RNA–Protein interactions for RNA: ENST00000489581.1

TOP3B-217, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-217ENST00000489581 TCP11X1B4DZS4 312 aa16.57■□□□□ 0.24
TOP3B-217ENST00000489581 DDX3YO15523 660 aaKnown RBP16.57■□□□□ 0.24
TOP3B-217ENST00000489581 LPOP22079 712 aaPredicted RBP16.57■□□□□ 0.24
TOP3B-217ENST00000489581 HMGCLP35914 325 aa16.57■□□□□ 0.24
TOP3B-217ENST00000489581 ZBED6P86452 979 aa16.57■□□□□ 0.24
TOP3B-217ENST00000489581 DMPKQ09013 629 aa16.57■□□□□ 0.24
TOP3B-217ENST00000489581 MRPL49Q13405 166 aaKnown RBP16.57■□□□□ 0.24
TOP3B-217ENST00000489581 FAM69BQ5VUD6 431 aa16.57■□□□□ 0.24
TOP3B-217ENST00000489581 SLC9A4Q6AI14 798 aa16.57■□□□□ 0.24
TOP3B-217ENST00000489581 JMJD6Q6NYC1 403 aaPredicted RBP16.57■□□□□ 0.24
TOP3B-217ENST00000489581 FBXO38Q6PIJ6 1188 aa16.57■□□□□ 0.24
TOP3B-217ENST00000489581 FAM151BQ6UXP7 276 aa16.57■□□□□ 0.24
TOP3B-217ENST00000489581 ZNF501Q96CX3 271 aaPredicted RBP16.57■□□□□ 0.24
TOP3B-217ENST00000489581 PPM1MQ96MI6 270 aa16.57■□□□□ 0.24
TOP3B-217ENST00000489581 SRPK1Q96SB4 655 aaKnown RBP16.57■□□□□ 0.24
TOP3B-217ENST00000489581 CD180Q99467 661 aa16.57■□□□□ 0.24
TOP3B-217ENST00000489581 MAK16Q9BXY0 300 aaKnown RBP16.57■□□□□ 0.24
TOP3B-217ENST00000489581 PACSIN1Q9BY11 444 aa16.57■□□□□ 0.24
TOP3B-217ENST00000489581 XPO4Q9C0E2 1151 aaKnown RBP16.57■□□□□ 0.24
TOP3B-217ENST00000489581 SLAMF7Q9NQ25 335 aa16.57■□□□□ 0.24
TOP3B-217ENST00000489581 CUEDC1Q9NWM3 386 aaPredicted RBP16.57■□□□□ 0.24
TOP3B-217ENST00000489581 UVRAGQ9P2Y5 699 aa16.57■□□□□ 0.24
TOP3B-217ENST00000489581 A0A0A6YYK5 440 aaPredicted RBP16.56■□□□□ 0.24
TOP3B-217ENST00000489581 A6NL46 340 aa16.56■□□□□ 0.24
TOP3B-217ENST00000489581 C3orf70A6NLC5 250 aaPredicted RBP16.56■□□□□ 0.24
TOP3B-217ENST00000489581 GOLGA6L22H0YM25 854 aa16.56■□□□□ 0.24
TOP3B-217ENST00000489581 APOL1O14791 398 aa16.56■□□□□ 0.24
TOP3B-217ENST00000489581 PPP1R12AO14974 1030 aaPredicted RBP16.56■□□□□ 0.24
TOP3B-217ENST00000489581 ZNF185O15231 689 aa16.56■□□□□ 0.24
TOP3B-217ENST00000489581 KLK3P07288 261 aaPredicted RBP16.56■□□□□ 0.24
TOP3B-217ENST00000489581 H2AFZP0C0S5 128 aa16.56■□□□□ 0.24
TOP3B-217ENST00000489581 MTHFD1P11586 935 aaKnown RBP16.56■□□□□ 0.24
TOP3B-217ENST00000489581 PBX1P40424 430 aa16.56■□□□□ 0.24
TOP3B-217ENST00000489581 ARCN1P48444 511 aaKnown RBP16.56■□□□□ 0.24
TOP3B-217ENST00000489581 XRCC4Q13426 336 aa16.56■□□□□ 0.24
TOP3B-217ENST00000489581 MESDQ14696 234 aa16.56■□□□□ 0.24
TOP3B-217ENST00000489581 SLC14A2Q15849 920 aa16.56■□□□□ 0.24
TOP3B-217ENST00000489581 TEX44Q53QW1 395 aa16.56■□□□□ 0.24
TOP3B-217ENST00000489581 IZUMO3Q5VZ72 239 aa16.56■□□□□ 0.24
TOP3B-217ENST00000489581 DUS1LQ6P1R4 473 aaKnown RBP16.56■□□□□ 0.24
TOP3B-217ENST00000489581 ZNF517Q6ZMY9 492 aaPredicted RBP16.56■□□□□ 0.24
TOP3B-217ENST00000489581 H2AFVQ71UI9 128 aa16.56■□□□□ 0.24
TOP3B-217ENST00000489581 ENDOVQ8N8Q3 282 aaKnown RBP16.56■□□□□ 0.24
TOP3B-217ENST00000489581 FDCSPQ8NFU4 85 aa16.56■□□□□ 0.24
TOP3B-217ENST00000489581 PRR7Q8TB68 274 aa16.56■□□□□ 0.24
TOP3B-217ENST00000489581 ADAMTS17Q8TE56 1095 aa16.56■□□□□ 0.24
TOP3B-217ENST00000489581 OLFM3Q96PB7 478 aa16.56■□□□□ 0.24
TOP3B-217ENST00000489581 INSM2Q96T92 566 aaPredicted RBP16.56■□□□□ 0.24
TOP3B-217ENST00000489581 ZCCHC2Q9C0B9 1178 aaKnown RBP16.56■□□□□ 0.24
TOP3B-217ENST00000489581 CAPN11Q9UMQ6 739 aa16.56■□□□□ 0.24
TOP3B-217ENST00000489581 NENFQ9UMX5 172 aa16.56■□□□□ 0.24
TOP3B-217ENST00000489581 SNX7Q9UNH6 387 aa16.56■□□□□ 0.24
TOP3B-217ENST00000489581 DIDO1Q9BTC0 2240 aaKnown RBP16.55■□□□□ 0.24
TOP3B-217ENST00000489581 OR6C74A6NCV1 312 aa16.55■□□□□ 0.24
TOP3B-217ENST00000489581 BUD23O43709 281 aaKnown RBP16.55■□□□□ 0.24
TOP3B-217ENST00000489581 DPM1O60762 260 aa16.55■□□□□ 0.24
TOP3B-217ENST00000489581 ZBTB11O95625 1053 aaPredicted RBP16.55■□□□□ 0.24
TOP3B-217ENST00000489581 MBD3O95983 291 aa16.55■□□□□ 0.24
TOP3B-217ENST00000489581 COL8A1P27658 744 aa16.55■□□□□ 0.24
TOP3B-217ENST00000489581 SPAM1P38567 509 aa16.55■□□□□ 0.24
TOP3B-217ENST00000489581 KPNA2P52292 529 aaKnown RBP16.55■□□□□ 0.24
TOP3B-217ENST00000489581 IQCB1Q15051 598 aa16.55■□□□□ 0.24
TOP3B-217ENST00000489581 PPP2R5EQ16537 467 aa16.55■□□□□ 0.24
TOP3B-217ENST00000489581 LDLRAP1Q5SW96 308 aa16.55■□□□□ 0.24
TOP3B-217ENST00000489581 PLEKHS1Q5SXH7 462 aa16.55■□□□□ 0.24
TOP3B-217ENST00000489581 TMTC4Q5T4D3 741 aa16.55■□□□□ 0.24
TOP3B-217ENST00000489581 GPRC6AQ5T6X5 926 aa16.55■□□□□ 0.24
TOP3B-217ENST00000489581 ARMC6Q6NXE6 501 aa16.55■□□□□ 0.24
TOP3B-217ENST00000489581 OOSP2Q86WS3 158 aa16.55■□□□□ 0.24
TOP3B-217ENST00000489581 SLC25A41Q8N5S1 370 aa16.55■□□□□ 0.24
TOP3B-217ENST00000489581 BEND7Q8N7W2 519 aaPredicted RBP16.55■□□□□ 0.24
TOP3B-217ENST00000489581 Q8NA96 180 aa16.55■□□□□ 0.24
TOP3B-217ENST00000489581 OR8K5Q8NH50 307 aa16.55■□□□□ 0.24
TOP3B-217ENST00000489581 CTNNBL1Q8WYA6 563 aaPredicted RBP16.55■□□□□ 0.24
TOP3B-217ENST00000489581 C12orf66Q96MD2 445 aa16.55■□□□□ 0.24
TOP3B-217ENST00000489581 NUDT9Q9BW91 350 aa16.55■□□□□ 0.24
TOP3B-217ENST00000489581 TLR10Q9BXR5 811 aa16.55■□□□□ 0.24
TOP3B-217ENST00000489581 WWP1Q9H0M0 922 aa16.55■□□□□ 0.24
TOP3B-217ENST00000489581 SOHLH2Q9NX45 425 aa16.55■□□□□ 0.24
TOP3B-217ENST00000489581 FAM8A1Q9UBU6 413 aa16.55■□□□□ 0.24
TOP3B-217ENST00000489581 LUC7L2Q9Y383 392 aaKnown RBP16.55■□□□□ 0.24
TOP3B-217ENST00000489581 PCDHGB7Q9Y5F8 929 aa16.55■□□□□ 0.24
TOP3B-217ENST00000489581 DNMT3AQ9Y6K1 912 aaPredicted RBP16.55■□□□□ 0.24
TOP3B-217ENST00000489581 ANKRD12Q6UB98 2062 aa16.55■□□□□ 0.24
TOP3B-217ENST00000489581 DOPEY1Q5JWR5 2465 aa16.55■□□□□ 0.24
TOP3B-217ENST00000489581 CNTRLQ7Z7A1 2325 aa16.54■□□□□ 0.24
TOP3B-217ENST00000489581 FER1L5A0AVI2 2057 aa16.54■□□□□ 0.24
TOP3B-217ENST00000489581 MEN1O00255 615 aa16.54■□□□□ 0.24
TOP3B-217ENST00000489581 CEACAM4O75871 244 aa16.54■□□□□ 0.24
TOP3B-217ENST00000489581 TMEM63AO94886 807 aa16.54■□□□□ 0.24
TOP3B-217ENST00000489581 LCA5LO95447 670 aa16.54■□□□□ 0.24
TOP3B-217ENST00000489581 PTPN3P26045 913 aa16.54■□□□□ 0.24
TOP3B-217ENST00000489581 CD68P34810 354 aaPredicted RBP16.54■□□□□ 0.24
TOP3B-217ENST00000489581 CHRNA4P43681 627 aa16.54■□□□□ 0.24
TOP3B-217ENST00000489581 GSDMDP57764 484 aa16.54■□□□□ 0.24
TOP3B-217ENST00000489581 DYNLT1P63172 113 aa16.54■□□□□ 0.24
TOP3B-217ENST00000489581 FANCCQ00597 558 aa16.54■□□□□ 0.24
TOP3B-217ENST00000489581 FNBP1LQ5T0N5 605 aa16.54■□□□□ 0.24
TOP3B-217ENST00000489581 METRNLQ641Q3 311 aa16.54■□□□□ 0.24
TOP3B-217ENST00000489581 SLC6A19Q695T7 634 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms