RNA–Protein interactions for RNA: ENST00000495630.1

TMEM53-209, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-209ENST00000495630 A1L4Q6 167 aa17.13■□□□□ 0.33
TMEM53-209ENST00000495630 TMEM63AO94886 807 aa17.13■□□□□ 0.33
TMEM53-209ENST00000495630 MTHFD1P11586 935 aaKnown RBP17.13■□□□□ 0.33
TMEM53-209ENST00000495630 MRPL49Q13405 166 aaKnown RBP17.13■□□□□ 0.33
TMEM53-209ENST00000495630 GPR19Q15760 415 aa17.13■□□□□ 0.33
TMEM53-209ENST00000495630 ANO6Q4KMQ2 910 aa17.13■□□□□ 0.33
TMEM53-209ENST00000495630 ARMC6Q6NXE6 501 aa17.13■□□□□ 0.33
TMEM53-209ENST00000495630 TMEM220Q6QAJ8 160 aa17.13■□□□□ 0.33
TMEM53-209ENST00000495630 OOSP2Q86WS3 158 aa17.13■□□□□ 0.33
TMEM53-209ENST00000495630 SPATA22Q8NHS9 363 aa17.13■□□□□ 0.33
TMEM53-209ENST00000495630 CPT1BQ92523 772 aa17.13■□□□□ 0.33
TMEM53-209ENST00000495630 MAK16Q9BXY0 300 aaKnown RBP17.13■□□□□ 0.33
TMEM53-209ENST00000495630 GLOD4Q9HC38 313 aa17.13■□□□□ 0.33
TMEM53-209ENST00000495630 CTTNBP2NLQ9P2B4 639 aa17.13■□□□□ 0.33
TMEM53-209ENST00000495630 TCFL5Q9UL49 500 aa17.13■□□□□ 0.33
TMEM53-209ENST00000495630 SNX7Q9UNH6 387 aa17.13■□□□□ 0.33
TMEM53-209ENST00000495630 ZNF106Q9H2Y7 1883 aaKnown RBP17.13■□□□□ 0.33
TMEM53-209ENST00000495630 TNRC6AQ8NDV7 1962 aaKnown RBP17.13■□□□□ 0.33
TMEM53-209ENST00000495630 CACNA1DQ01668 2161 aa17.12■□□□□ 0.33
TMEM53-209ENST00000495630 MED13Q9UHV7 2174 aa17.12■□□□□ 0.33
TMEM53-209ENST00000495630 ITPR2Q14571 2701 aa17.12■□□□□ 0.33
TMEM53-209ENST00000495630 ZNF185O15231 689 aa17.12■□□□□ 0.33
TMEM53-209ENST00000495630 MT-CYBP00156 380 aaPredicted RBP17.12■□□□□ 0.33
TMEM53-209ENST00000495630 VAV2P52735 878 aa17.12■□□□□ 0.33
TMEM53-209ENST00000495630 TEX44Q53QW1 395 aa17.12■□□□□ 0.33
TMEM53-209ENST00000495630 FAM182AQ5T1J6 154 aa17.12■□□□□ 0.33
TMEM53-209ENST00000495630 SLC6A19Q695T7 634 aa17.12■□□□□ 0.33
TMEM53-209ENST00000495630 SLC9A4Q6AI14 798 aa17.12■□□□□ 0.33
TMEM53-209ENST00000495630 FAM83HQ6ZRV2 1179 aaPredicted RBP17.12■□□□□ 0.33
TMEM53-209ENST00000495630 VSIG1Q86XK7 387 aa17.12■□□□□ 0.33
TMEM53-209ENST00000495630 DSELQ8IZU8 1212 aa17.12■□□□□ 0.33
TMEM53-209ENST00000495630 RBMXL3Q8N7X1 1067 aaKnown RBP17.12■□□□□ 0.33
TMEM53-209ENST00000495630 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.12■□□□□ 0.33
TMEM53-209ENST00000495630 SMAD5Q99717 465 aaKnown RBP17.12■□□□□ 0.33
TMEM53-209ENST00000495630 NUDT9Q9BW91 350 aa17.12■□□□□ 0.33
TMEM53-209ENST00000495630 MFRPQ9BY79 579 aa17.12■□□□□ 0.33
TMEM53-209ENST00000495630 SYTL2Q9HCH5 934 aa17.12■□□□□ 0.33
TMEM53-209ENST00000495630 IMP3Q9NV31 184 aaKnown RBP17.12■□□□□ 0.33
TMEM53-209ENST00000495630 BTRCQ9Y297 605 aa17.12■□□□□ 0.33
TMEM53-209ENST00000495630 SHANK1Q9Y566 2161 aa17.12■□□□□ 0.33
TMEM53-209ENST00000495630 LOC285095A0A1B0GVY8 99 aa17.11■□□□□ 0.33
TMEM53-209ENST00000495630 KLHL33A6NCF5 533 aa17.11■□□□□ 0.33
TMEM53-209ENST00000495630 OR6C74A6NCV1 312 aa17.11■□□□□ 0.33
TMEM53-209ENST00000495630 PPP1R12AO14974 1030 aaPredicted RBP17.11■□□□□ 0.33
TMEM53-209ENST00000495630 UGT1A9O60656 530 aa17.11■□□□□ 0.33
TMEM53-209ENST00000495630 PMPCBO75439 489 aa17.11■□□□□ 0.33
TMEM53-209ENST00000495630 SERPINC1P01008 464 aa17.11■□□□□ 0.33
TMEM53-209ENST00000495630 EPOP01588 193 aa17.11■□□□□ 0.33
TMEM53-209ENST00000495630 H2AFZP0C0S5 128 aa17.11■□□□□ 0.33
TMEM53-209ENST00000495630 ZFXP17010 805 aaPredicted RBP17.11■□□□□ 0.33
TMEM53-209ENST00000495630 UGT1A6P19224 532 aa17.11■□□□□ 0.33
TMEM53-209ENST00000495630 UGT1A1P22309 533 aa17.11■□□□□ 0.33
TMEM53-209ENST00000495630 UGT1A4P22310 534 aa17.11■□□□□ 0.33
TMEM53-209ENST00000495630 CTSCP53634 463 aa17.11■□□□□ 0.33
TMEM53-209ENST00000495630 RRADP55042 308 aa17.11■□□□□ 0.33
TMEM53-209ENST00000495630 ZBED6P86452 979 aa17.11■□□□□ 0.33
TMEM53-209ENST00000495630 XRCC4Q13426 336 aa17.11■□□□□ 0.33
TMEM53-209ENST00000495630 NFE2L1Q14494 772 aa17.11■□□□□ 0.33
TMEM53-209ENST00000495630 PRR30Q53SZ7 412 aaPredicted RBP17.11■□□□□ 0.33
TMEM53-209ENST00000495630 LCN10Q6JVE6 187 aa17.11■□□□□ 0.33
TMEM53-209ENST00000495630 H2AFVQ71UI9 128 aa17.11■□□□□ 0.33
TMEM53-209ENST00000495630 ENDOVQ8N8Q3 282 aaKnown RBP17.11■□□□□ 0.33
TMEM53-209ENST00000495630 DDHD1Q8NEL9 900 aa17.11■□□□□ 0.33
TMEM53-209ENST00000495630 OLFM3Q96PB7 478 aa17.11■□□□□ 0.33
TMEM53-209ENST00000495630 GBP4Q96PP9 640 aa17.11■□□□□ 0.33
TMEM53-209ENST00000495630 INSM2Q96T92 566 aaPredicted RBP17.11■□□□□ 0.33
TMEM53-209ENST00000495630 UGT1A7Q9HAW7 530 aa17.11■□□□□ 0.33
TMEM53-209ENST00000495630 UGT1A10Q9HAW8 530 aa17.11■□□□□ 0.33
TMEM53-209ENST00000495630 UGT1A8Q9HAW9 530 aa17.11■□□□□ 0.33
TMEM53-209ENST00000495630 GPR83Q9NYM4 423 aa17.11■□□□□ 0.33
TMEM53-209ENST00000495630 IL17CQ9P0M4 197 aa17.11■□□□□ 0.33
TMEM53-209ENST00000495630 TMEM63CQ9P1W3 806 aa17.11■□□□□ 0.33
TMEM53-209ENST00000495630 C5AR2Q9P296 337 aa17.11■□□□□ 0.33
TMEM53-209ENST00000495630 MAP10Q9P2G4 905 aa17.11■□□□□ 0.33
TMEM53-209ENST00000495630 SLC24A2Q9UI40 661 aa17.11■□□□□ 0.33
TMEM53-209ENST00000495630 ACSL5Q9ULC5 683 aa17.11■□□□□ 0.33
TMEM53-209ENST00000495630 CAPN11Q9UMQ6 739 aa17.11■□□□□ 0.33
TMEM53-209ENST00000495630 PRRC2CQ9Y520 2896 aaKnown RBP17.11■□□□□ 0.33
TMEM53-209ENST00000495630 A0A0A6YYK5 440 aaPredicted RBP17.1■□□□□ 0.33
TMEM53-209ENST00000495630 LRRD1A4D1F6 860 aa17.1■□□□□ 0.33
TMEM53-209ENST00000495630 A6NL46 340 aa17.1■□□□□ 0.33
TMEM53-209ENST00000495630 APOL1O14791 398 aa17.1■□□□□ 0.33
TMEM53-209ENST00000495630 CBX6O95503 412 aa17.1■□□□□ 0.33
TMEM53-209ENST00000495630 RORAP35398 523 aa17.1■□□□□ 0.33
TMEM53-209ENST00000495630 SPAM1P38567 509 aa17.1■□□□□ 0.33
TMEM53-209ENST00000495630 KPNA2P52292 529 aaKnown RBP17.1■□□□□ 0.33
TMEM53-209ENST00000495630 ITGA1P56199 1179 aa17.1■□□□□ 0.33
TMEM53-209ENST00000495630 PPP2R5EQ16537 467 aa17.1■□□□□ 0.33
TMEM53-209ENST00000495630 LONRF2Q1L5Z9 754 aa17.1■□□□□ 0.33
TMEM53-209ENST00000495630 ZNF787Q6DD87 383 aa17.1■□□□□ 0.33
TMEM53-209ENST00000495630 TTC30BQ8N4P2 665 aa17.1■□□□□ 0.33
TMEM53-209ENST00000495630 ZBTB2Q8N680 514 aa17.1■□□□□ 0.33
TMEM53-209ENST00000495630 CLIP3Q96DZ5 547 aa17.1■□□□□ 0.33
TMEM53-209ENST00000495630 TEKT5Q96M29 485 aa17.1■□□□□ 0.33
TMEM53-209ENST00000495630 KIR3DX1Q9H7L2 352 aa17.1■□□□□ 0.33
TMEM53-209ENST00000495630 FANCEQ9HB96 536 aa17.1■□□□□ 0.33
TMEM53-209ENST00000495630 C1GALT1Q9NS00 363 aa17.1■□□□□ 0.33
TMEM53-209ENST00000495630 SOHLH2Q9NX45 425 aa17.1■□□□□ 0.33
TMEM53-209ENST00000495630 HACD3Q9P035 362 aa17.1■□□□□ 0.33
TMEM53-209ENST00000495630 LUZP4Q9P127 313 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms