RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.98■□□□□ 0.63
SMPDL3A-202ENST00000487215 LRFN5Q96NI6 719 aa18.98■□□□□ 0.63
SMPDL3A-202ENST00000487215 MFRPQ9BY79 579 aa18.98■□□□□ 0.63
SMPDL3A-202ENST00000487215 ZCCHC2Q9C0B9 1178 aaKnown RBP18.98■□□□□ 0.63
SMPDL3A-202ENST00000487215 LATS2Q9NRM7 1088 aa18.98■□□□□ 0.63
SMPDL3A-202ENST00000487215 UBP1Q9NZI7 540 aa18.98■□□□□ 0.63
SMPDL3A-202ENST00000487215 SNX7Q9UNH6 387 aa18.98■□□□□ 0.63
SMPDL3A-202ENST00000487215 C3orf70A6NLC5 250 aaPredicted RBP18.97■□□□□ 0.63
SMPDL3A-202ENST00000487215 OR2AG2A6NM03 316 aa18.97■□□□□ 0.63
SMPDL3A-202ENST00000487215 ZNF487B1APH4 448 aa18.97■□□□□ 0.63
SMPDL3A-202ENST00000487215 APOL1O14791 398 aa18.97■□□□□ 0.63
SMPDL3A-202ENST00000487215 PPP1R12AO14974 1030 aaPredicted RBP18.97■□□□□ 0.63
SMPDL3A-202ENST00000487215 UGT1A9O60656 530 aa18.97■□□□□ 0.63
SMPDL3A-202ENST00000487215 TMEM63AO94886 807 aa18.97■□□□□ 0.63
SMPDL3A-202ENST00000487215 UGT1A6P19224 532 aa18.97■□□□□ 0.63
SMPDL3A-202ENST00000487215 UGT1A1P22309 533 aa18.97■□□□□ 0.63
SMPDL3A-202ENST00000487215 UGT1A4P22310 534 aa18.97■□□□□ 0.63
SMPDL3A-202ENST00000487215 PBLDP30039 288 aaPredicted RBP18.97■□□□□ 0.63
SMPDL3A-202ENST00000487215 SPAM1P38567 509 aa18.97■□□□□ 0.63
SMPDL3A-202ENST00000487215 PBX1P40424 430 aa18.97■□□□□ 0.63
SMPDL3A-202ENST00000487215 ZBED6P86452 979 aa18.97■□□□□ 0.63
SMPDL3A-202ENST00000487215 XRCC4Q13426 336 aa18.97■□□□□ 0.63
SMPDL3A-202ENST00000487215 LDLRAP1Q5SW96 308 aa18.97■□□□□ 0.63
SMPDL3A-202ENST00000487215 PLEKHS1Q5SXH7 462 aa18.97■□□□□ 0.63
SMPDL3A-202ENST00000487215 PRAMEF17Q5VTA0 474 aa18.97■□□□□ 0.63
SMPDL3A-202ENST00000487215 FAM69BQ5VUD6 431 aa18.97■□□□□ 0.63
SMPDL3A-202ENST00000487215 SLC6A19Q695T7 634 aa18.97■□□□□ 0.63
SMPDL3A-202ENST00000487215 FBXO38Q6PIJ6 1188 aa18.97■□□□□ 0.63
SMPDL3A-202ENST00000487215 TMEM220Q6QAJ8 160 aa18.97■□□□□ 0.63
SMPDL3A-202ENST00000487215 FAM151BQ6UXP7 276 aa18.97■□□□□ 0.63
SMPDL3A-202ENST00000487215 DDHD1Q8NEL9 900 aa18.97■□□□□ 0.63
SMPDL3A-202ENST00000487215 OR8K5Q8NH50 307 aa18.97■□□□□ 0.63
SMPDL3A-202ENST00000487215 DTX3LQ8TDB6 740 aa18.97■□□□□ 0.63
SMPDL3A-202ENST00000487215 CPLX3Q8WVH0 158 aa18.97■□□□□ 0.63
SMPDL3A-202ENST00000487215 PPM1MQ96MI6 270 aa18.97■□□□□ 0.63
SMPDL3A-202ENST00000487215 INSM2Q96T92 566 aaPredicted RBP18.97■□□□□ 0.63
SMPDL3A-202ENST00000487215 NUDT9Q9BW91 350 aa18.97■□□□□ 0.63
SMPDL3A-202ENST00000487215 PACSIN1Q9BY11 444 aa18.97■□□□□ 0.63
SMPDL3A-202ENST00000487215 SLC29A3Q9BZD2 475 aa18.97■□□□□ 0.63
SMPDL3A-202ENST00000487215 UGT1A7Q9HAW7 530 aa18.97■□□□□ 0.63
SMPDL3A-202ENST00000487215 UGT1A10Q9HAW8 530 aa18.97■□□□□ 0.63
SMPDL3A-202ENST00000487215 UGT1A8Q9HAW9 530 aa18.97■□□□□ 0.63
SMPDL3A-202ENST00000487215 SLAMF7Q9NQ25 335 aa18.97■□□□□ 0.63
SMPDL3A-202ENST00000487215 DNMT3AQ9Y6K1 912 aaPredicted RBP18.97■□□□□ 0.63
SMPDL3A-202ENST00000487215 A0A0A6YYK5 440 aaPredicted RBP18.96■□□□□ 0.63
SMPDL3A-202ENST00000487215 SSU72P8A0A1W2PR75 194 aa18.96■□□□□ 0.63
SMPDL3A-202ENST00000487215 MEN1O00255 615 aa18.96■□□□□ 0.63
SMPDL3A-202ENST00000487215 KLK3P07288 261 aaPredicted RBP18.96■□□□□ 0.63
SMPDL3A-202ENST00000487215 RAB40ALP0C0E4 278 aa18.96■□□□□ 0.63
SMPDL3A-202ENST00000487215 H2AFZP0C0S5 128 aa18.96■□□□□ 0.63
SMPDL3A-202ENST00000487215 ARCN1P48444 511 aaKnown RBP18.96■□□□□ 0.63
SMPDL3A-202ENST00000487215 KPNA2P52292 529 aaKnown RBP18.96■□□□□ 0.63
SMPDL3A-202ENST00000487215 GSDMDP57764 484 aa18.96■□□□□ 0.63
SMPDL3A-202ENST00000487215 TEX44Q53QW1 395 aa18.96■□□□□ 0.63
SMPDL3A-202ENST00000487215 TMTC4Q5T4D3 741 aa18.96■□□□□ 0.63
SMPDL3A-202ENST00000487215 GPRC6AQ5T6X5 926 aa18.96■□□□□ 0.63
SMPDL3A-202ENST00000487215 ZDHHC20Q5W0Z9 365 aa18.96■□□□□ 0.63
SMPDL3A-202ENST00000487215 METRNLQ641Q3 311 aa18.96■□□□□ 0.63
SMPDL3A-202ENST00000487215 ZNF787Q6DD87 383 aa18.96■□□□□ 0.63
SMPDL3A-202ENST00000487215 H2AFVQ71UI9 128 aa18.96■□□□□ 0.63
SMPDL3A-202ENST00000487215 DSELQ8IZU8 1212 aa18.96■□□□□ 0.63
SMPDL3A-202ENST00000487215 CARFQ8N187 725 aa18.96■□□□□ 0.63
SMPDL3A-202ENST00000487215 RBMXL3Q8N7X1 1067 aaKnown RBP18.96■□□□□ 0.63
SMPDL3A-202ENST00000487215 PRR7Q8TB68 274 aa18.96■□□□□ 0.63
SMPDL3A-202ENST00000487215 WWP1Q9H0M0 922 aa18.96■□□□□ 0.63
SMPDL3A-202ENST00000487215 TRABDQ9H4I3 376 aa18.96■□□□□ 0.63
SMPDL3A-202ENST00000487215 SOHLH2Q9NX45 425 aa18.96■□□□□ 0.63
SMPDL3A-202ENST00000487215 IL17CQ9P0M4 197 aa18.96■□□□□ 0.63
SMPDL3A-202ENST00000487215 TMEM63CQ9P1W3 806 aa18.96■□□□□ 0.63
SMPDL3A-202ENST00000487215 MAP10Q9P2G4 905 aa18.96■□□□□ 0.63
SMPDL3A-202ENST00000487215 SLC24A2Q9UI40 661 aa18.96■□□□□ 0.63
SMPDL3A-202ENST00000487215 LCMT1Q9UIC8 334 aa18.96■□□□□ 0.63
SMPDL3A-202ENST00000487215 TCFL5Q9UL49 500 aa18.96■□□□□ 0.63
SMPDL3A-202ENST00000487215 CAPN11Q9UMQ6 739 aa18.96■□□□□ 0.63
SMPDL3A-202ENST00000487215 BTRCQ9Y297 605 aa18.96■□□□□ 0.63
SMPDL3A-202ENST00000487215 LOC285095A0A1B0GVY8 99 aa18.95■□□□□ 0.62
SMPDL3A-202ENST00000487215 OR6C74A6NCV1 312 aa18.95■□□□□ 0.62
SMPDL3A-202ENST00000487215 ZNF185O15231 689 aa18.95■□□□□ 0.62
SMPDL3A-202ENST00000487215 DDX3YO15523 660 aaKnown RBP18.95■□□□□ 0.62
SMPDL3A-202ENST00000487215 PTPN3P26045 913 aa18.95■□□□□ 0.62
SMPDL3A-202ENST00000487215 COL8A1P27658 744 aa18.95■□□□□ 0.62
SMPDL3A-202ENST00000487215 RORAP35398 523 aa18.95■□□□□ 0.62
SMPDL3A-202ENST00000487215 ITGA1P56199 1179 aa18.95■□□□□ 0.62
SMPDL3A-202ENST00000487215 TPM4P67936 248 aa18.95■□□□□ 0.62
SMPDL3A-202ENST00000487215 ABRQ12979 859 aa18.95■□□□□ 0.62
SMPDL3A-202ENST00000487215 PPP2R5EQ16537 467 aa18.95■□□□□ 0.62
SMPDL3A-202ENST00000487215 ARMC6Q6NXE6 501 aa18.95■□□□□ 0.62
SMPDL3A-202ENST00000487215 VSIG1Q86XK7 387 aa18.95■□□□□ 0.62
SMPDL3A-202ENST00000487215 HPS6Q86YV9 775 aa18.95■□□□□ 0.62
SMPDL3A-202ENST00000487215 RHOT1Q8IXI2 618 aa18.95■□□□□ 0.62
SMPDL3A-202ENST00000487215 BEND7Q8N7W2 519 aaPredicted RBP18.95■□□□□ 0.62
SMPDL3A-202ENST00000487215 CTNNBL1Q8WYA6 563 aaPredicted RBP18.95■□□□□ 0.62
SMPDL3A-202ENST00000487215 CPT1BQ92523 772 aa18.95■□□□□ 0.62
SMPDL3A-202ENST00000487215 PNPLA2Q96AD5 504 aa18.95■□□□□ 0.62
SMPDL3A-202ENST00000487215 TEKT5Q96M29 485 aa18.95■□□□□ 0.62
SMPDL3A-202ENST00000487215 C12orf66Q96MD2 445 aa18.95■□□□□ 0.62
SMPDL3A-202ENST00000487215 TLR10Q9BXR5 811 aa18.95■□□□□ 0.62
SMPDL3A-202ENST00000487215 MAK16Q9BXY0 300 aaKnown RBP18.95■□□□□ 0.62
SMPDL3A-202ENST00000487215 NLNQ9BYT8 704 aa18.95■□□□□ 0.62
SMPDL3A-202ENST00000487215 G3BP2Q9UN86 482 aaKnown RBP18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms