RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 B4GALNT1Q00973 533 aa6.94□□□□□ -1.3
SF3A3-206ENST00000487062 CREB5Q02930 508 aa6.94□□□□□ -1.3
SF3A3-206ENST00000487062 GSTM4Q03013 218 aa6.94□□□□□ -1.3
SF3A3-206ENST00000487062 DPTQ07507 201 aa6.94□□□□□ -1.3
SF3A3-206ENST00000487062 BNIP1Q12981 228 aa6.94□□□□□ -1.3
SF3A3-206ENST00000487062 PON2Q15165 354 aa6.94□□□□□ -1.3
SF3A3-206ENST00000487062 TBCCQ15814 346 aa6.94□□□□□ -1.3
SF3A3-206ENST00000487062 PFKFB4Q16877 469 aa6.94□□□□□ -1.3
SF3A3-206ENST00000487062 GALNTL6Q49A17 601 aa6.94□□□□□ -1.3
SF3A3-206ENST00000487062 HSF5Q4G112 596 aaPredicted RBP6.94□□□□□ -1.3
SF3A3-206ENST00000487062 FBXO43Q4G163 708 aa6.94□□□□□ -1.3
SF3A3-206ENST00000487062 TMEM196Q5HYL7 178 aa6.94□□□□□ -1.3
SF3A3-206ENST00000487062 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.94□□□□□ -1.3
SF3A3-206ENST00000487062 FRMD7Q6ZUT3 714 aa6.94□□□□□ -1.3
SF3A3-206ENST00000487062 NEK10Q6ZWH5 1172 aa6.94□□□□□ -1.3
SF3A3-206ENST00000487062 ACAD11Q709F0 780 aa6.94□□□□□ -1.3
SF3A3-206ENST00000487062 MTDHQ86UE4 582 aaKnown RBP6.94□□□□□ -1.3
SF3A3-206ENST00000487062 LSMEM2Q8N112 164 aa6.94□□□□□ -1.3
SF3A3-206ENST00000487062 SLC44A3Q8N4M1 653 aa6.94□□□□□ -1.3
SF3A3-206ENST00000487062 HDDC3Q8N4P3 179 aa6.94□□□□□ -1.3
SF3A3-206ENST00000487062 LKAAEAR1Q8TD35 194 aa6.94□□□□□ -1.3
SF3A3-206ENST00000487062 GANCQ8TET4 914 aa6.94□□□□□ -1.3
SF3A3-206ENST00000487062 FUBP1Q96AE4 644 aaKnown RBP6.94□□□□□ -1.3
SF3A3-206ENST00000487062 SKA1Q96BD8 255 aa6.94□□□□□ -1.3
SF3A3-206ENST00000487062 ZNF514Q96K75 400 aaPredicted RBP6.94□□□□□ -1.3
SF3A3-206ENST00000487062 TMEM237Q96Q45 408 aa6.94□□□□□ -1.3
SF3A3-206ENST00000487062 GABRG3Q99928 467 aa6.94□□□□□ -1.3
SF3A3-206ENST00000487062 TRIM54Q9BYV2 358 aa6.94□□□□□ -1.3
SF3A3-206ENST00000487062 MYLK2Q9H1R3 596 aa6.94□□□□□ -1.3
SF3A3-206ENST00000487062 EPHX3Q9H6B9 360 aa6.94□□□□□ -1.3
SF3A3-206ENST00000487062 KCNK12Q9HB15 430 aa6.94□□□□□ -1.3
SF3A3-206ENST00000487062 FBRSL1Q9HCM7 1045 aaKnown RBP6.94□□□□□ -1.3
SF3A3-206ENST00000487062 ZDHHC4Q9NPG8 344 aa6.94□□□□□ -1.3
SF3A3-206ENST00000487062 PFDN4Q9NQP4 134 aa6.94□□□□□ -1.3
SF3A3-206ENST00000487062 TMPRSS11EQ9UL52 423 aa6.94□□□□□ -1.3
SF3A3-206ENST00000487062 TRIM33Q9UPN9 1127 aa6.94□□□□□ -1.3
SF3A3-206ENST00000487062 SORCS3Q9UPU3 1222 aa6.94□□□□□ -1.3
SF3A3-206ENST00000487062 STK38LQ9Y2H1 464 aa6.94□□□□□ -1.3
SF3A3-206ENST00000487062 MTF2Q9Y483 593 aaPredicted RBP6.94□□□□□ -1.3
SF3A3-206ENST00000487062 OARD1Q9Y530 152 aa6.94□□□□□ -1.3
SF3A3-206ENST00000487062 TNPO3Q9Y5L0 923 aaKnown RBP6.94□□□□□ -1.3
SF3A3-206ENST00000487062 FADS3Q9Y5Q0 445 aa6.94□□□□□ -1.3
SF3A3-206ENST00000487062 ANKRD12Q6UB98 2062 aa6.93□□□□□ -1.3
SF3A3-206ENST00000487062 GOLGA8QA0A0J9YX86 632 aa6.93□□□□□ -1.3
SF3A3-206ENST00000487062 GOLGA8OA6NCC3 632 aa6.93□□□□□ -1.3
SF3A3-206ENST00000487062 GOLGA8NF8WBI6 632 aa6.93□□□□□ -1.3
SF3A3-206ENST00000487062 MATN2O00339 956 aa6.93□□□□□ -1.3
SF3A3-206ENST00000487062 PLK4O00444 970 aa6.93□□□□□ -1.3
SF3A3-206ENST00000487062 FCHO1O14526 889 aa6.93□□□□□ -1.3
SF3A3-206ENST00000487062 SLC16A5O15375 505 aa6.93□□□□□ -1.3
SF3A3-206ENST00000487062 SPINT1O43278 529 aa6.93□□□□□ -1.3
SF3A3-206ENST00000487062 NUAK1O60285 661 aa6.93□□□□□ -1.3
SF3A3-206ENST00000487062 DIAPH2O60879 1101 aa6.93□□□□□ -1.3
SF3A3-206ENST00000487062 RNASEH2AO75792 299 aaKnown RBP6.93□□□□□ -1.3
SF3A3-206ENST00000487062 PCDH8O95206 1070 aa6.93□□□□□ -1.3
SF3A3-206ENST00000487062 KLF8O95600 359 aaPredicted RBP6.93□□□□□ -1.3
SF3A3-206ENST00000487062 EGFP01133 1207 aa6.93□□□□□ -1.3
SF3A3-206ENST00000487062 C8GP07360 202 aa6.93□□□□□ -1.3
SF3A3-206ENST00000487062 CHRNGP07510 517 aa6.93□□□□□ -1.3
SF3A3-206ENST00000487062 SERPINA6P08185 405 aa6.93□□□□□ -1.3
SF3A3-206ENST00000487062 ENO2P09104 434 aaPredicted RBP6.93□□□□□ -1.3
SF3A3-206ENST00000487062 HIST1H2AGP0C0S8 130 aaPredicted RBP6.93□□□□□ -1.3
SF3A3-206ENST00000487062 MTHFD2P13995 350 aa6.93□□□□□ -1.3
SF3A3-206ENST00000487062 GM2AP17900 193 aa6.93□□□□□ -1.3
SF3A3-206ENST00000487062 VCLP18206 1134 aa6.93□□□□□ -1.3
SF3A3-206ENST00000487062 HIST1H2ADP20671 130 aa6.93□□□□□ -1.3
SF3A3-206ENST00000487062 CYP2A7P20853 494 aa6.93□□□□□ -1.3
SF3A3-206ENST00000487062 EEF1DP29692 281 aaKnown RBP6.93□□□□□ -1.3
SF3A3-206ENST00000487062 ARRB2P32121 409 aa6.93□□□□□ -1.3
SF3A3-206ENST00000487062 CCR7P32248 378 aa6.93□□□□□ -1.3
SF3A3-206ENST00000487062 DRD3P35462 400 aa6.93□□□□□ -1.3
SF3A3-206ENST00000487062 SCTRP47872 440 aa6.93□□□□□ -1.3
SF3A3-206ENST00000487062 IDH3AP50213 366 aa6.93□□□□□ -1.3
SF3A3-206ENST00000487062 CCR3P51677 355 aa6.93□□□□□ -1.3
SF3A3-206ENST00000487062 RPS14P62263 151 aaKnown RBP6.93□□□□□ -1.3
SF3A3-206ENST00000487062 TMEM115Q12893 351 aaPredicted RBP6.93□□□□□ -1.3
SF3A3-206ENST00000487062 SP140Q13342 867 aa6.93□□□□□ -1.3
SF3A3-206ENST00000487062 BOP1Q14137 746 aaKnown RBP6.93□□□□□ -1.3
SF3A3-206ENST00000487062 AGERQ15109 404 aa6.93□□□□□ -1.3
SF3A3-206ENST00000487062 TGFBIQ15582 683 aa6.93□□□□□ -1.3
SF3A3-206ENST00000487062 TTC31Q49AM3 519 aaPredicted RBP6.93□□□□□ -1.3
SF3A3-206ENST00000487062 SYTL3Q4VX76 610 aa6.93□□□□□ -1.3
SF3A3-206ENST00000487062 UNC50Q53HI1 259 aa6.93□□□□□ -1.3
SF3A3-206ENST00000487062 C2orf27AQ580R0 203 aa6.93□□□□□ -1.3
SF3A3-206ENST00000487062 ACSBG2Q5FVE4 666 aa6.93□□□□□ -1.3
SF3A3-206ENST00000487062 CDKL4Q5MAI5 379 aa6.93□□□□□ -1.3
SF3A3-206ENST00000487062 EOGTQ5NDL2 527 aa6.93□□□□□ -1.3
SF3A3-206ENST00000487062 SH2D4BQ5SQS7 431 aa6.93□□□□□ -1.3
SF3A3-206ENST00000487062 PIP5KL1Q5T9C9 394 aa6.93□□□□□ -1.3
SF3A3-206ENST00000487062 METTL21CQ5VZV1 264 aa6.93□□□□□ -1.3
SF3A3-206ENST00000487062 FAM91A1Q658Y4 838 aa6.93□□□□□ -1.3
SF3A3-206ENST00000487062 RAET1GQ6H3X3 334 aa6.93□□□□□ -1.3
SF3A3-206ENST00000487062 SULT1C3Q6IMI6 304 aa6.93□□□□□ -1.3
SF3A3-206ENST00000487062 TTC23LQ6PF05 361 aa6.93□□□□□ -1.3
SF3A3-206ENST00000487062 TMEM220Q6QAJ8 160 aa6.93□□□□□ -1.3
SF3A3-206ENST00000487062 EPGNQ6UW88 154 aa6.93□□□□□ -1.3
SF3A3-206ENST00000487062 DET1Q7L5Y6 550 aa6.93□□□□□ -1.3
SF3A3-206ENST00000487062 EFL1Q7Z2Z2 1120 aaKnown RBP6.93□□□□□ -1.3
SF3A3-206ENST00000487062 CLNKQ7Z7G1 428 aa6.93□□□□□ -1.3
SF3A3-206ENST00000487062 CUZD1Q86UP6 607 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 756.2 ms