RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 CPNE9Q8IYJ1 553 aa12.53□□□□□ -0.4
NELFE-209ENST00000488426 FAM160A2Q8N612 972 aaPredicted RBP12.53□□□□□ -0.4
NELFE-209ENST00000488426 CLDN19Q8N6F1 224 aa12.53□□□□□ -0.4
NELFE-209ENST00000488426 FRMD1Q8N878 549 aa12.53□□□□□ -0.4
NELFE-209ENST00000488426 DDHD1Q8NEL9 900 aa12.53□□□□□ -0.4
NELFE-209ENST00000488426 EEF1AKMT1Q8WVE0 214 aa12.53□□□□□ -0.4
NELFE-209ENST00000488426 SCAMP4Q969E2 229 aa12.53□□□□□ -0.4
NELFE-209ENST00000488426 L3HYPDHQ96EM0 354 aa12.53□□□□□ -0.4
NELFE-209ENST00000488426 CCDC97Q96F63 343 aaPredicted RBP12.53□□□□□ -0.4
NELFE-209ENST00000488426 DTD2Q96FN9 168 aa12.53□□□□□ -0.4
NELFE-209ENST00000488426 LRRC37BQ96QE4 947 aa12.53□□□□□ -0.4
NELFE-209ENST00000488426 TRMOQ9BU70 441 aa12.53□□□□□ -0.4
NELFE-209ENST00000488426 ILKAPQ9H0C8 392 aaPredicted RBP12.53□□□□□ -0.4
NELFE-209ENST00000488426 RSPH9Q9H1X1 276 aaPredicted RBP12.53□□□□□ -0.4
NELFE-209ENST00000488426 SPATS2LQ9NUQ6 558 aaKnown RBP12.53□□□□□ -0.4
NELFE-209ENST00000488426 MARCOQ9UEW3 520 aaPredicted RBP12.53□□□□□ -0.4
NELFE-209ENST00000488426 TMPRSS11EQ9UL52 423 aa12.53□□□□□ -0.4
NELFE-209ENST00000488426 RNF112Q9ULX5 631 aa12.53□□□□□ -0.4
NELFE-209ENST00000488426 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.53□□□□□ -0.4
NELFE-209ENST00000488426 PRSS21Q9Y6M0 314 aa12.53□□□□□ -0.4
NELFE-209ENST00000488426 LRRK1Q38SD2 2015 aa12.53□□□□□ -0.4
NELFE-209ENST00000488426 PIKFYVEQ9Y2I7 2098 aa12.53□□□□□ -0.4
NELFE-209ENST00000488426 NEMP2A6NFY4 417 aa12.53□□□□□ -0.4
NELFE-209ENST00000488426 QSOX1O00391 747 aa12.53□□□□□ -0.4
NELFE-209ENST00000488426 BTN3A1O00481 513 aa12.53□□□□□ -0.4
NELFE-209ENST00000488426 SYNCRIPO60506 623 aaKnown RBP12.53□□□□□ -0.4
NELFE-209ENST00000488426 AP2A2O94973 939 aa12.53□□□□□ -0.4
NELFE-209ENST00000488426 SLC25A14O95258 325 aaPredicted RBP12.53□□□□□ -0.4
NELFE-209ENST00000488426 ADH1BP00325 375 aa12.53□□□□□ -0.4
NELFE-209ENST00000488426 KITP10721 976 aa12.53□□□□□ -0.4
NELFE-209ENST00000488426 IMPDH1P20839 514 aa12.53□□□□□ -0.4
NELFE-209ENST00000488426 DGKAP23743 735 aa12.53□□□□□ -0.4
NELFE-209ENST00000488426 KCNC1P48547 511 aa12.53□□□□□ -0.4
NELFE-209ENST00000488426 B4GALNT1Q00973 533 aa12.53□□□□□ -0.4
NELFE-209ENST00000488426 SPDYAQ5MJ70 313 aa12.53□□□□□ -0.4
NELFE-209ENST00000488426 LDLRAP1Q5SW96 308 aa12.53□□□□□ -0.4
NELFE-209ENST00000488426 ATG14Q6ZNE5 492 aa12.53□□□□□ -0.4
NELFE-209ENST00000488426 KIRREL3Q8IZU9 778 aa12.53□□□□□ -0.4
NELFE-209ENST00000488426 ZBTB2Q8N680 514 aa12.53□□□□□ -0.4
NELFE-209ENST00000488426 CCNYL1Q8N7R7 359 aa12.53□□□□□ -0.4
NELFE-209ENST00000488426 DCUN1D1Q96GG9 259 aa12.53□□□□□ -0.4
NELFE-209ENST00000488426 TMEM237Q96Q45 408 aa12.53□□□□□ -0.4
NELFE-209ENST00000488426 WRAP53Q9BUR4 548 aaKnown RBP12.53□□□□□ -0.4
NELFE-209ENST00000488426 RIOK2Q9BVS4 552 aaKnown RBP12.53□□□□□ -0.4
NELFE-209ENST00000488426 TPSD1Q9BZJ3 242 aa12.53□□□□□ -0.4
NELFE-209ENST00000488426 ABCG8Q9H221 673 aa12.53□□□□□ -0.4
NELFE-209ENST00000488426 FBRSQ9HAH7 460 aa12.53□□□□□ -0.4
NELFE-209ENST00000488426 RALGAPA1Q6GYQ0 2036 aa12.52□□□□□ -0.4
NELFE-209ENST00000488426 SLCO1B7G3V0H7 640 aa12.52□□□□□ -0.41
NELFE-209ENST00000488426 EIF3FO00303 357 aaPredicted RBP12.52□□□□□ -0.41
NELFE-209ENST00000488426 AP1G1O43747 822 aa12.52□□□□□ -0.41
NELFE-209ENST00000488426 KLF8O95600 359 aaPredicted RBP12.52□□□□□ -0.41
NELFE-209ENST00000488426 CBSLP0DN79 551 aa12.52□□□□□ -0.41
NELFE-209ENST00000488426 MTHFD2P13995 350 aa12.52□□□□□ -0.41
NELFE-209ENST00000488426 ATP1B2P14415 290 aaPredicted RBP12.52□□□□□ -0.41
NELFE-209ENST00000488426 GM2AP17900 193 aa12.52□□□□□ -0.41
NELFE-209ENST00000488426 C5AR1P21730 350 aa12.52□□□□□ -0.41
NELFE-209ENST00000488426 AKT1P31749 480 aa12.52□□□□□ -0.41
NELFE-209ENST00000488426 CBSP35520 551 aa12.52□□□□□ -0.41
NELFE-209ENST00000488426 P2RY2P41231 377 aa12.52□□□□□ -0.41
NELFE-209ENST00000488426 WASP42768 502 aa12.52□□□□□ -0.41
NELFE-209ENST00000488426 AQP5P55064 265 aa12.52□□□□□ -0.41
NELFE-209ENST00000488426 NAA20P61599 178 aa12.52□□□□□ -0.41
NELFE-209ENST00000488426 HERVK_113P63132 956 aa12.52□□□□□ -0.41
NELFE-209ENST00000488426 GALNT1Q10472 559 aaPredicted RBP12.52□□□□□ -0.41
NELFE-209ENST00000488426 TSNQ15631 228 aaKnown RBP12.52□□□□□ -0.41
NELFE-209ENST00000488426 CST6Q15828 149 aa12.52□□□□□ -0.41
NELFE-209ENST00000488426 ARL13AQ5H913 290 aaPredicted RBP12.52□□□□□ -0.41
NELFE-209ENST00000488426 ANO7Q6IWH7 933 aa12.52□□□□□ -0.41
NELFE-209ENST00000488426 RAB44Q7Z6P3 723 aaPredicted RBP12.52□□□□□ -0.41
NELFE-209ENST00000488426 ADAMTSL2Q86TH1 951 aa12.52□□□□□ -0.41
NELFE-209ENST00000488426 NLRP8Q86W28 1048 aa12.52□□□□□ -0.41
NELFE-209ENST00000488426 FITM2Q8N6M3 262 aa12.52□□□□□ -0.41
NELFE-209ENST00000488426 LKAAEAR1Q8TD35 194 aa12.52□□□□□ -0.41
NELFE-209ENST00000488426 BTN2A2Q8WVV5 523 aa12.52□□□□□ -0.41
NELFE-209ENST00000488426 FUBP1Q96AE4 644 aaKnown RBP12.52□□□□□ -0.41
NELFE-209ENST00000488426 AP2M1Q96CW1 435 aa12.52□□□□□ -0.41
NELFE-209ENST00000488426 GABRG3Q99928 467 aa12.52□□□□□ -0.41
NELFE-209ENST00000488426 ERVK-6Q9BXR3 956 aa12.52□□□□□ -0.41
NELFE-209ENST00000488426 CYP4F12Q9HCS2 524 aa12.52□□□□□ -0.41
NELFE-209ENST00000488426 DNAJC28Q9NX36 388 aa12.52□□□□□ -0.41
NELFE-209ENST00000488426 KCTD5Q9NXV2 234 aa12.52□□□□□ -0.41
NELFE-209ENST00000488426 NPEPPSL1A6NEC2 478 aa12.51□□□□□ -0.41
NELFE-209ENST00000488426 FADS2P1A8MWK0 482 aa12.51□□□□□ -0.41
NELFE-209ENST00000488426 UBXN8O00124 270 aa12.51□□□□□ -0.41
NELFE-209ENST00000488426 CDC7O00311 574 aa12.51□□□□□ -0.41
NELFE-209ENST00000488426 NEMP1O14524 444 aa12.51□□□□□ -0.41
NELFE-209ENST00000488426 AXIN1O15169 862 aa12.51□□□□□ -0.41
NELFE-209ENST00000488426 KLK8O60259 260 aa12.51□□□□□ -0.41
NELFE-209ENST00000488426 TRIM16O95361 564 aa12.51□□□□□ -0.41
NELFE-209ENST00000488426 CHRNGP07510 517 aa12.51□□□□□ -0.41
NELFE-209ENST00000488426 NTSR1P30989 418 aa12.51□□□□□ -0.41
NELFE-209ENST00000488426 CNTN1Q12860 1018 aa12.51□□□□□ -0.41
NELFE-209ENST00000488426 GALNTL6Q49A17 601 aa12.51□□□□□ -0.41
NELFE-209ENST00000488426 ZNF678Q5SXM1 525 aa12.51□□□□□ -0.41
NELFE-209ENST00000488426 PIP5KL1Q5T9C9 394 aa12.51□□□□□ -0.41
NELFE-209ENST00000488426 SDE2Q6IQ49 451 aa12.51□□□□□ -0.41
NELFE-209ENST00000488426 FRMD7Q6ZUT3 714 aa12.51□□□□□ -0.41
NELFE-209ENST00000488426 TRMT11Q7Z4G4 463 aaKnown RBP12.51□□□□□ -0.41
NELFE-209ENST00000488426 LSMEM2Q8N112 164 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms