RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 PNMA8BQ9ULN7 279 aaPredicted RBP19.11■□□□□ 0.65
CCM2-216ENST00000488727 ZFHX2Q9C0A1 2572 aaPredicted RBP19.1■□□□□ 0.65
CCM2-216ENST00000488727 CCDC162PA2VCL2 907 aa19.1■□□□□ 0.65
CCM2-216ENST00000488727 TMEM202A6NGA9 273 aa19.1■□□□□ 0.65
CCM2-216ENST00000488727 PRSS56P0CW18 603 aa19.1■□□□□ 0.65
CCM2-216ENST00000488727 TGM1P22735 817 aa19.1■□□□□ 0.65
CCM2-216ENST00000488727 ARNTP27540 789 aa19.1■□□□□ 0.65
CCM2-216ENST00000488727 CTSKP43235 329 aa19.1■□□□□ 0.65
CCM2-216ENST00000488727 RASSF2P50749 326 aa19.1■□□□□ 0.65
CCM2-216ENST00000488727 THOP1P52888 689 aa19.1■□□□□ 0.65
CCM2-216ENST00000488727 KIAA1024LP59773 190 aa19.1■□□□□ 0.65
CCM2-216ENST00000488727 NFATC2Q13469 925 aa19.1■□□□□ 0.65
CCM2-216ENST00000488727 FZD2Q14332 565 aa19.1■□□□□ 0.65
CCM2-216ENST00000488727 SF3A2Q15428 464 aaKnown RBP19.1■□□□□ 0.65
CCM2-216ENST00000488727 CHI3L2Q15782 390 aa19.1■□□□□ 0.65
CCM2-216ENST00000488727 TAF1BQ53T94 588 aaPredicted RBP19.1■□□□□ 0.65
CCM2-216ENST00000488727 KIF2BQ8N4N8 673 aa19.1■□□□□ 0.65
CCM2-216ENST00000488727 HIC2Q96JB3 615 aa19.1■□□□□ 0.65
CCM2-216ENST00000488727 VPS35Q96QK1 796 aa19.1■□□□□ 0.65
CCM2-216ENST00000488727 ASB8Q9H765 288 aa19.1■□□□□ 0.65
CCM2-216ENST00000488727 PHPT1Q9NRX4 125 aaPredicted RBP19.1■□□□□ 0.65
CCM2-216ENST00000488727 SEMA4GQ9NTN9 838 aa19.1■□□□□ 0.65
CCM2-216ENST00000488727 KCNK4Q9NYG8 393 aa19.1■□□□□ 0.65
CCM2-216ENST00000488727 EMCNQ9ULC0 261 aa19.1■□□□□ 0.65
CCM2-216ENST00000488727 TRIM33Q9UPN9 1127 aa19.1■□□□□ 0.65
CCM2-216ENST00000488727 EP300Q09472 2414 aaPredicted RBP19.1■□□□□ 0.65
CCM2-216ENST00000488727 A0A0G2JND7 137 aa19.09■□□□□ 0.65
CCM2-216ENST00000488727 AGAP14A8MT82 685 aa19.09■□□□□ 0.65
CCM2-216ENST00000488727 CACNB4O00305 520 aaPredicted RBP19.09■□□□□ 0.65
CCM2-216ENST00000488727 KHNYNO15037 678 aaKnown RBP19.09■□□□□ 0.65
CCM2-216ENST00000488727 PLIN3O60664 434 aa19.09■□□□□ 0.65
CCM2-216ENST00000488727 HOXC4P09017 264 aaPredicted RBP19.09■□□□□ 0.65
CCM2-216ENST00000488727 ERVK-10P10266 1014 aa19.09■□□□□ 0.65
CCM2-216ENST00000488727 SPRP35270 261 aaPredicted RBP19.09■□□□□ 0.65
CCM2-216ENST00000488727 CDKN1CP49918 316 aaPredicted RBP19.09■□□□□ 0.65
CCM2-216ENST00000488727 LIMK2P53671 638 aa19.09■□□□□ 0.65
CCM2-216ENST00000488727 CSE1LP55060 971 aaKnown RBP19.09■□□□□ 0.65
CCM2-216ENST00000488727 ITGA9Q13797 1035 aa19.09■□□□□ 0.65
CCM2-216ENST00000488727 MACC1Q6ZN28 852 aa19.09■□□□□ 0.65
CCM2-216ENST00000488727 MTDHQ86UE4 582 aaKnown RBP19.09■□□□□ 0.65
CCM2-216ENST00000488727 DCP2Q8IU60 420 aaKnown RBP19.09■□□□□ 0.65
CCM2-216ENST00000488727 BTN2A2Q8WVV5 523 aa19.09■□□□□ 0.65
CCM2-216ENST00000488727 GLYATL1Q969I3 302 aa19.09■□□□□ 0.65
CCM2-216ENST00000488727 SLC7A6OSQ96CW6 309 aaPredicted RBP19.09■□□□□ 0.65
CCM2-216ENST00000488727 NUSAP1Q9BXS6 441 aaKnown RBP19.09■□□□□ 0.65
CCM2-216ENST00000488727 FAM96AQ9H5X1 160 aa19.09■□□□□ 0.65
CCM2-216ENST00000488727 SMOXQ9NWM0 555 aa19.09■□□□□ 0.65
CCM2-216ENST00000488727 HEY2Q9UBP5 337 aa19.09■□□□□ 0.65
CCM2-216ENST00000488727 OAS3Q9Y6K5 1087 aaKnown RBP19.09■□□□□ 0.65
CCM2-216ENST00000488727 LNP1A1A4G5 178 aa19.08■□□□□ 0.65
CCM2-216ENST00000488727 MAGEC1O60732 1142 aa19.08■□□□□ 0.65
CCM2-216ENST00000488727 HAUS5O94927 633 aa19.08■□□□□ 0.65
CCM2-216ENST00000488727 GOT2P00505 430 aaKnown RBP19.08■□□□□ 0.65
CCM2-216ENST00000488727 KHDC1Q4VXA5 237 aaKnown RBP19.08■□□□□ 0.65
CCM2-216ENST00000488727 PRAMEF14Q5SWL7 426 aa19.08■□□□□ 0.65
CCM2-216ENST00000488727 ZNF648Q5T619 568 aaPredicted RBP19.08■□□□□ 0.65
CCM2-216ENST00000488727 PSAPL1Q6NUJ1 521 aa19.08■□□□□ 0.65
CCM2-216ENST00000488727 SNX20Q7Z614 316 aa19.08■□□□□ 0.65
CCM2-216ENST00000488727 PNPLA1Q8N8W4 532 aa19.08■□□□□ 0.65
CCM2-216ENST00000488727 FGF22Q9HCT0 170 aa19.08■□□□□ 0.65
CCM2-216ENST00000488727 SLC30A1Q9Y6M5 507 aa19.08■□□□□ 0.65
CCM2-216ENST00000488727 TDRD6O60522 2096 aaKnown RBP19.08■□□□□ 0.64
CCM2-216ENST00000488727 TRBV5-4A0A0C4DH59 114 aa19.08■□□□□ 0.64
CCM2-216ENST00000488727 ARHGAP33O14559 1287 aa19.08■□□□□ 0.64
CCM2-216ENST00000488727 LRP3O75074 770 aa19.08■□□□□ 0.64
CCM2-216ENST00000488727 MTX2O75431 263 aa19.08■□□□□ 0.64
CCM2-216ENST00000488727 WFS1O76024 890 aa19.08■□□□□ 0.64
CCM2-216ENST00000488727 SLC25A14O95258 325 aaPredicted RBP19.08■□□□□ 0.64
CCM2-216ENST00000488727 VAPBO95292 243 aa19.08■□□□□ 0.64
CCM2-216ENST00000488727 ENGP17813 658 aa19.08■□□□□ 0.64
CCM2-216ENST00000488727 ITGALP20701 1170 aa19.08■□□□□ 0.64
CCM2-216ENST00000488727 SERPINB8P50452 374 aa19.08■□□□□ 0.64
CCM2-216ENST00000488727 MNAT1P51948 309 aa19.08■□□□□ 0.64
CCM2-216ENST00000488727 PRAMEP78395 509 aa19.08■□□□□ 0.64
CCM2-216ENST00000488727 EIF2B5Q13144 721 aaKnown RBP19.08■□□□□ 0.64
CCM2-216ENST00000488727 PTK2BQ14289 1009 aa19.08■□□□□ 0.64
CCM2-216ENST00000488727 KRT72Q14CN4 511 aa19.08■□□□□ 0.64
CCM2-216ENST00000488727 SMAD1Q15797 465 aaKnown RBP19.08■□□□□ 0.64
CCM2-216ENST00000488727 CSRP2Q16527 193 aa19.08■□□□□ 0.64
CCM2-216ENST00000488727 ZRANB3Q5FWF4 1079 aa19.08■□□□□ 0.64
CCM2-216ENST00000488727 TEDDM1Q5T9Z0 273 aa19.08■□□□□ 0.64
CCM2-216ENST00000488727 N4BP2L1Q5TBK1 243 aaPredicted RBP19.08■□□□□ 0.64
CCM2-216ENST00000488727 CES4AQ5XG92 561 aa19.08■□□□□ 0.64
CCM2-216ENST00000488727 ICE2Q659A1 982 aa19.08■□□□□ 0.64
CCM2-216ENST00000488727 KIAA0930Q6ICG6 404 aaPredicted RBP19.08■□□□□ 0.64
CCM2-216ENST00000488727 AFTPHQ6ULP2 937 aa19.08■□□□□ 0.64
CCM2-216ENST00000488727 PIANPQ8IYJ0 282 aa19.08■□□□□ 0.64
CCM2-216ENST00000488727 OR2I1PQ8NGU4 316 aa19.08■□□□□ 0.64
CCM2-216ENST00000488727 OR6P1Q8NGX9 317 aa19.08■□□□□ 0.64
CCM2-216ENST00000488727 WDR92Q96MX6 357 aa19.08■□□□□ 0.64
CCM2-216ENST00000488727 SIKE1Q9BRV8 207 aa19.08■□□□□ 0.64
CCM2-216ENST00000488727 MCMBPQ9BTE3 642 aa19.08■□□□□ 0.64
CCM2-216ENST00000488727 THAP1Q9NVV9 213 aa19.08■□□□□ 0.64
CCM2-216ENST00000488727 NSMCE4AQ9NXX6 385 aa19.08■□□□□ 0.64
CCM2-216ENST00000488727 IL1RAPL1Q9NZN1 696 aa19.08■□□□□ 0.64
CCM2-216ENST00000488727 KLF15Q9UIH9 416 aa19.08■□□□□ 0.64
CCM2-216ENST00000488727 HAO1Q9UJM8 370 aa19.08■□□□□ 0.64
CCM2-216ENST00000488727 TMEM98Q9Y2Y6 226 aa19.08■□□□□ 0.64
CCM2-216ENST00000488727 FUCA1P04066 466 aa19.07■□□□□ 0.64
CCM2-216ENST00000488727 CEACAM5P06731 702 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms