RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 GIMAP2Q9UG22 337 aa20.05■□□□□ 0.8
HPS3-206ENST00000486530 PTBP2Q9UKA9 531 aaKnown RBP20.05■□□□□ 0.8
HPS3-206ENST00000486530 PACSIN3Q9UKS6 424 aa20.05■□□□□ 0.8
HPS3-206ENST00000486530 EIF3FO00303 357 aaPredicted RBP20.04■□□□□ 0.8
HPS3-206ENST00000486530 OR4F21O95013 312 aa20.04■□□□□ 0.8
HPS3-206ENST00000486530 ASLP04424 464 aa20.04■□□□□ 0.8
HPS3-206ENST00000486530 SRPRAP08240 638 aaKnown RBP20.04■□□□□ 0.8
HPS3-206ENST00000486530 VCLP18206 1134 aa20.04■□□□□ 0.8
HPS3-206ENST00000486530 XRCC1P18887 633 aaPredicted RBP20.04■□□□□ 0.8
HPS3-206ENST00000486530 GTF2H2Q13888 395 aa20.04■□□□□ 0.8
HPS3-206ENST00000486530 FLOT2Q14254 428 aa20.04■□□□□ 0.8
HPS3-206ENST00000486530 LRRC73Q5JTD7 316 aa20.04■□□□□ 0.8
HPS3-206ENST00000486530 GTF2H2CQ6P1K8 395 aa20.04■□□□□ 0.8
HPS3-206ENST00000486530 FUNDC1Q8IVP5 155 aa20.04■□□□□ 0.8
HPS3-206ENST00000486530 HIPK4Q8NE63 616 aa20.04■□□□□ 0.8
HPS3-206ENST00000486530 OR52B6Q8NGF0 335 aa20.04■□□□□ 0.8
HPS3-206ENST00000486530 WFIKKN2Q8TEU8 576 aa20.04■□□□□ 0.8
HPS3-206ENST00000486530 UBTD2Q8WUN7 234 aa20.04■□□□□ 0.8
HPS3-206ENST00000486530 NOL11Q9H8H0 719 aaKnown RBP20.04■□□□□ 0.8
HPS3-206ENST00000486530 RDH14Q9HBH5 336 aa20.04■□□□□ 0.8
HPS3-206ENST00000486530 DUS2Q9NX74 493 aaKnown RBP20.04■□□□□ 0.8
HPS3-206ENST00000486530 ADAMTS6Q9UKP5 1117 aa20.04■□□□□ 0.8
HPS3-206ENST00000486530 TTC34A8MYJ7 566 aa20.03■□□□□ 0.8
HPS3-206ENST00000486530 TRIM38O00635 465 aa20.03■□□□□ 0.8
HPS3-206ENST00000486530 LEFTY1O75610 366 aa20.03■□□□□ 0.8
HPS3-206ENST00000486530 CYP17A1P05093 508 aa20.03■□□□□ 0.8
HPS3-206ENST00000486530 OR56A5P0C7T3 313 aa20.03■□□□□ 0.8
HPS3-206ENST00000486530 ADH5P11766 374 aa20.03■□□□□ 0.8
HPS3-206ENST00000486530 WEE1P30291 646 aa20.03■□□□□ 0.8
HPS3-206ENST00000486530 DGKGP49619 791 aa20.03■□□□□ 0.8
HPS3-206ENST00000486530 DCDC1P59894 354 aa20.03■□□□□ 0.8
HPS3-206ENST00000486530 B4GALNT1Q00973 533 aa20.03■□□□□ 0.8
HPS3-206ENST00000486530 DUSP6Q16828 381 aa20.03■□□□□ 0.8
HPS3-206ENST00000486530 SULT1C3Q6IMI6 304 aa20.03■□□□□ 0.8
HPS3-206ENST00000486530 METTL2BQ6P1Q9 378 aaKnown RBP20.03■□□□□ 0.8
HPS3-206ENST00000486530 RFLNAQ6ZTI6 216 aa20.03■□□□□ 0.8
HPS3-206ENST00000486530 SNX31Q8N9S9 440 aa20.03■□□□□ 0.8
HPS3-206ENST00000486530 PCYOX1LQ8NBM8 494 aa20.03■□□□□ 0.8
HPS3-206ENST00000486530 SORCS1Q8WY21 1168 aa20.03■□□□□ 0.8
HPS3-206ENST00000486530 MYLIPQ8WY64 445 aa20.03■□□□□ 0.8
HPS3-206ENST00000486530 ROPN1LQ96C74 230 aa20.03■□□□□ 0.8
HPS3-206ENST00000486530 APOL5Q9BWW9 433 aa20.03■□□□□ 0.8
HPS3-206ENST00000486530 NSUN3Q9H649 340 aaKnown RBP20.03■□□□□ 0.8
HPS3-206ENST00000486530 SMOXQ9NWM0 555 aa20.03■□□□□ 0.8
HPS3-206ENST00000486530 UPK3BL1B0FP48 263 aa20.03■□□□□ 0.8
HPS3-206ENST00000486530 UPK3BL2E5RIL1 263 aa20.03■□□□□ 0.8
HPS3-206ENST00000486530 HOXC11O43248 304 aaPredicted RBP20.03■□□□□ 0.8
HPS3-206ENST00000486530 ADH1CP00326 375 aa20.03■□□□□ 0.8
HPS3-206ENST00000486530 OTCP00480 354 aa20.03■□□□□ 0.8
HPS3-206ENST00000486530 ERVPABLB-1P60509 514 aa20.03■□□□□ 0.8
HPS3-206ENST00000486530 GRIK2Q13002 908 aa20.03■□□□□ 0.8
HPS3-206ENST00000486530 RPS6KA2Q15349 733 aa20.03■□□□□ 0.8
HPS3-206ENST00000486530 CDYL2Q8N8U2 506 aa20.03■□□□□ 0.8
HPS3-206ENST00000486530 VN1R2Q8NFZ6 395 aa20.03■□□□□ 0.8
HPS3-206ENST00000486530 OSCP1Q8WVF1 389 aa20.03■□□□□ 0.8
HPS3-206ENST00000486530 SMG7Q92540 1137 aaKnown RBP20.03■□□□□ 0.8
HPS3-206ENST00000486530 LRIG1Q96JA1 1093 aa20.03■□□□□ 0.8
HPS3-206ENST00000486530 EGFL8Q99944 293 aa20.03■□□□□ 0.8
HPS3-206ENST00000486530 NKX2-4Q9H2Z4 354 aa20.03■□□□□ 0.8
HPS3-206ENST00000486530 SPAG4Q9NPE6 437 aa20.03■□□□□ 0.8
HPS3-206ENST00000486530 ADA2Q9NZK5 511 aa20.03■□□□□ 0.8
HPS3-206ENST00000486530 IL36AQ9UHA7 158 aa20.03■□□□□ 0.8
HPS3-206ENST00000486530 ST14Q9Y5Y6 855 aa20.03■□□□□ 0.8
HPS3-206ENST00000486530 ATG2AQ2TAZ0 1938 aa20.02■□□□□ 0.8
HPS3-206ENST00000486530 NR5A2O00482 541 aa20.02■□□□□ 0.8
HPS3-206ENST00000486530 GUCA1CO95843 209 aa20.02■□□□□ 0.8
HPS3-206ENST00000486530 CISD3P0C7P0 127 aa20.02■□□□□ 0.8
HPS3-206ENST00000486530 NRIP1P48552 1158 aa20.02■□□□□ 0.8
HPS3-206ENST00000486530 KCNC3Q14003 757 aa20.02■□□□□ 0.8
HPS3-206ENST00000486530 PHKG1Q16816 387 aa20.02■□□□□ 0.8
HPS3-206ENST00000486530 C18orf21Q32NC0 220 aaPredicted RBP20.02■□□□□ 0.8
HPS3-206ENST00000486530 ARSIQ5FYB1 569 aa20.02■□□□□ 0.8
HPS3-206ENST00000486530 LETMD1Q6P1Q0 360 aa20.02■□□□□ 0.8
HPS3-206ENST00000486530 DLG3Q92796 817 aa20.02■□□□□ 0.8
HPS3-206ENST00000486530 SPATA16Q9BXB7 569 aa20.02■□□□□ 0.8
HPS3-206ENST00000486530 RAD18Q9NS91 495 aa20.02■□□□□ 0.8
HPS3-206ENST00000486530 AIG1Q9NVV5 245 aa20.02■□□□□ 0.8
HPS3-206ENST00000486530 WWOXQ9NZC7 414 aa20.02■□□□□ 0.8
HPS3-206ENST00000486530 SUCOQ9UBS9 1254 aaKnown RBP20.02■□□□□ 0.8
HPS3-206ENST00000486530 CROTQ9UKG9 612 aa20.02■□□□□ 0.8
HPS3-206ENST00000486530 NDUFAF1Q9Y375 327 aa20.02■□□□□ 0.8
HPS3-206ENST00000486530 GPR45Q9Y5Y3 372 aa20.02■□□□□ 0.8
HPS3-206ENST00000486530 OR7A17O14581 309 aa20.01■□□□□ 0.79
HPS3-206ENST00000486530 TAPBPO15533 448 aa20.01■□□□□ 0.79
HPS3-206ENST00000486530 BCAS2O75934 225 aaPredicted RBP20.01■□□□□ 0.79
HPS3-206ENST00000486530 ARL1P40616 181 aaPredicted RBP20.01■□□□□ 0.79
HPS3-206ENST00000486530 HSPA7P48741 367 aa20.01■□□□□ 0.79
HPS3-206ENST00000486530 C8orf82Q6P1X6 216 aaPredicted RBP20.01■□□□□ 0.79
HPS3-206ENST00000486530 HCAR2Q8TDS4 363 aa20.01■□□□□ 0.79
HPS3-206ENST00000486530 LRRC3BQ96PB8 259 aa20.01■□□□□ 0.79
HPS3-206ENST00000486530 ZNF184Q99676 751 aaPredicted RBP20.01■□□□□ 0.79
HPS3-206ENST00000486530 LMAN2LQ9H0V9 348 aa20.01■□□□□ 0.79
HPS3-206ENST00000486530 PCDH12Q9NPG4 1184 aa20.01■□□□□ 0.79
HPS3-206ENST00000486530 ELOVL2Q9NXB9 296 aa20.01■□□□□ 0.79
HPS3-206ENST00000486530 NFKBIL1Q9UBC1 381 aaPredicted RBP20.01■□□□□ 0.79
HPS3-206ENST00000486530 DKK3Q9UBP4 350 aa20.01■□□□□ 0.79
HPS3-206ENST00000486530 CD84Q9UIB8 345 aa20.01■□□□□ 0.79
HPS3-206ENST00000486530 PRRC2BQ5JSZ5 2229 aaKnown RBP20.01■□□□□ 0.79
HPS3-206ENST00000486530 C2orf16Q68DN1 1984 aa20.01■□□□□ 0.79
HPS3-206ENST00000486530 EPOPA6NHQ4 379 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms