RNA–Protein interactions for RNA: ENST00000496030.1

APTX-233, Transcript of aprataxin, human

TSL 3

Gene APTX, Length 633 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-233	ENST00000496030	TRMT10B	Q6PF06	316 aa	Known RBP	11.7	□□□□□ -0.54
APTX-233	ENST00000496030	CRTC3	Q6UUV7	619 aa		11.7	□□□□□ -0.54
APTX-233	ENST00000496030	FAM83H	Q6ZRV2	1179 aa	Predicted RBP	11.7	□□□□□ -0.54
APTX-233	ENST00000496030	DET1	Q7L5Y6	550 aa		11.7	□□□□□ -0.54
APTX-233	ENST00000496030	CHST15	Q7LFX5	561 aa	Predicted RBP	11.7	□□□□□ -0.54
APTX-233	ENST00000496030	TAF8	Q7Z7C8	310 aa		11.7	□□□□□ -0.54
APTX-233	ENST00000496030	LRRTM4	Q86VH4	590 aa		11.7	□□□□□ -0.54
APTX-233	ENST00000496030	C17orf82	Q86X59	251 aa	Predicted RBP	11.7	□□□□□ -0.54
APTX-233	ENST00000496030	CCNJL	Q8IV13	435 aa		11.7	□□□□□ -0.54
APTX-233	ENST00000496030	BEND7	Q8N7W2	519 aa	Predicted RBP	11.7	□□□□□ -0.54
APTX-233	ENST00000496030	FAM181A	Q8N9Y4	354 aa		11.7	□□□□□ -0.54
APTX-233	ENST00000496030	SERBP1	Q8NC51	408 aa	Known RBP eCLIP	11.7	□□□□□ -0.54
APTX-233	ENST00000496030	LSM14A	Q8ND56	463 aa	Known RBP	11.7	□□□□□ -0.54
APTX-233	ENST00000496030	FBXO36	Q8NEA4	188 aa		11.7	□□□□□ -0.54
APTX-233	ENST00000496030	RHBDD1	Q8TEB9	315 aa		11.7	□□□□□ -0.54
APTX-233	ENST00000496030	HEXDC	Q8WVB3	486 aa		11.7	□□□□□ -0.54
APTX-233	ENST00000496030	LINC00615	Q96LM1	132 aa	Predicted RBP	11.7	□□□□□ -0.54
APTX-233	ENST00000496030	TIMM29	Q9BSF4	260 aa		11.7	□□□□□ -0.54
APTX-233	ENST00000496030	GSDMC	Q9BYG8	508 aa		11.7	□□□□□ -0.54
APTX-233	ENST00000496030	FOXP3	Q9BZS1	431 aa		11.7	□□□□□ -0.54
APTX-233	ENST00000496030	PHACTR1	Q9C0D0	580 aa		11.7	□□□□□ -0.54
APTX-233	ENST00000496030	P2RY12	Q9H244	342 aa		11.7	□□□□□ -0.54
APTX-233	ENST00000496030	SAYSD1	Q9NPB0	183 aa		11.7	□□□□□ -0.54
APTX-233	ENST00000496030	FAM114A2	Q9NRY5	505 aa		11.7	□□□□□ -0.54
APTX-233	ENST00000496030	TAAR2	Q9P1P5	351 aa		11.7	□□□□□ -0.54
APTX-233	ENST00000496030	TBC1D29	Q9UFV1	150 aa		11.7	□□□□□ -0.54
APTX-233	ENST00000496030	ZC3H7B	Q9UGR2	993 aa	Known RBP	11.7	□□□□□ -0.54
APTX-233	ENST00000496030	DNMT3A	Q9Y6K1	912 aa	Predicted RBP	11.7	□□□□□ -0.54
APTX-233	ENST00000496030	NOBOX	O60393	691 aa		11.69	□□□□□ -0.54
APTX-233	ENST00000496030	C1QA	P02745	245 aa		11.69	□□□□□ -0.54
APTX-233	ENST00000496030	ANXA6	P08133	673 aa		11.69	□□□□□ -0.54
APTX-233	ENST00000496030	F7	P08709	466 aa	Predicted RBP	11.69	□□□□□ -0.54
APTX-233	ENST00000496030	RHOXF2B	P0C7M4	288 aa		11.69	□□□□□ -0.54
APTX-233	ENST00000496030	ERVK-10	P10266	1014 aa		11.69	□□□□□ -0.54
APTX-233	ENST00000496030	PAM	P19021	973 aa		11.69	□□□□□ -0.54
APTX-233	ENST00000496030	GABRB3	P28472	473 aa		11.69	□□□□□ -0.54
APTX-233	ENST00000496030	NSG1	P42857	185 aa		11.69	□□□□□ -0.54
APTX-233	ENST00000496030	PRLHR	P49683	370 aa		11.69	□□□□□ -0.54
APTX-233	ENST00000496030	GPX6	P59796	221 aa		11.69	□□□□□ -0.54
APTX-233	ENST00000496030	CFHR1	Q03591	330 aa		11.69	□□□□□ -0.54
APTX-233	ENST00000496030	DMPK	Q09013	629 aa		11.69	□□□□□ -0.54
APTX-233	ENST00000496030	ILF3	Q12906	894 aa	Known RBP eCLIP	11.69	□□□□□ -0.54
APTX-233	ENST00000496030	HSP90AA5P	Q58FG0	334 aa		11.69	□□□□□ -0.54
APTX-233	ENST00000496030	C6orf132	Q5T0Z8	1188 aa		11.69	□□□□□ -0.54
APTX-233	ENST00000496030	SLC30A9	Q6PML9	568 aa		11.69	□□□□□ -0.54
APTX-233	ENST00000496030	GKN2	Q86XP6	184 aa		11.69	□□□□□ -0.54
APTX-233	ENST00000496030	CILP2	Q8IUL8	1156 aa		11.69	□□□□□ -0.54
APTX-233	ENST00000496030	TRAPPC5	Q8IUR0	188 aa		11.69	□□□□□ -0.54
APTX-233	ENST00000496030	DENND6A	Q8IWF6	608 aa		11.69	□□□□□ -0.54
APTX-233	ENST00000496030	SLC35F3	Q8IY50	421 aa		11.69	□□□□□ -0.54
APTX-233	ENST00000496030	ZBED8	Q8IZ13	594 aa		11.69	□□□□□ -0.54
APTX-233	ENST00000496030	GALNT15	Q8N3T1	639 aa		11.69	□□□□□ -0.54
APTX-233	ENST00000496030	FAM46D	Q8NEK8	389 aa		11.69	□□□□□ -0.54
APTX-233	ENST00000496030	GPR156	Q8NFN8	814 aa		11.69	□□□□□ -0.54
APTX-233	ENST00000496030	LPGAT1	Q92604	370 aa		11.69	□□□□□ -0.54
APTX-233	ENST00000496030	CFAP36	Q96G28	342 aa		11.69	□□□□□ -0.54
APTX-233	ENST00000496030	DCUN1D1	Q96GG9	259 aa		11.69	□□□□□ -0.54
APTX-233	ENST00000496030	ZNF514	Q96K75	400 aa	Predicted RBP	11.69	□□□□□ -0.54
APTX-233	ENST00000496030	APOLD1	Q96LR9	279 aa		11.69	□□□□□ -0.54
APTX-233	ENST00000496030	TTC25	Q96NG3	672 aa		11.69	□□□□□ -0.54
APTX-233	ENST00000496030	BIRC8	Q96P09	236 aa		11.69	□□□□□ -0.54
APTX-233	ENST00000496030	TCF12	Q99081	682 aa		11.69	□□□□□ -0.54
APTX-233	ENST00000496030	RHOXF2	Q9BQY4	288 aa		11.69	□□□□□ -0.54
APTX-233	ENST00000496030	ZCCHC2	Q9C0B9	1178 aa	Known RBP	11.69	□□□□□ -0.54
APTX-233	ENST00000496030	KLC4	Q9NSK0	619 aa		11.69	□□□□□ -0.54
APTX-233	ENST00000496030	C20orf96	Q9NUD7	363 aa	Predicted RBP	11.69	□□□□□ -0.54
APTX-233	ENST00000496030	MOCS1	Q9NZB8	636 aa		11.69	□□□□□ -0.54
APTX-233	ENST00000496030	KCNK6	Q9Y257	313 aa		11.69	□□□□□ -0.54
APTX-233	ENST00000496030	MGAT4D	A6NG13	374 aa		11.68	□□□□□ -0.54
APTX-233	ENST00000496030	CFAP99	D6REC4	459 aa		11.68	□□□□□ -0.54
APTX-233	ENST00000496030	AP2A2	O94973	939 aa		11.68	□□□□□ -0.54
APTX-233	ENST00000496030	RALB	P11234	206 aa		11.68	□□□□□ -0.54
APTX-233	ENST00000496030	BRAF	P15056	766 aa		11.68	□□□□□ -0.54
APTX-233	ENST00000496030	OGN	P20774	298 aa	Known RBP	11.68	□□□□□ -0.54
APTX-233	ENST00000496030	ACTR1B	P42025	376 aa		11.68	□□□□□ -0.54
APTX-233	ENST00000496030	MAGEA4	P43358	317 aa		11.68	□□□□□ -0.54
APTX-233	ENST00000496030	TTPA	P49638	278 aa		11.68	□□□□□ -0.54
APTX-233	ENST00000496030	CLDN6	P56747	220 aa		11.68	□□□□□ -0.54
APTX-233	ENST00000496030	ACTR1A	P61163	376 aa		11.68	□□□□□ -0.54
APTX-233	ENST00000496030	CTBP1	Q13363	440 aa		11.68	□□□□□ -0.54
APTX-233	ENST00000496030	GTF2H3	Q13889	308 aa		11.68	□□□□□ -0.54
APTX-233	ENST00000496030	PLA2G4E	Q3MJ16	856 aa		11.68	□□□□□ -0.54
APTX-233	ENST00000496030	CCDC157	Q569K6	752 aa		11.68	□□□□□ -0.54
APTX-233	ENST00000496030	AARS2	Q5JTZ9	985 aa	Known RBP	11.68	□□□□□ -0.54
APTX-233	ENST00000496030	UBAP2	Q5T6F2	1119 aa	Known RBP	11.68	□□□□□ -0.54
APTX-233	ENST00000496030	TEDDM1	Q5T9Z0	273 aa		11.68	□□□□□ -0.54
APTX-233	ENST00000496030	METRNL	Q641Q3	311 aa		11.68	□□□□□ -0.54
APTX-233	ENST00000496030	MRNIP	Q6NTE8	343 aa		11.68	□□□□□ -0.54
APTX-233	ENST00000496030	ZCCHC8	Q6NZY4	707 aa	Known RBP	11.68	□□□□□ -0.54
APTX-233	ENST00000496030	AMZ2	Q86W34	360 aa		11.68	□□□□□ -0.54
APTX-233	ENST00000496030	KCNMB4	Q86W47	210 aa		11.68	□□□□□ -0.54
APTX-233	ENST00000496030	CNTN4	Q8IWV2	1026 aa		11.68	□□□□□ -0.54
APTX-233	ENST00000496030	NAGS	Q8N159	534 aa		11.68	□□□□□ -0.54
APTX-233	ENST00000496030	OR2L2	Q8NH16	312 aa		11.68	□□□□□ -0.54
APTX-233	ENST00000496030	PYROXD1	Q8WU10	500 aa		11.68	□□□□□ -0.54
APTX-233	ENST00000496030	PATE1	Q8WXA2	126 aa		11.68	□□□□□ -0.54
APTX-233	ENST00000496030	IFT81	Q8WYA0	676 aa		11.68	□□□□□ -0.54
APTX-233	ENST00000496030	TBRG4	Q969Z0	631 aa	Known RBP eCLIP	11.68	□□□□□ -0.54
APTX-233	ENST00000496030	CERS2	Q96G23	380 aa		11.68	□□□□□ -0.54
APTX-233	ENST00000496030	DUSP23	Q9BVJ7	150 aa		11.68	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms