RNA–Protein interactions for RNA: ENST00000493669.2

PHACTR4-204, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 3,078 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-204ENST00000493669 GBX1Q14549 363 aa10.63□□□□□ -0.71
PHACTR4-204ENST00000493669 ATP13A5Q4VNC0 1218 aa10.63□□□□□ -0.71
PHACTR4-204ENST00000493669 PDCD4Q53EL6 469 aaKnown RBP10.63□□□□□ -0.71
PHACTR4-204ENST00000493669 SAMD4BQ5PRF9 694 aaKnown RBP10.63□□□□□ -0.71
PHACTR4-204ENST00000493669 RAVER1Q8IY67 606 aaKnown RBP10.63□□□□□ -0.71
PHACTR4-204ENST00000493669 NOL11Q9H8H0 719 aaKnown RBP10.63□□□□□ -0.71
PHACTR4-204ENST00000493669 DOCK6Q96HP0 2047 aa10.63□□□□□ -0.71
PHACTR4-204ENST00000493669 UPK3BL1B0FP48 263 aa10.62□□□□□ -0.71
PHACTR4-204ENST00000493669 UPK3BL2E5RIL1 263 aa10.62□□□□□ -0.71
PHACTR4-204ENST00000493669 H3BNX3 289 aa10.62□□□□□ -0.71
PHACTR4-204ENST00000493669 ACOT8O14734 319 aa10.62□□□□□ -0.71
PHACTR4-204ENST00000493669 KPNA5O15131 536 aa10.62□□□□□ -0.71
PHACTR4-204ENST00000493669 PEX1O43933 1283 aa10.62□□□□□ -0.71
PHACTR4-204ENST00000493669 AP2A2O94973 939 aa10.62□□□□□ -0.71
PHACTR4-204ENST00000493669 OR4F21O95013 312 aa10.62□□□□□ -0.71
PHACTR4-204ENST00000493669 CSPG5O95196 566 aa10.62□□□□□ -0.71
PHACTR4-204ENST00000493669 PRDX3P30048 256 aaKnown RBP10.62□□□□□ -0.71
PHACTR4-204ENST00000493669 TMEM215Q68D42 235 aa10.62□□□□□ -0.71
PHACTR4-204ENST00000493669 EFCAB3Q8N7B9 438 aa10.62□□□□□ -0.71
PHACTR4-204ENST00000493669 TIFAQ96CG3 184 aa10.62□□□□□ -0.71
PHACTR4-204ENST00000493669 ZSWIM3Q96MP5 696 aa10.62□□□□□ -0.71
PHACTR4-204ENST00000493669 ADA2Q9NZK5 511 aa10.62□□□□□ -0.71
PHACTR4-204ENST00000493669 ZIM2Q9NZV7 527 aa10.62□□□□□ -0.71
PHACTR4-204ENST00000493669 TMEM181Q9P2C4 612 aa10.62□□□□□ -0.71
PHACTR4-204ENST00000493669 PCDH10Q9P2E7 1040 aa10.62□□□□□ -0.71
PHACTR4-204ENST00000493669 SLC27A6Q9Y2P4 619 aa10.62□□□□□ -0.71
PHACTR4-204ENST00000493669 ASB1Q9Y576 335 aa10.62□□□□□ -0.71
PHACTR4-204ENST00000493669 TIMM22Q9Y584 194 aa10.62□□□□□ -0.71
PHACTR4-204ENST00000493669 PTGDR2Q9Y5Y4 395 aa10.62□□□□□ -0.71
PHACTR4-204ENST00000493669 PLXNB3Q9ULL4 1909 aa10.62□□□□□ -0.71
PHACTR4-204ENST00000493669 DYTNA2CJ06 578 aa10.62□□□□□ -0.71
PHACTR4-204ENST00000493669 A8MX80 341 aa10.62□□□□□ -0.71
PHACTR4-204ENST00000493669 CFAP99D6REC4 459 aa10.62□□□□□ -0.71
PHACTR4-204ENST00000493669 QSOX1O00391 747 aa10.62□□□□□ -0.71
PHACTR4-204ENST00000493669 ADH1CP00326 375 aa10.62□□□□□ -0.71
PHACTR4-204ENST00000493669 MPC1LP0DKB6 136 aa10.62□□□□□ -0.71
PHACTR4-204ENST00000493669 ITGB6P18564 788 aa10.62□□□□□ -0.71
PHACTR4-204ENST00000493669 ERVPABLB-1P60509 514 aa10.62□□□□□ -0.71
PHACTR4-204ENST00000493669 TRIM25Q14258 630 aaKnown RBP10.62□□□□□ -0.71
PHACTR4-204ENST00000493669 DHCR24Q15392 516 aa10.62□□□□□ -0.71
PHACTR4-204ENST00000493669 SMU1Q2TAY7 513 aa10.62□□□□□ -0.71
PHACTR4-204ENST00000493669 TCAIMQ8N3R3 496 aa10.62□□□□□ -0.71
PHACTR4-204ENST00000493669 OR9I1Q8NGQ6 314 aa10.62□□□□□ -0.71
PHACTR4-204ENST00000493669 N4BP2L2Q92802 583 aaPredicted RBP10.62□□□□□ -0.71
PHACTR4-204ENST00000493669 RHBDF1Q96CC6 855 aa10.62□□□□□ -0.71
PHACTR4-204ENST00000493669 CD244Q9BZW8 370 aa10.62□□□□□ -0.71
PHACTR4-204ENST00000493669 GID8Q9NWU2 228 aa10.62□□□□□ -0.71
PHACTR4-204ENST00000493669 GRXCR2A6NFK2 248 aa10.61□□□□□ -0.71
PHACTR4-204ENST00000493669 E7ENX8 843 aa10.61□□□□□ -0.71
PHACTR4-204ENST00000493669 OR7A17O14581 309 aa10.61□□□□□ -0.71
PHACTR4-204ENST00000493669 ANGPT2O15123 496 aa10.61□□□□□ -0.71
PHACTR4-204ENST00000493669 SLC16A5O15375 505 aa10.61□□□□□ -0.71
PHACTR4-204ENST00000493669 NUAK1O60285 661 aa10.61□□□□□ -0.71
PHACTR4-204ENST00000493669 WDR47O94967 919 aa10.61□□□□□ -0.71
PHACTR4-204ENST00000493669 C8GP07360 202 aa10.61□□□□□ -0.71
PHACTR4-204ENST00000493669 ADH5P11766 374 aa10.61□□□□□ -0.71
PHACTR4-204ENST00000493669 DGKGP49619 791 aa10.61□□□□□ -0.71
PHACTR4-204ENST00000493669 B4GALNT1Q00973 533 aa10.61□□□□□ -0.71
PHACTR4-204ENST00000493669 TRAF3Q13114 568 aa10.61□□□□□ -0.71
PHACTR4-204ENST00000493669 SP140Q13342 867 aa10.61□□□□□ -0.71
PHACTR4-204ENST00000493669 FBXO48Q5FWF7 155 aa10.61□□□□□ -0.71
PHACTR4-204ENST00000493669 PLEKHS1Q5SXH7 462 aa10.61□□□□□ -0.71
PHACTR4-204ENST00000493669 IRGCQ6NXR0 463 aa10.61□□□□□ -0.71
PHACTR4-204ENST00000493669 LETMD1Q6P1Q0 360 aa10.61□□□□□ -0.71
PHACTR4-204ENST00000493669 BLOC1S3Q6QNY0 202 aa10.61□□□□□ -0.71
PHACTR4-204ENST00000493669 MINDY1Q8N5J2 469 aa10.61□□□□□ -0.71
PHACTR4-204ENST00000493669 CDYL2Q8N8U2 506 aa10.61□□□□□ -0.71
PHACTR4-204ENST00000493669 OR52B6Q8NGF0 335 aa10.61□□□□□ -0.71
PHACTR4-204ENST00000493669 METTL6Q8TCB7 284 aa10.61□□□□□ -0.71
PHACTR4-204ENST00000493669 OSCP1Q8WVF1 389 aa10.61□□□□□ -0.71
PHACTR4-204ENST00000493669 LBHD1Q9BQE6 289 aaPredicted RBP10.61□□□□□ -0.71
PHACTR4-204ENST00000493669 GPATCH1Q9BRR8 931 aaKnown RBP10.61□□□□□ -0.71
PHACTR4-204ENST00000493669 NSUN3Q9H649 340 aaKnown RBP10.61□□□□□ -0.71
PHACTR4-204ENST00000493669 WWOXQ9NZC7 414 aa10.61□□□□□ -0.71
PHACTR4-204ENST00000493669 OPTCQ9UBM4 332 aa10.61□□□□□ -0.71
PHACTR4-204ENST00000493669 CD300AQ9UGN4 299 aa10.61□□□□□ -0.71
PHACTR4-204ENST00000493669 IL36AQ9UHA7 158 aa10.61□□□□□ -0.71
PHACTR4-204ENST00000493669 MYOFQ9NZM1 2061 aa10.61□□□□□ -0.71
PHACTR4-204ENST00000493669 NR5A2O00482 541 aa10.61□□□□□ -0.71
PHACTR4-204ENST00000493669 TAPBPO15533 448 aa10.61□□□□□ -0.71
PHACTR4-204ENST00000493669 CYP17A1P05093 508 aa10.61□□□□□ -0.71
PHACTR4-204ENST00000493669 CISD3P0C7P0 127 aa10.61□□□□□ -0.71
PHACTR4-204ENST00000493669 AOAHP28039 575 aa10.61□□□□□ -0.71
PHACTR4-204ENST00000493669 ATP6AP1LQ52LC2 224 aa10.61□□□□□ -0.71
PHACTR4-204ENST00000493669 ZNF805Q5CZA5 627 aa10.61□□□□□ -0.71
PHACTR4-204ENST00000493669 NEK10Q6ZWH5 1172 aa10.61□□□□□ -0.71
PHACTR4-204ENST00000493669 DPPA4Q7L190 304 aa10.61□□□□□ -0.71
PHACTR4-204ENST00000493669 TRAM1L1Q8N609 369 aa10.61□□□□□ -0.71
PHACTR4-204ENST00000493669 GDPD5Q8WTR4 605 aa10.61□□□□□ -0.71
PHACTR4-204ENST00000493669 DCUN1D1Q96GG9 259 aa10.61□□□□□ -0.71
PHACTR4-204ENST00000493669 EGFL8Q99944 293 aa10.61□□□□□ -0.71
PHACTR4-204ENST00000493669 ECSITQ9BQ95 431 aa10.61□□□□□ -0.71
PHACTR4-204ENST00000493669 FAM83DQ9H4H8 585 aa10.61□□□□□ -0.71
PHACTR4-204ENST00000493669 IPPKQ9H8X2 491 aa10.61□□□□□ -0.71
PHACTR4-204ENST00000493669 HEBP1Q9NRV9 189 aa10.61□□□□□ -0.71
PHACTR4-204ENST00000493669 DUS2Q9NX74 493 aaKnown RBP10.61□□□□□ -0.71
PHACTR4-204ENST00000493669 ABCD2Q9UBJ2 740 aa10.61□□□□□ -0.71
PHACTR4-204ENST00000493669 ADAMTS6Q9UKP5 1117 aa10.61□□□□□ -0.71
PHACTR4-204ENST00000493669 HCFC2Q9Y5Z7 792 aa10.61□□□□□ -0.71
PHACTR4-204ENST00000493669 K7EPI3 171 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms