RNA–Protein interactions for RNA: ENST00000496215.5

COL9A2-211, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-211ENST00000496215 CLCA4Q14CN2 919 aa20.22■□□□□ 0.83
COL9A2-211ENST00000496215 SNAP47Q5SQN1 464 aa20.22■□□□□ 0.83
COL9A2-211ENST00000496215 BROXQ5VW32 411 aa20.22■□□□□ 0.83
COL9A2-211ENST00000496215 HM13Q8TCT9 377 aa20.22■□□□□ 0.83
COL9A2-211ENST00000496215 TBRG4Q969Z0 631 aaKnown RBP eCLIP20.22■□□□□ 0.83
COL9A2-211ENST00000496215 PDLIM2Q96JY6 352 aa20.22■□□□□ 0.83
COL9A2-211ENST00000496215 LINC00615Q96LM1 132 aaPredicted RBP20.22■□□□□ 0.83
COL9A2-211ENST00000496215 DPH1Q9BZG8 443 aa20.22■□□□□ 0.83
COL9A2-211ENST00000496215 SLC40A1Q9NP59 571 aa20.22■□□□□ 0.83
COL9A2-211ENST00000496215 TRMT1Q9NXH9 659 aaKnown RBP20.22■□□□□ 0.83
COL9A2-211ENST00000496215 TCAF1Q9Y4C2 921 aa20.22■□□□□ 0.83
COL9A2-211ENST00000496215 MN1Q10571 1320 aaPredicted RBP20.22■□□□□ 0.83
COL9A2-211ENST00000496215 ADRA1DP25100 572 aa20.21■□□□□ 0.83
COL9A2-211ENST00000496215 CAPZBP47756 277 aa20.21■□□□□ 0.83
COL9A2-211ENST00000496215 RPE65Q16518 533 aa20.21■□□□□ 0.83
COL9A2-211ENST00000496215 DBN1Q16643 649 aa20.21■□□□□ 0.83
COL9A2-211ENST00000496215 TSTD2Q5T7W7 516 aa20.21■□□□□ 0.83
COL9A2-211ENST00000496215 METRNLQ641Q3 311 aa20.21■□□□□ 0.83
COL9A2-211ENST00000496215 AFTPHQ6ULP2 937 aa20.21■□□□□ 0.83
COL9A2-211ENST00000496215 NLRP9Q7RTR0 991 aa20.21■□□□□ 0.83
COL9A2-211ENST00000496215 PLXDC1Q8IUK5 500 aa20.21■□□□□ 0.83
COL9A2-211ENST00000496215 PIANPQ8IYJ0 282 aa20.21■□□□□ 0.83
COL9A2-211ENST00000496215 OR13J1Q8NGT2 312 aa20.21■□□□□ 0.83
COL9A2-211ENST00000496215 GPR150Q8NGU9 434 aa20.21■□□□□ 0.83
COL9A2-211ENST00000496215 MS4A14Q96JA4 679 aa20.21■□□□□ 0.83
COL9A2-211ENST00000496215 WWP1Q9H0M0 922 aa20.21■□□□□ 0.83
COL9A2-211ENST00000496215 PRORYQ9H606 182 aa20.21■□□□□ 0.83
COL9A2-211ENST00000496215 IMP3Q9NV31 184 aaKnown RBP20.21■□□□□ 0.83
COL9A2-211ENST00000496215 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.21■□□□□ 0.83
COL9A2-211ENST00000496215 PDP2Q9P2J9 529 aa20.21■□□□□ 0.83
COL9A2-211ENST00000496215 KLHL3Q9UH77 587 aa20.21■□□□□ 0.83
COL9A2-211ENST00000496215 ACSL5Q9ULC5 683 aa20.21■□□□□ 0.83
COL9A2-211ENST00000496215 RIMKLBQ9ULI2 386 aa20.21■□□□□ 0.83
COL9A2-211ENST00000496215 TTC7AQ9ULT0 858 aaPredicted RBP20.21■□□□□ 0.83
COL9A2-211ENST00000496215 PRAMEF33A0A0G2JMD5 474 aa20.2■□□□□ 0.82
COL9A2-211ENST00000496215 CCDC162PA2VCL2 907 aa20.2■□□□□ 0.82
COL9A2-211ENST00000496215 OR51F1A6NGY5 319 aa20.2■□□□□ 0.82
COL9A2-211ENST00000496215 AP3B1O00203 1094 aa20.2■□□□□ 0.82
COL9A2-211ENST00000496215 NVLO15381 856 aaKnown RBP20.2■□□□□ 0.82
COL9A2-211ENST00000496215 KLK10O43240 276 aa20.2■□□□□ 0.82
COL9A2-211ENST00000496215 PRAMEF10O60809 474 aa20.2■□□□□ 0.82
COL9A2-211ENST00000496215 MTHFD1P11586 935 aaKnown RBP20.2■□□□□ 0.82
COL9A2-211ENST00000496215 TYRP1P17643 537 aa20.2■□□□□ 0.82
COL9A2-211ENST00000496215 FOXN2P32314 431 aa20.2■□□□□ 0.82
COL9A2-211ENST00000496215 TMEM164Q5U3C3 297 aa20.2■□□□□ 0.82
COL9A2-211ENST00000496215 FAM129CQ86XR2 697 aa20.2■□□□□ 0.82
COL9A2-211ENST00000496215 PEX13Q92968 403 aa20.2■□□□□ 0.82
COL9A2-211ENST00000496215 USP7Q93009 1102 aa20.2■□□□□ 0.82
COL9A2-211ENST00000496215 BBC3Q96PG8 261 aaPredicted RBP20.2■□□□□ 0.82
COL9A2-211ENST00000496215 OSBPL9Q96SU4 736 aa20.2■□□□□ 0.82
COL9A2-211ENST00000496215 AP1M1Q9BXS5 423 aa20.2■□□□□ 0.82
COL9A2-211ENST00000496215 OGFRQ9NZT2 677 aa20.2■□□□□ 0.82
COL9A2-211ENST00000496215 SLC2A6Q9UGQ3 507 aa20.2■□□□□ 0.82
COL9A2-211ENST00000496215 ACSL6Q9UKU0 697 aa20.2■□□□□ 0.82
COL9A2-211ENST00000496215 SSUH2Q9Y2M2 353 aa20.2■□□□□ 0.82
COL9A2-211ENST00000496215 A8MU76 341 aa20.19■□□□□ 0.82
COL9A2-211ENST00000496215 CCL4P13236 92 aa20.19■□□□□ 0.82
COL9A2-211ENST00000496215 AMD1P17707 334 aa20.19■□□□□ 0.82
COL9A2-211ENST00000496215 UCNP55089 124 aa20.19■□□□□ 0.82
COL9A2-211ENST00000496215 SESN2P58004 480 aaPredicted RBP20.19■□□□□ 0.82
COL9A2-211ENST00000496215 PRAMEP78395 509 aa20.19■□□□□ 0.82
COL9A2-211ENST00000496215 ACVR1Q04771 509 aa20.19■□□□□ 0.82
COL9A2-211ENST00000496215 ITIH4Q14624 930 aa20.19■□□□□ 0.82
COL9A2-211ENST00000496215 PLCL1Q15111 1095 aa20.19■□□□□ 0.82
COL9A2-211ENST00000496215 TTC27Q6P3X3 843 aa20.19■□□□□ 0.82
COL9A2-211ENST00000496215 C12orf66Q96MD2 445 aa20.19■□□□□ 0.82
COL9A2-211ENST00000496215 SMARCAL1Q9NZC9 954 aa20.19■□□□□ 0.82
COL9A2-211ENST00000496215 FOXJ2Q9P0K8 574 aa20.19■□□□□ 0.82
COL9A2-211ENST00000496215 CFAP20Q9Y6A4 193 aaKnown RBP20.19■□□□□ 0.82
COL9A2-211ENST00000496215 AHCTF1Q8WYP5 2266 aa20.18■□□□□ 0.82
COL9A2-211ENST00000496215 GOLGA6L10A0A0M3HER8 536 aa20.18■□□□□ 0.82
COL9A2-211ENST00000496215 C17orf113A0A1B0GUU1 675 aa20.18■□□□□ 0.82
COL9A2-211ENST00000496215 C9orf172C9J069 976 aa20.18■□□□□ 0.82
COL9A2-211ENST00000496215 QSOX1O00391 747 aa20.18■□□□□ 0.82
COL9A2-211ENST00000496215 AP2A2O94973 939 aa20.18■□□□□ 0.82
COL9A2-211ENST00000496215 GOT2P00505 430 aaKnown RBP20.18■□□□□ 0.82
COL9A2-211ENST00000496215 FGF3P11487 239 aaPredicted RBP20.18■□□□□ 0.82
COL9A2-211ENST00000496215 TPSB2P20231 275 aa20.18■□□□□ 0.82
COL9A2-211ENST00000496215 NSG1P42857 185 aa20.18■□□□□ 0.82
COL9A2-211ENST00000496215 VPS41P49754 854 aa20.18■□□□□ 0.82
COL9A2-211ENST00000496215 GFERP55789 205 aa20.18■□□□□ 0.82
COL9A2-211ENST00000496215 TMPRSS3P57727 454 aa20.18■□□□□ 0.82
COL9A2-211ENST00000496215 CDK16Q00536 496 aa20.18■□□□□ 0.82
COL9A2-211ENST00000496215 TRIP13Q15645 432 aaPredicted RBP20.18■□□□□ 0.82
COL9A2-211ENST00000496215 TPSAB1Q15661 275 aa20.18■□□□□ 0.82
COL9A2-211ENST00000496215 LYPLAL1Q5VWZ2 237 aa20.18■□□□□ 0.82
COL9A2-211ENST00000496215 DUS1LQ6P1R4 473 aaKnown RBP20.18■□□□□ 0.82
COL9A2-211ENST00000496215 XKR5Q6UX68 686 aa20.18■□□□□ 0.82
COL9A2-211ENST00000496215 PACS1Q6VY07 963 aa20.18■□□□□ 0.82
COL9A2-211ENST00000496215 ARHGAP22Q7Z5H3 698 aa20.18■□□□□ 0.82
COL9A2-211ENST00000496215 CFAP206Q8IYR0 622 aa20.18■□□□□ 0.82
COL9A2-211ENST00000496215 CLDN19Q8N6F1 224 aa20.18■□□□□ 0.82
COL9A2-211ENST00000496215 RSC1A1Q92681 617 aa20.18■□□□□ 0.82
COL9A2-211ENST00000496215 HDAC10Q969S8 669 aa20.18■□□□□ 0.82
COL9A2-211ENST00000496215 PMEPA1Q969W9 287 aa20.18■□□□□ 0.82
COL9A2-211ENST00000496215 MAGOHBQ96A72 148 aaKnown RBP20.18■□□□□ 0.82
COL9A2-211ENST00000496215 RMDN2Q96LZ7 410 aa20.18■□□□□ 0.82
COL9A2-211ENST00000496215 ZNF778Q96MU6 729 aa20.18■□□□□ 0.82
COL9A2-211ENST00000496215 CCM2Q9BSQ5 444 aa20.18■□□□□ 0.82
COL9A2-211ENST00000496215 B3GNT4Q9C0J1 378 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms