RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 NUDT4Q9NZJ9 180 aa10.12□□□□□ -0.79
HDAC3-214ENST00000495485 CD274Q9NZQ7 290 aa10.12□□□□□ -0.79
HDAC3-214ENST00000495485 LNPEPQ9UIQ6 1025 aa10.12□□□□□ -0.79
HDAC3-214ENST00000495485 CDYLQ9Y232 598 aa10.12□□□□□ -0.79
HDAC3-214ENST00000495485 MUC22E2RYF6 1773 aaPredicted RBP10.11□□□□□ -0.79
HDAC3-214ENST00000495485 ZFHX2Q9C0A1 2572 aaPredicted RBP10.11□□□□□ -0.79
HDAC3-214ENST00000495485 MATN2O00339 956 aa10.11□□□□□ -0.79
HDAC3-214ENST00000495485 TRIM24O15164 1050 aa10.11□□□□□ -0.79
HDAC3-214ENST00000495485 NIPSNAP2O75323 286 aa10.11□□□□□ -0.79
HDAC3-214ENST00000495485 VPS4BO75351 444 aa10.11□□□□□ -0.79
HDAC3-214ENST00000495485 CRCPO75575 148 aa10.11□□□□□ -0.79
HDAC3-214ENST00000495485 KLF8O95600 359 aaPredicted RBP10.11□□□□□ -0.79
HDAC3-214ENST00000495485 EPHX1P07099 455 aa10.11□□□□□ -0.79
HDAC3-214ENST00000495485 C1SP09871 688 aa10.11□□□□□ -0.79
HDAC3-214ENST00000495485 PRSS56P0CW18 603 aa10.11□□□□□ -0.79
HDAC3-214ENST00000495485 UGT1A6P19224 532 aa10.11□□□□□ -0.79
HDAC3-214ENST00000495485 UGT1A1P22309 533 aa10.11□□□□□ -0.79
HDAC3-214ENST00000495485 UGT1A4P22310 534 aa10.11□□□□□ -0.79
HDAC3-214ENST00000495485 PTPN4P29074 926 aa10.11□□□□□ -0.79
HDAC3-214ENST00000495485 UGT1A3P35503 534 aa10.11□□□□□ -0.79
HDAC3-214ENST00000495485 UGT1A5P35504 534 aa10.11□□□□□ -0.79
HDAC3-214ENST00000495485 LIG3P49916 1009 aa10.11□□□□□ -0.79
HDAC3-214ENST00000495485 IDH3AP50213 366 aa10.11□□□□□ -0.79
HDAC3-214ENST00000495485 CLCN7P51798 805 aa10.11□□□□□ -0.79
HDAC3-214ENST00000495485 CDC16Q13042 620 aa10.11□□□□□ -0.79
HDAC3-214ENST00000495485 CAMK2GQ13555 558 aaPredicted RBP10.11□□□□□ -0.79
HDAC3-214ENST00000495485 GAS6Q14393 721 aa10.11□□□□□ -0.79
HDAC3-214ENST00000495485 ANGPT1Q15389 498 aa10.11□□□□□ -0.79
HDAC3-214ENST00000495485 SETMARQ53H47 684 aaPredicted RBP10.11□□□□□ -0.79
HDAC3-214ENST00000495485 SH2D4BQ5SQS7 431 aa10.11□□□□□ -0.79
HDAC3-214ENST00000495485 PLEKHS1Q5SXH7 462 aa10.11□□□□□ -0.79
HDAC3-214ENST00000495485 C9orf64Q5T6V5 341 aa10.11□□□□□ -0.79
HDAC3-214ENST00000495485 EGFLAMQ63HQ2 1017 aa10.11□□□□□ -0.79
HDAC3-214ENST00000495485 NAPRTQ6XQN6 538 aa10.11□□□□□ -0.79
HDAC3-214ENST00000495485 LIPIQ6XZB0 460 aa10.11□□□□□ -0.79
HDAC3-214ENST00000495485 Q6ZS52 159 aa10.11□□□□□ -0.79
HDAC3-214ENST00000495485 CYP2U1Q7Z449 544 aa10.11□□□□□ -0.79
HDAC3-214ENST00000495485 WDR5BQ86VZ2 330 aa10.11□□□□□ -0.79
HDAC3-214ENST00000495485 NLRP8Q86W28 1048 aa10.11□□□□□ -0.79
HDAC3-214ENST00000495485 LONP2Q86WA8 852 aa10.11□□□□□ -0.79
HDAC3-214ENST00000495485 CLYBLQ8N0X4 340 aa10.11□□□□□ -0.79
HDAC3-214ENST00000495485 ZNF781Q8N8C0 355 aa10.11□□□□□ -0.79
HDAC3-214ENST00000495485 SIDT2Q8NBJ9 832 aaKnown RBP10.11□□□□□ -0.79
HDAC3-214ENST00000495485 CEP70Q8NHQ1 597 aa10.11□□□□□ -0.79
HDAC3-214ENST00000495485 CXorf40AQ8TE69 158 aa10.11□□□□□ -0.79
HDAC3-214ENST00000495485 EEF1AKMT1Q8WVE0 214 aa10.11□□□□□ -0.79
HDAC3-214ENST00000495485 CMTM5Q96DZ9 223 aa10.11□□□□□ -0.79
HDAC3-214ENST00000495485 TMEM237Q96Q45 408 aa10.11□□□□□ -0.79
HDAC3-214ENST00000495485 SMIM14Q96QK8 99 aa10.11□□□□□ -0.79
HDAC3-214ENST00000495485 ATOH8Q96SQ7 321 aa10.11□□□□□ -0.79
HDAC3-214ENST00000495485 CCT7Q99832 543 aa10.11□□□□□ -0.79
HDAC3-214ENST00000495485 C20orf27Q9GZN8 174 aa10.11□□□□□ -0.79
HDAC3-214ENST00000495485 TCF7L2Q9NQB0 619 aa10.11□□□□□ -0.79
HDAC3-214ENST00000495485 PPM1HQ9ULR3 514 aa10.11□□□□□ -0.79
HDAC3-214ENST00000495485 STON1Q9Y6Q2 735 aa10.11□□□□□ -0.79
HDAC3-214ENST00000495485 DMDP11532 3685 aa10.11□□□□□ -0.79
HDAC3-214ENST00000495485 KNL1Q8NG31 2342 aa10.11□□□□□ -0.79
HDAC3-214ENST00000495485 GVINP1Q7Z2Y8 2422 aa10.1□□□□□ -0.79
HDAC3-214ENST00000495485 IGLV3-16A0A075B6K0 115 aa10.1□□□□□ -0.79
HDAC3-214ENST00000495485 K7ESF4 209 aa10.1□□□□□ -0.79
HDAC3-214ENST00000495485 GAPDHSO14556 408 aaPredicted RBP10.1□□□□□ -0.79
HDAC3-214ENST00000495485 HGSO14964 777 aaPredicted RBP10.1□□□□□ -0.79
HDAC3-214ENST00000495485 SLC16A5O15375 505 aa10.1□□□□□ -0.79
HDAC3-214ENST00000495485 KLK8O60259 260 aa10.1□□□□□ -0.79
HDAC3-214ENST00000495485 LZTS3O60299 673 aaPredicted RBP10.1□□□□□ -0.79
HDAC3-214ENST00000495485 GPC4O75487 556 aa10.1□□□□□ -0.79
HDAC3-214ENST00000495485 ADH1BP00325 375 aa10.1□□□□□ -0.79
HDAC3-214ENST00000495485 C8GP07360 202 aa10.1□□□□□ -0.79
HDAC3-214ENST00000495485 CTSLP07711 333 aa10.1□□□□□ -0.79
HDAC3-214ENST00000495485 ENO2P09104 434 aaPredicted RBP10.1□□□□□ -0.79
HDAC3-214ENST00000495485 HIST1H2AGP0C0S8 130 aaPredicted RBP10.1□□□□□ -0.79
HDAC3-214ENST00000495485 MPC1LP0DKB6 136 aa10.1□□□□□ -0.79
HDAC3-214ENST00000495485 TDGF1P13385 188 aa10.1□□□□□ -0.79
HDAC3-214ENST00000495485 VCLP18206 1134 aa10.1□□□□□ -0.79
HDAC3-214ENST00000495485 NCF2P19878 526 aaPredicted RBP10.1□□□□□ -0.79
HDAC3-214ENST00000495485 HIST1H2ADP20671 130 aa10.1□□□□□ -0.79
HDAC3-214ENST00000495485 LHCGRP22888 699 aa10.1□□□□□ -0.79
HDAC3-214ENST00000495485 PRDX6P30041 224 aa10.1□□□□□ -0.79
HDAC3-214ENST00000495485 GMPRP36959 345 aa10.1□□□□□ -0.79
HDAC3-214ENST00000495485 MMP12P39900 470 aa10.1□□□□□ -0.79
HDAC3-214ENST00000495485 DPP6P42658 865 aa10.1□□□□□ -0.79
HDAC3-214ENST00000495485 PIK3CGP48736 1102 aa10.1□□□□□ -0.79
HDAC3-214ENST00000495485 SEC13P55735 322 aa10.1□□□□□ -0.79
HDAC3-214ENST00000495485 TIAL1Q01085 375 aaKnown RBP eCLIP10.1□□□□□ -0.79
HDAC3-214ENST00000495485 PLOD1Q02809 727 aaPredicted RBP10.1□□□□□ -0.79
HDAC3-214ENST00000495485 GTF2H3Q13889 308 aa10.1□□□□□ -0.79
HDAC3-214ENST00000495485 PTPRRQ15256 657 aa10.1□□□□□ -0.79
HDAC3-214ENST00000495485 TSNQ15631 228 aaKnown RBP10.1□□□□□ -0.79
HDAC3-214ENST00000495485 PFKFB4Q16877 469 aa10.1□□□□□ -0.79
HDAC3-214ENST00000495485 TMEM52BQ4KMG9 183 aa10.1□□□□□ -0.79
HDAC3-214ENST00000495485 ATP13A5Q4VNC0 1218 aa10.1□□□□□ -0.79
HDAC3-214ENST00000495485 NAIF1Q69YI7 327 aaPredicted RBP10.1□□□□□ -0.79
HDAC3-214ENST00000495485 SULT1C3Q6IMI6 304 aa10.1□□□□□ -0.79
HDAC3-214ENST00000495485 NEK10Q6ZWH5 1172 aa10.1□□□□□ -0.79
HDAC3-214ENST00000495485 ERN2Q76MJ5 926 aaKnown RBP10.1□□□□□ -0.79
HDAC3-214ENST00000495485 CUZD1Q86UP6 607 aa10.1□□□□□ -0.79
HDAC3-214ENST00000495485 KBTBD6Q86V97 674 aa10.1□□□□□ -0.79
HDAC3-214ENST00000495485 PHYKPLQ8IUZ5 450 aa10.1□□□□□ -0.79
HDAC3-214ENST00000495485 CPNE9Q8IYJ1 553 aa10.1□□□□□ -0.79
HDAC3-214ENST00000495485 TCAIMQ8N3R3 496 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms