RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 ELMO2Q96JJ3 720 aa11.69□□□□□ -0.54
CCHCR1-215ENST00000488920 ZNF514Q96K75 400 aaPredicted RBP11.69□□□□□ -0.54
CCHCR1-215ENST00000488920 WWP1Q9H0M0 922 aa11.69□□□□□ -0.54
CCHCR1-215ENST00000488920 IMP3Q9NV31 184 aaKnown RBP11.69□□□□□ -0.54
CCHCR1-215ENST00000488920 SIDT1Q9NXL6 827 aaKnown RBP11.69□□□□□ -0.54
CCHCR1-215ENST00000488920 GCN1Q92616 2671 aaKnown RBP11.69□□□□□ -0.54
CCHCR1-215ENST00000488920 LOC101059948A0A1B0GTJ6 334 aa11.68□□□□□ -0.54
CCHCR1-215ENST00000488920 GOLGA6L9A6NEM1 432 aa11.68□□□□□ -0.54
CCHCR1-215ENST00000488920 MGAT4DA6NG13 374 aa11.68□□□□□ -0.54
CCHCR1-215ENST00000488920 MIF4GDA9UHW6 222 aaKnown RBP11.68□□□□□ -0.54
CCHCR1-215ENST00000488920 TOX3O15405 576 aaPredicted RBP11.68□□□□□ -0.54
CCHCR1-215ENST00000488920 NKX2-8O15522 239 aa11.68□□□□□ -0.54
CCHCR1-215ENST00000488920 POLBP06746 335 aa11.68□□□□□ -0.54
CCHCR1-215ENST00000488920 ZNF28P17035 718 aa11.68□□□□□ -0.54
CCHCR1-215ENST00000488920 ZNF140P52738 457 aaPredicted RBP11.68□□□□□ -0.54
CCHCR1-215ENST00000488920 PDE1BQ01064 536 aa11.68□□□□□ -0.54
CCHCR1-215ENST00000488920 NFATC3Q12968 1075 aa11.68□□□□□ -0.54
CCHCR1-215ENST00000488920 CFAP206Q8IYR0 622 aa11.68□□□□□ -0.54
CCHCR1-215ENST00000488920 TTC13Q8NBP0 860 aa11.68□□□□□ -0.54
CCHCR1-215ENST00000488920 SPDYE1Q8NFV5 336 aaPredicted RBP11.68□□□□□ -0.54
CCHCR1-215ENST00000488920 OR2L2Q8NH16 312 aa11.68□□□□□ -0.54
CCHCR1-215ENST00000488920 KLHL6Q8WZ60 621 aa11.68□□□□□ -0.54
CCHCR1-215ENST00000488920 DCUN1D1Q96GG9 259 aa11.68□□□□□ -0.54
CCHCR1-215ENST00000488920 PPP1R2P1Q96PQ5 205 aa11.68□□□□□ -0.54
CCHCR1-215ENST00000488920 OR6C1Q96RD1 312 aa11.68□□□□□ -0.54
CCHCR1-215ENST00000488920 INSM2Q96T92 566 aaPredicted RBP11.68□□□□□ -0.54
CCHCR1-215ENST00000488920 ULBP3Q9BZM4 244 aa11.68□□□□□ -0.54
CCHCR1-215ENST00000488920 ZNF768Q9H5H4 540 aaKnown RBP11.68□□□□□ -0.54
CCHCR1-215ENST00000488920 GPN2Q9H9Y4 310 aaPredicted RBP11.68□□□□□ -0.54
CCHCR1-215ENST00000488920 ARNT2Q9HBZ2 717 aa11.68□□□□□ -0.54
CCHCR1-215ENST00000488920 IMPACTQ9P2X3 320 aa11.68□□□□□ -0.54
CCHCR1-215ENST00000488920 EPHA6Q9UF33 1036 aa11.68□□□□□ -0.54
CCHCR1-215ENST00000488920 CRLS1Q9UJA2 301 aa11.68□□□□□ -0.54
CCHCR1-215ENST00000488920 TMEM184BQ9Y519 407 aaPredicted RBP11.68□□□□□ -0.54
CCHCR1-215ENST00000488920 PIEZO2Q9H5I5 2752 aa11.68□□□□□ -0.54
CCHCR1-215ENST00000488920 LDB2O43679 373 aa11.67□□□□□ -0.54
CCHCR1-215ENST00000488920 SGTAO43765 313 aa11.67□□□□□ -0.54
CCHCR1-215ENST00000488920 PRKAR1AP10644 381 aa11.67□□□□□ -0.54
CCHCR1-215ENST00000488920 MTHFD1P11586 935 aaKnown RBP11.67□□□□□ -0.54
CCHCR1-215ENST00000488920 CDKN1CP49918 316 aaPredicted RBP11.67□□□□□ -0.54
CCHCR1-215ENST00000488920 GDF10P55107 478 aa11.67□□□□□ -0.54
CCHCR1-215ENST00000488920 KLF1Q13351 362 aaPredicted RBP11.67□□□□□ -0.54
CCHCR1-215ENST00000488920 PLCL1Q15111 1095 aa11.67□□□□□ -0.54
CCHCR1-215ENST00000488920 BCL7AQ4VC05 210 aa11.67□□□□□ -0.54
CCHCR1-215ENST00000488920 KCTD11Q693B1 232 aa11.67□□□□□ -0.54
CCHCR1-215ENST00000488920 DUS1LQ6P1R4 473 aaKnown RBP11.67□□□□□ -0.54
CCHCR1-215ENST00000488920 XKR5Q6UX68 686 aa11.67□□□□□ -0.54
CCHCR1-215ENST00000488920 PRSS42Q7Z5A4 293 aa11.67□□□□□ -0.54
CCHCR1-215ENST00000488920 KLHDC8BQ8IXV7 354 aa11.67□□□□□ -0.54
CCHCR1-215ENST00000488920 NXPE1Q8N323 547 aa11.67□□□□□ -0.54
CCHCR1-215ENST00000488920 TXLNBQ8N3L3 684 aa11.67□□□□□ -0.54
CCHCR1-215ENST00000488920 LILRA3Q8N6C8 439 aaPredicted RBP11.67□□□□□ -0.54
CCHCR1-215ENST00000488920 KIAA1143Q96AT1 154 aaPredicted RBP11.67□□□□□ -0.54
CCHCR1-215ENST00000488920 ULK4Q96C45 1275 aa11.67□□□□□ -0.54
CCHCR1-215ENST00000488920 LRRC45Q96CN5 670 aa11.67□□□□□ -0.54
CCHCR1-215ENST00000488920 HES6Q96HZ4 224 aa11.67□□□□□ -0.54
CCHCR1-215ENST00000488920 DNAJC1Q96KC8 554 aaKnown RBP11.67□□□□□ -0.54
CCHCR1-215ENST00000488920 C12orf66Q96MD2 445 aa11.67□□□□□ -0.54
CCHCR1-215ENST00000488920 TMEM121Q9BTD3 319 aa11.67□□□□□ -0.54
CCHCR1-215ENST00000488920 RAB33BQ9H082 229 aa11.67□□□□□ -0.54
CCHCR1-215ENST00000488920 PIH1D1Q9NWS0 290 aaKnown RBP11.67□□□□□ -0.54
CCHCR1-215ENST00000488920 IL17BQ9UHF5 180 aa11.67□□□□□ -0.54
CCHCR1-215ENST00000488920 FEZ2Q9UHY8 353 aaPredicted RBP11.67□□□□□ -0.54
CCHCR1-215ENST00000488920 ACSL5Q9ULC5 683 aa11.67□□□□□ -0.54
CCHCR1-215ENST00000488920 ZNF462Q96JM2 2506 aa11.67□□□□□ -0.54
CCHCR1-215ENST00000488920 SDK2Q58EX2 2172 aa11.67□□□□□ -0.54
CCHCR1-215ENST00000488920 ZFC3H1O60293 1989 aaKnown RBP11.67□□□□□ -0.54
CCHCR1-215ENST00000488920 IGHV5-51A0A0C4DH38 117 aa11.66□□□□□ -0.54
CCHCR1-215ENST00000488920 ZNF891A8MT65 544 aaPredicted RBP11.66□□□□□ -0.54
CCHCR1-215ENST00000488920 AGAP14A8MT82 685 aa11.66□□□□□ -0.54
CCHCR1-215ENST00000488920 PYCARD-AS1I3L0S3 204 aa11.66□□□□□ -0.54
CCHCR1-215ENST00000488920 J3QKU1 62 aa11.66□□□□□ -0.54
CCHCR1-215ENST00000488920 ZNF189O75820 626 aaPredicted RBP11.66□□□□□ -0.54
CCHCR1-215ENST00000488920 DLGAP3O95886 979 aa11.66□□□□□ -0.54
CCHCR1-215ENST00000488920 SLC35G4P0C7Q5 338 aa11.66□□□□□ -0.54
CCHCR1-215ENST00000488920 PRSS56P0CW18 603 aa11.66□□□□□ -0.54
CCHCR1-215ENST00000488920 RALBP11234 206 aa11.66□□□□□ -0.54
CCHCR1-215ENST00000488920 ATP1B2P14415 290 aaPredicted RBP11.66□□□□□ -0.54
CCHCR1-215ENST00000488920 ITGB6P18564 788 aa11.66□□□□□ -0.54
CCHCR1-215ENST00000488920 NELFEP18615 380 aaKnown RBP11.66□□□□□ -0.54
CCHCR1-215ENST00000488920 ITGALP20701 1170 aa11.66□□□□□ -0.54
CCHCR1-215ENST00000488920 CDC25BP30305 580 aa11.66□□□□□ -0.54
CCHCR1-215ENST00000488920 MC4RP32245 332 aa11.66□□□□□ -0.54
CCHCR1-215ENST00000488920 HADHAP40939 763 aa11.66□□□□□ -0.54
CCHCR1-215ENST00000488920 ABHD18Q0P651 414 aa11.66□□□□□ -0.54
CCHCR1-215ENST00000488920 SEPT6Q14141 434 aa11.66□□□□□ -0.54
CCHCR1-215ENST00000488920 KRT33BQ14525 404 aa11.66□□□□□ -0.54
CCHCR1-215ENST00000488920 IL11RAQ14626 422 aa11.66□□□□□ -0.54
CCHCR1-215ENST00000488920 GSE1Q14687 1217 aa11.66□□□□□ -0.54
CCHCR1-215ENST00000488920 KCNAB1Q14722 419 aa11.66□□□□□ -0.54
CCHCR1-215ENST00000488920 POU6F1Q14863 301 aa11.66□□□□□ -0.54
CCHCR1-215ENST00000488920 ZRANB3Q5FWF4 1079 aa11.66□□□□□ -0.54
CCHCR1-215ENST00000488920 KLHL35Q6PF15 583 aa11.66□□□□□ -0.54
CCHCR1-215ENST00000488920 BORAQ6PGQ7 559 aa11.66□□□□□ -0.54
CCHCR1-215ENST00000488920 C6orf15Q6UXA7 325 aaPredicted RBP11.66□□□□□ -0.54
CCHCR1-215ENST00000488920 TAS2R42Q7RTR8 314 aa11.66□□□□□ -0.54
CCHCR1-215ENST00000488920 SNX20Q7Z614 316 aa11.66□□□□□ -0.54
CCHCR1-215ENST00000488920 RASGRP3Q8IV61 690 aa11.66□□□□□ -0.54
CCHCR1-215ENST00000488920 GALNT6Q8NCL4 622 aa11.66□□□□□ -0.54
CCHCR1-215ENST00000488920 SLC35B2Q8TB61 432 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms