RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 PFDN4Q9NQP4 134 aa2.92□□□□□ -1.94
UBXN4-208ENST00000490163 ANKFY1Q9P2R3 1169 aa2.92□□□□□ -1.94
UBXN4-208ENST00000490163 RAB21Q9UL25 225 aa2.92□□□□□ -1.94
UBXN4-208ENST00000490163 MAST3O60307 1309 aa2.92□□□□□ -1.94
UBXN4-208ENST00000490163 NPHP3Q7Z494 1330 aa2.92□□□□□ -1.94
UBXN4-208ENST00000490163 KIF16BQ96L93 1317 aa2.92□□□□□ -1.94
UBXN4-208ENST00000490163 ADGRL3Q9HAR2 1447 aa2.91□□□□□ -1.94
UBXN4-208ENST00000490163 VWC2LB2RUY7 222 aa2.91□□□□□ -1.94
UBXN4-208ENST00000490163 ASGR1P07306 291 aa2.91□□□□□ -1.94
UBXN4-208ENST00000490163 ABHD2P08910 425 aa2.91□□□□□ -1.94
UBXN4-208ENST00000490163 UGT1A1P22309 533 aa2.91□□□□□ -1.94
UBXN4-208ENST00000490163 RASSF2P50749 326 aa2.91□□□□□ -1.94
UBXN4-208ENST00000490163 MFAP4P55083 255 aa2.91□□□□□ -1.94
UBXN4-208ENST00000490163 DLK1P80370 383 aa2.91□□□□□ -1.94
UBXN4-208ENST00000490163 ELP6Q0PNE2 266 aa2.91□□□□□ -1.94
UBXN4-208ENST00000490163 FUT7Q11130 342 aa2.91□□□□□ -1.94
UBXN4-208ENST00000490163 PTK6Q13882 451 aa2.91□□□□□ -1.94
UBXN4-208ENST00000490163 PDK1Q15118 436 aa2.91□□□□□ -1.94
UBXN4-208ENST00000490163 DECR1Q16698 335 aa2.91□□□□□ -1.94
UBXN4-208ENST00000490163 ZNF792Q3KQV3 632 aa2.91□□□□□ -1.94
UBXN4-208ENST00000490163 TBC1D25Q3MII6 688 aa2.91□□□□□ -1.94
UBXN4-208ENST00000490163 GRTP1Q5TC63 336 aa2.91□□□□□ -1.94
UBXN4-208ENST00000490163 SFMBT2Q5VUG0 894 aa2.91□□□□□ -1.94
UBXN4-208ENST00000490163 AGAP6Q5VW22 663 aa2.91□□□□□ -1.94
UBXN4-208ENST00000490163 DENND2CQ68D51 928 aa2.91□□□□□ -1.94
UBXN4-208ENST00000490163 TMEM182Q6ZP80 229 aaPredicted RBP2.91□□□□□ -1.94
UBXN4-208ENST00000490163 OTUD6AQ7L8S5 288 aa2.91□□□□□ -1.94
UBXN4-208ENST00000490163 HAUS6Q7Z4H7 955 aa2.91□□□□□ -1.94
UBXN4-208ENST00000490163 C17orf53Q8N3J3 647 aaPredicted RBP2.91□□□□□ -1.94
UBXN4-208ENST00000490163 GOLGA5Q8TBA6 731 aa2.91□□□□□ -1.94
UBXN4-208ENST00000490163 GLG1Q92896 1179 aa2.91□□□□□ -1.94
UBXN4-208ENST00000490163 MIEF2Q96C03 454 aa2.91□□□□□ -1.94
UBXN4-208ENST00000490163 KIRREL1Q96J84 757 aa2.91□□□□□ -1.94
UBXN4-208ENST00000490163 CASD1Q96PB1 797 aa2.91□□□□□ -1.94
UBXN4-208ENST00000490163 INTS14Q96SY0 518 aa2.91□□□□□ -1.94
UBXN4-208ENST00000490163 RAB33BQ9H082 229 aa2.91□□□□□ -1.94
UBXN4-208ENST00000490163 ZMYND12Q9H0C1 365 aa2.91□□□□□ -1.94
UBXN4-208ENST00000490163 DUSP22Q9NRW4 184 aa2.91□□□□□ -1.94
UBXN4-208ENST00000490163 SOHLH2Q9NX45 425 aa2.91□□□□□ -1.94
UBXN4-208ENST00000490163 STK26Q9P289 416 aa2.91□□□□□ -1.94
UBXN4-208ENST00000490163 ANAPC5Q9UJX4 755 aa2.91□□□□□ -1.94
UBXN4-208ENST00000490163 CCPG1Q9ULG6 757 aa2.91□□□□□ -1.94
UBXN4-208ENST00000490163 RGPD5Q99666 1765 aa2.91□□□□□ -1.94
UBXN4-208ENST00000490163 CCDC7Q96M83 1385 aa2.91□□□□□ -1.94
UBXN4-208ENST00000490163 IBTKQ9P2D0 1353 aaPredicted RBP2.91□□□□□ -1.94
UBXN4-208ENST00000490163 CPSF1Q10570 1443 aaKnown RBP2.91□□□□□ -1.94
UBXN4-208ENST00000490163 QSER1Q2KHR3 1735 aa2.91□□□□□ -1.94
UBXN4-208ENST00000490163 UBR2Q8IWV8 1755 aa2.91□□□□□ -1.94
UBXN4-208ENST00000490163 A0A1B0GUL7 405 aa2.91□□□□□ -1.94
UBXN4-208ENST00000490163 SLC15A5A6NIM6 579 aa2.91□□□□□ -1.94
UBXN4-208ENST00000490163 H0YIN7 160 aa2.91□□□□□ -1.94
UBXN4-208ENST00000490163 ZNF185O15231 689 aa2.91□□□□□ -1.94
UBXN4-208ENST00000490163 PEX11AO75192 247 aa2.91□□□□□ -1.94
UBXN4-208ENST00000490163 ENO1P06733 434 aaKnown RBP2.91□□□□□ -1.94
UBXN4-208ENST00000490163 TSPY3P0CV98 308 aa2.91□□□□□ -1.94
UBXN4-208ENST00000490163 TSPY8P0CW00 308 aa2.91□□□□□ -1.94
UBXN4-208ENST00000490163 CTPS1P17812 591 aa2.91□□□□□ -1.94
UBXN4-208ENST00000490163 CFPP27918 469 aa2.91□□□□□ -1.94
UBXN4-208ENST00000490163 TYK2P29597 1187 aa2.91□□□□□ -1.94
UBXN4-208ENST00000490163 CORO1AP31146 461 aaKnown RBP2.91□□□□□ -1.94
UBXN4-208ENST00000490163 ATP6V1E1P36543 226 aa2.91□□□□□ -1.94
UBXN4-208ENST00000490163 RABIFP47224 123 aa2.91□□□□□ -1.94
UBXN4-208ENST00000490163 AGTR2P50052 363 aa2.91□□□□□ -1.94
UBXN4-208ENST00000490163 ACSM2AQ08AH3 577 aa2.91□□□□□ -1.94
UBXN4-208ENST00000490163 LRIF1Q5T3J3 769 aa2.91□□□□□ -1.94
UBXN4-208ENST00000490163 ACSM2BQ68CK6 577 aa2.91□□□□□ -1.94
UBXN4-208ENST00000490163 CLEC9AQ6UXN8 241 aa2.91□□□□□ -1.94
UBXN4-208ENST00000490163 INTS8Q75QN2 995 aaKnown RBP2.91□□□□□ -1.94
UBXN4-208ENST00000490163 PHLDB2Q86SQ0 1253 aa2.91□□□□□ -1.94
UBXN4-208ENST00000490163 VASH2Q86V25 355 aa2.91□□□□□ -1.94
UBXN4-208ENST00000490163 TMEM151BQ8IW70 566 aa2.91□□□□□ -1.94
UBXN4-208ENST00000490163 FBXL6Q8N531 539 aa2.91□□□□□ -1.94
UBXN4-208ENST00000490163 MB21D1Q8N884 522 aa2.91□□□□□ -1.94
UBXN4-208ENST00000490163 CPEB3Q8NE35 698 aaKnown RBP2.91□□□□□ -1.94
UBXN4-208ENST00000490163 OR56A1Q8NGH5 318 aa2.91□□□□□ -1.94
UBXN4-208ENST00000490163 OR5M3Q8NGP4 307 aa2.91□□□□□ -1.94
UBXN4-208ENST00000490163 OR2T34Q8NGX1 318 aa2.91□□□□□ -1.94
UBXN4-208ENST00000490163 ZNF347Q96SE7 839 aa2.91□□□□□ -1.94
UBXN4-208ENST00000490163 ACOX2Q99424 681 aa2.91□□□□□ -1.94
UBXN4-208ENST00000490163 RTN4RQ9BZR6 473 aa2.91□□□□□ -1.94
UBXN4-208ENST00000490163 CATSPERBQ9H7T0 1116 aa2.91□□□□□ -1.94
UBXN4-208ENST00000490163 STARD5Q9NSY2 213 aa2.91□□□□□ -1.94
UBXN4-208ENST00000490163 COX16Q9P0S2 106 aa2.91□□□□□ -1.94
UBXN4-208ENST00000490163 CARD8Q9Y2G2 431 aa2.91□□□□□ -1.94
UBXN4-208ENST00000490163 INSRP06213 1382 aa2.91□□□□□ -1.94
UBXN4-208ENST00000490163 THSD7AQ9UPZ6 1657 aa2.91□□□□□ -1.94
UBXN4-208ENST00000490163 CDK12Q9NYV4 1490 aaPredicted RBP2.91□□□□□ -1.94
UBXN4-208ENST00000490163 A0A0A0MQY5 61 aa2.91□□□□□ -1.94
UBXN4-208ENST00000490163 XKRY2A2RUG3 117 aa2.91□□□□□ -1.94
UBXN4-208ENST00000490163 E9PMD0 336 aa2.91□□□□□ -1.94
UBXN4-208ENST00000490163 H0YHG0 523 aa2.91□□□□□ -1.94
UBXN4-208ENST00000490163 SGK494L7N484 410 aa2.91□□□□□ -1.94
UBXN4-208ENST00000490163 ARPC1BO15143 372 aaKnown RBP2.91□□□□□ -1.94
UBXN4-208ENST00000490163 ZNF264O43296 627 aa2.91□□□□□ -1.94
UBXN4-208ENST00000490163 SEC14L5O43304 696 aa2.91□□□□□ -1.94
UBXN4-208ENST00000490163 MMP9P14780 707 aa2.91□□□□□ -1.94
UBXN4-208ENST00000490163 AREGP15514 252 aa2.91□□□□□ -1.94
UBXN4-208ENST00000490163 FOLR3P41439 243 aa2.91□□□□□ -1.94
UBXN4-208ENST00000490163 EPHB3P54753 998 aa2.91□□□□□ -1.94
UBXN4-208ENST00000490163 SARNPP82979 210 aaKnown RBP2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms