■□□□□ 0.34
RHBDD3-207ENST00000496342 GOLGA8MH3BSY2 632 aa17.19■□□□□ 0.34
RHBDD3-207ENST00000496342 ZZEF1O43149 2961 aa17.19■□□□□ 0.34
RHBDD3-207ENST00000496342 HALP42357 657 aa17.19■□□□□ 0.34
RHBDD3-207ENST00000496342 PREPP48147 710 aa17.19■□□□□ 0.34
RHBDD3-207ENST00000496342 EPHA4P54764 986 aa17.19■□□□□ 0.34
RHBDD3-207ENST00000496342 PPP1CAP62136 330 aa17.19■□□□□ 0.34
RHBDD3-207ENST00000496342 ZNF658BQ4V348 819 aaPredicted RBP17.19■□□□□ 0.34
RHBDD3-207ENST00000496342 PCID2Q5JVF3 399 aa17.19■□□□□ 0.34
RHBDD3-207ENST00000496342 METRNLQ641Q3 311 aa17.19■□□□□ 0.34
RHBDD3-207ENST00000496342 TMEM71Q6P5X7 295 aa17.19■□□□□ 0.34
RHBDD3-207ENST00000496342 LRRC8BQ6P9F7 803 aa17.19■□□□□ 0.34
RHBDD3-207ENST00000496342 C4orf22Q6V702 233 aa17.19■□□□□ 0.34
RHBDD3-207ENST00000496342 HM13Q8TCT9 377 aa17.19■□□□□ 0.34
RHBDD3-207ENST00000496342 SH3KBP1Q96B97 665 aa17.19■□□□□ 0.34
RHBDD3-207ENST00000496342 LINC00615Q96LM1 132 aaPredicted RBP17.19■□□□□ 0.34
RHBDD3-207ENST00000496342 C12orf66Q96MD2 445 aa17.19■□□□□ 0.34
RHBDD3-207ENST00000496342 ZNF578Q96N58 590 aaPredicted RBP17.19■□□□□ 0.34
RHBDD3-207ENST00000496342 NAP1L3Q99457 506 aaPredicted RBP17.19■□□□□ 0.34
RHBDD3-207ENST00000496342 NRTNQ99748 197 aa17.19■□□□□ 0.34
RHBDD3-207ENST00000496342 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.19■□□□□ 0.34
RHBDD3-207ENST00000496342 COG4Q9H9E3 785 aa17.19■□□□□ 0.34
RHBDD3-207ENST00000496342 SLC40A1Q9NP59 571 aa17.19■□□□□ 0.34
RHBDD3-207ENST00000496342 THSD1Q9NS62 852 aa17.19■□□□□ 0.34
RHBDD3-207ENST00000496342 TMX2-CTNND1H3BSU7 103 aa17.18■□□□□ 0.34
RHBDD3-207ENST00000496342 ZW10O43264 779 aa17.18■□□□□ 0.34
RHBDD3-207ENST00000496342 PRAMEF10O60809 474 aa17.18■□□□□ 0.34
RHBDD3-207ENST00000496342 KCNJ13O60928 360 aa17.18■□□□□ 0.34
RHBDD3-207ENST00000496342 ITGA2BP08514 1039 aa17.18■□□□□ 0.34
RHBDD3-207ENST00000496342 F7P08709 466 aaPredicted RBP17.18■□□□□ 0.34
RHBDD3-207ENST00000496342 MTHFD1P11586 935 aaKnown RBP17.18■□□□□ 0.34
RHBDD3-207ENST00000496342 ITGB6P18564 788 aa17.18■□□□□ 0.34
RHBDD3-207ENST00000496342 PDHA2P29803 388 aa17.18■□□□□ 0.34
RHBDD3-207ENST00000496342 SLC5A2P31639 672 aa17.18■□□□□ 0.34
RHBDD3-207ENST00000496342 LEPRP48357 1165 aaKnown RBP17.18■□□□□ 0.34
RHBDD3-207ENST00000496342 PCBP4P57723 403 aaKnown RBP17.18■□□□□ 0.34
RHBDD3-207ENST00000496342 PRAMEP78395 509 aa17.18■□□□□ 0.34
RHBDD3-207ENST00000496342 EIF3IQ13347 325 aaKnown RBP17.18■□□□□ 0.34
RHBDD3-207ENST00000496342 SQSTM1Q13501 440 aa17.18■□□□□ 0.34
RHBDD3-207ENST00000496342 BRD3Q15059 726 aa17.18■□□□□ 0.34
RHBDD3-207ENST00000496342 IGF2-ASQ6U949 168 aa17.18■□□□□ 0.34
RHBDD3-207ENST00000496342 CAND1Q86VP6 1230 aaKnown RBP17.18■□□□□ 0.34
RHBDD3-207ENST00000496342 LSMEM2Q8N112 164 aa17.18■□□□□ 0.34
RHBDD3-207ENST00000496342 OR4L1Q8NH43 312 aa17.18■□□□□ 0.34
RHBDD3-207ENST00000496342 LKAAEAR1Q8TD35 194 aa17.18■□□□□ 0.34
RHBDD3-207ENST00000496342 RNF31Q96EP0 1072 aa17.18■□□□□ 0.34
RHBDD3-207ENST00000496342 MFSD3Q96ES6 412 aa17.18■□□□□ 0.34
RHBDD3-207ENST00000496342 NAPGQ99747 312 aaPredicted RBP17.18■□□□□ 0.34
RHBDD3-207ENST00000496342 TREX1Q9NSU2 369 aa17.18■□□□□ 0.34
RHBDD3-207ENST00000496342 OCIAD1Q9NX40 245 aa17.18■□□□□ 0.34
RHBDD3-207ENST00000496342 BFARQ9NZS9 450 aa17.18■□□□□ 0.34
RHBDD3-207ENST00000496342 FOXJ2Q9P0K8 574 aa17.18■□□□□ 0.34
RHBDD3-207ENST00000496342 RIMKLBQ9ULI2 386 aa17.18■□□□□ 0.34
RHBDD3-207ENST00000496342 SNRNP200O75643 2136 aaKnown RBP17.18■□□□□ 0.34
RHBDD3-207ENST00000496342 A0A087WV48 116 aa17.17■□□□□ 0.34
RHBDD3-207ENST00000496342 GOLGA6L10A0A0M3HER8 536 aa17.17■□□□□ 0.34
RHBDD3-207ENST00000496342 GOLGA8KD6RF30 607 aa17.17■□□□□ 0.34
RHBDD3-207ENST00000496342 GOLGA8TH3BQL2 631 aa17.17■□□□□ 0.34
RHBDD3-207ENST00000496342 CES2O00748 559 aa17.17■□□□□ 0.34
RHBDD3-207ENST00000496342 UBXN7O94888 489 aa17.17■□□□□ 0.34
RHBDD3-207ENST00000496342 SLC35G4P0C7Q5 338 aa17.17■□□□□ 0.34
RHBDD3-207ENST00000496342 TCP1P17987 556 aaKnown RBP17.17■□□□□ 0.34
RHBDD3-207ENST00000496342 ARNTP27540 789 aa17.17■□□□□ 0.34
RHBDD3-207ENST00000496342 MAGEA6P43360 314 aa17.17■□□□□ 0.34
RHBDD3-207ENST00000496342 FNTAP49354 379 aa17.17■□□□□ 0.34
RHBDD3-207ENST00000496342 ERVPABLB-1P60509 514 aa17.17■□□□□ 0.34
RHBDD3-207ENST00000496342 ITIH4Q14624 930 aa17.17■□□□□ 0.34
RHBDD3-207ENST00000496342 CLPPQ16740 277 aaPredicted RBP17.17■□□□□ 0.34
RHBDD3-207ENST00000496342 CLEC14AQ86T13 490 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms