RNA–Protein interactions for RNA: ENST00000486515.1

UBR4-214, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-214ENST00000486515 CARS2Q9HA77 564 aaKnown RBP6.86□□□□□ -1.31
UBR4-214ENST00000486515 GPAMQ9HCL2 828 aa6.86□□□□□ -1.31
UBR4-214ENST00000486515 MBNL1Q9NR56 388 aaKnown RBP6.86□□□□□ -1.31
UBR4-214ENST00000486515 SEMA4GQ9NTN9 838 aa6.86□□□□□ -1.31
UBR4-214ENST00000486515 TMEM98Q9Y2Y6 226 aa6.86□□□□□ -1.31
UBR4-214ENST00000486515 DNMT3AQ9Y6K1 912 aaPredicted RBP6.86□□□□□ -1.31
UBR4-214ENST00000486515 ADAMTS20P59510 1910 aa6.86□□□□□ -1.31
UBR4-214ENST00000486515 PRSS38A1L453 326 aa6.85□□□□□ -1.31
UBR4-214ENST00000486515 POM121BA6NF01 834 aa6.85□□□□□ -1.31
UBR4-214ENST00000486515 ENO4A6NNW6 628 aa6.85□□□□□ -1.31
UBR4-214ENST00000486515 AGAP14A8MT82 685 aa6.85□□□□□ -1.31
UBR4-214ENST00000486515 CXorf49A8MYA2 514 aaPredicted RBP6.85□□□□□ -1.31
UBR4-214ENST00000486515 TRIM49D1C9J1S8 452 aa6.85□□□□□ -1.31
UBR4-214ENST00000486515 K7ESM1 405 aa6.85□□□□□ -1.31
UBR4-214ENST00000486515 COPEO14579 308 aa6.85□□□□□ -1.31
UBR4-214ENST00000486515 LIN7AO14910 233 aaPredicted RBP6.85□□□□□ -1.31
UBR4-214ENST00000486515 NUAK1O60285 661 aa6.85□□□□□ -1.31
UBR4-214ENST00000486515 OR1I1O60431 355 aa6.85□□□□□ -1.31
UBR4-214ENST00000486515 DFNA5O60443 496 aa6.85□□□□□ -1.31
UBR4-214ENST00000486515 LRP3O75074 770 aa6.85□□□□□ -1.31
UBR4-214ENST00000486515 PIAS1O75925 651 aa6.85□□□□□ -1.31
UBR4-214ENST00000486515 S100BP04271 92 aaPredicted RBP6.85□□□□□ -1.31
UBR4-214ENST00000486515 RPN2P04844 631 aa6.85□□□□□ -1.31
UBR4-214ENST00000486515 HIST1H2AGP0C0S8 130 aaPredicted RBP6.85□□□□□ -1.31
UBR4-214ENST00000486515 NEFHP12036 1026 aa6.85□□□□□ -1.31
UBR4-214ENST00000486515 SLC2A4P14672 509 aa6.85□□□□□ -1.31
UBR4-214ENST00000486515 ITGB6P18564 788 aa6.85□□□□□ -1.31
UBR4-214ENST00000486515 HIST1H2ADP20671 130 aa6.85□□□□□ -1.31
UBR4-214ENST00000486515 BCKDHBP21953 392 aa6.85□□□□□ -1.31
UBR4-214ENST00000486515 MAOBP27338 520 aa6.85□□□□□ -1.31
UBR4-214ENST00000486515 ARNTP27540 789 aa6.85□□□□□ -1.31
UBR4-214ENST00000486515 HOXD12P35452 270 aa6.85□□□□□ -1.31
UBR4-214ENST00000486515 CCR10P46092 362 aa6.85□□□□□ -1.31
UBR4-214ENST00000486515 GNPDA1P46926 289 aa6.85□□□□□ -1.31
UBR4-214ENST00000486515 PPM1FP49593 454 aaPredicted RBP6.85□□□□□ -1.31
UBR4-214ENST00000486515 IL2P60568 153 aa6.85□□□□□ -1.31
UBR4-214ENST00000486515 PFN3P60673 137 aa6.85□□□□□ -1.31
UBR4-214ENST00000486515 HNRNPKP61978 463 aaKnown RBP eCLIP6.85□□□□□ -1.31
UBR4-214ENST00000486515 ZNF844Q08AG5 666 aa6.85□□□□□ -1.31
UBR4-214ENST00000486515 LRP8Q14114 963 aa6.85□□□□□ -1.31
UBR4-214ENST00000486515 BOP1Q14137 746 aaKnown RBP6.85□□□□□ -1.31
UBR4-214ENST00000486515 FGL2Q14314 439 aa6.85□□□□□ -1.31
UBR4-214ENST00000486515 RASA2Q15283 850 aa6.85□□□□□ -1.31
UBR4-214ENST00000486515 PLK5Q496M5 336 aa6.85□□□□□ -1.31
UBR4-214ENST00000486515 HECTD2Q5U5R9 776 aa6.85□□□□□ -1.31
UBR4-214ENST00000486515 AGAP9Q5VTM2 703 aa6.85□□□□□ -1.31
UBR4-214ENST00000486515 CRTC3Q6UUV7 619 aa6.85□□□□□ -1.31
UBR4-214ENST00000486515 IL27RAQ6UWB1 636 aa6.85□□□□□ -1.31
UBR4-214ENST00000486515 GCNT7Q6ZNI0 430 aa6.85□□□□□ -1.31
UBR4-214ENST00000486515 FRA10AC1Q70Z53 315 aa6.85□□□□□ -1.31
UBR4-214ENST00000486515 CHST15Q7LFX5 561 aaPredicted RBP6.85□□□□□ -1.31
UBR4-214ENST00000486515 ABI3BPQ7Z7G0 1075 aa6.85□□□□□ -1.31
UBR4-214ENST00000486515 ADGRG6Q86SQ4 1221 aa6.85□□□□□ -1.31
UBR4-214ENST00000486515 TRIM74Q86UV6 250 aa6.85□□□□□ -1.31
UBR4-214ENST00000486515 AMZ2Q86W34 360 aa6.85□□□□□ -1.31
UBR4-214ENST00000486515 ZC3HC1Q86WB0 502 aaKnown RBP6.85□□□□□ -1.31
UBR4-214ENST00000486515 SYT12Q8IV01 421 aa6.85□□□□□ -1.31
UBR4-214ENST00000486515 HID1Q8IV36 788 aa6.85□□□□□ -1.31
UBR4-214ENST00000486515 PIANPQ8IYJ0 282 aa6.85□□□□□ -1.31
UBR4-214ENST00000486515 IQCKQ8N0W5 287 aa6.85□□□□□ -1.31
UBR4-214ENST00000486515 RAB42Q8N4Z0 105 aa6.85□□□□□ -1.31
UBR4-214ENST00000486515 CLDN19Q8N6F1 224 aa6.85□□□□□ -1.31
UBR4-214ENST00000486515 CCDC63Q8NA47 563 aa6.85□□□□□ -1.31
UBR4-214ENST00000486515 MAGEC3Q8TD91 643 aa6.85□□□□□ -1.31
UBR4-214ENST00000486515 ACMSDQ8TDX5 336 aa6.85□□□□□ -1.31
UBR4-214ENST00000486515 DCAKDQ8WVC6 231 aa6.85□□□□□ -1.31
UBR4-214ENST00000486515 DNASE2BQ8WZ79 361 aa6.85□□□□□ -1.31
UBR4-214ENST00000486515 LPGAT1Q92604 370 aa6.85□□□□□ -1.31
UBR4-214ENST00000486515 FUBP1Q96AE4 644 aaKnown RBP6.85□□□□□ -1.31
UBR4-214ENST00000486515 SGF29Q96ES7 293 aa6.85□□□□□ -1.31
UBR4-214ENST00000486515 PGM2Q96G03 612 aa6.85□□□□□ -1.31
UBR4-214ENST00000486515 LOXL4Q96JB6 756 aa6.85□□□□□ -1.31
UBR4-214ENST00000486515 SCYL1Q96KG9 808 aa6.85□□□□□ -1.31
UBR4-214ENST00000486515 HIST1H2AHQ96KK5 128 aa6.85□□□□□ -1.31
UBR4-214ENST00000486515 SLC6A18Q96N87 628 aa6.85□□□□□ -1.31
UBR4-214ENST00000486515 OR2M4Q96R27 311 aa6.85□□□□□ -1.31
UBR4-214ENST00000486515 NDNQ99608 321 aa6.85□□□□□ -1.31
UBR4-214ENST00000486515 KLF6Q99612 283 aaPredicted RBP6.85□□□□□ -1.31
UBR4-214ENST00000486515 HIST1H2AJQ99878 128 aa6.85□□□□□ -1.31
UBR4-214ENST00000486515 WDR83Q9BRX9 315 aaKnown RBP6.85□□□□□ -1.31
UBR4-214ENST00000486515 AARSD1Q9BTE6 412 aaKnown RBP6.85□□□□□ -1.31
UBR4-214ENST00000486515 H2AFJQ9BTM1 129 aa6.85□□□□□ -1.31
UBR4-214ENST00000486515 SCNM1Q9BWG6 230 aa6.85□□□□□ -1.31
UBR4-214ENST00000486515 BOCQ9BWV1 1114 aa6.85□□□□□ -1.31
UBR4-214ENST00000486515 GSDMCQ9BYG8 508 aa6.85□□□□□ -1.31
UBR4-214ENST00000486515 ZDHHC5Q9C0B5 715 aa6.85□□□□□ -1.31
UBR4-214ENST00000486515 STN1Q9H668 368 aaKnown RBP6.85□□□□□ -1.31
UBR4-214ENST00000486515 POPDC3Q9HBV1 291 aa6.85□□□□□ -1.31
UBR4-214ENST00000486515 CYP4F12Q9HCS2 524 aa6.85□□□□□ -1.31
UBR4-214ENST00000486515 TM9SF3Q9HD45 589 aa6.85□□□□□ -1.31
UBR4-214ENST00000486515 KCNK9Q9NPC2 374 aa6.85□□□□□ -1.31
UBR4-214ENST00000486515 MED4Q9NPJ6 270 aa6.85□□□□□ -1.31
UBR4-214ENST00000486515 LATS2Q9NRM7 1088 aa6.85□□□□□ -1.31
UBR4-214ENST00000486515 DNAJC28Q9NX36 388 aa6.85□□□□□ -1.31
UBR4-214ENST00000486515 MARCH4Q9P2E8 410 aaPredicted RBP6.85□□□□□ -1.31
UBR4-214ENST00000486515 ATXN10Q9UBB4 475 aa6.85□□□□□ -1.31
UBR4-214ENST00000486515 FAM8A1Q9UBU6 413 aa6.85□□□□□ -1.31
UBR4-214ENST00000486515 MBD1Q9UIS9 605 aaPredicted RBP6.85□□□□□ -1.31
UBR4-214ENST00000486515 ANKRD6Q9Y2G4 727 aa6.85□□□□□ -1.31
UBR4-214ENST00000486515 ACOT9Q9Y305 439 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms