RNA–Protein interactions for RNA: ENST00000476791.1

SPTLC3-205, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

TSL 1 (best)

Gene SPTLC3, Length 2,480 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-205ENST00000476791 ACTRT1Q8TDG2 376 aa5.89□□□□□ -1.47
SPTLC3-205ENST00000476791 PRPF31Q8WWY3 499 aaKnown RBP5.89□□□□□ -1.47
SPTLC3-205ENST00000476791 DIO2Q92813 273 aa5.89□□□□□ -1.47
SPTLC3-205ENST00000476791 MTERF3Q96E29 417 aa5.89□□□□□ -1.47
SPTLC3-205ENST00000476791 ALG14Q96F25 216 aa5.89□□□□□ -1.47
SPTLC3-205ENST00000476791 DCAF5Q96JK2 942 aa5.89□□□□□ -1.47
SPTLC3-205ENST00000476791 SSX3Q99909 188 aa5.89□□□□□ -1.47
SPTLC3-205ENST00000476791 TUBGCP2Q9BSJ2 902 aa5.89□□□□□ -1.47
SPTLC3-205ENST00000476791 IFT27Q9BW83 186 aa5.89□□□□□ -1.47
SPTLC3-205ENST00000476791 EXO5Q9H790 373 aa5.89□□□□□ -1.47
SPTLC3-205ENST00000476791 C14orf93Q9H972 538 aaKnown RBP5.89□□□□□ -1.47
SPTLC3-205ENST00000476791 ELP3Q9H9T3 547 aa5.89□□□□□ -1.47
SPTLC3-205ENST00000476791 RXFP1Q9HBX9 757 aa5.89□□□□□ -1.47
SPTLC3-205ENST00000476791 MAT2BQ9NZL9 334 aa5.89□□□□□ -1.47
SPTLC3-205ENST00000476791 CD274Q9NZQ7 290 aa5.89□□□□□ -1.47
SPTLC3-205ENST00000476791 MPP6Q9NZW5 540 aa5.89□□□□□ -1.47
SPTLC3-205ENST00000476791 NDOR1Q9UHB4 597 aa5.89□□□□□ -1.47
SPTLC3-205ENST00000476791 C3orf18Q9UK00 162 aa5.89□□□□□ -1.47
SPTLC3-205ENST00000476791 COPS3Q9UNS2 423 aa5.89□□□□□ -1.47
SPTLC3-205ENST00000476791 PTGDR2Q9Y5Y4 395 aa5.89□□□□□ -1.47
SPTLC3-205ENST00000476791 CCDC144AA2RUR9 1427 aa5.89□□□□□ -1.47
SPTLC3-205ENST00000476791 PRAG1Q86YV5 1406 aa5.89□□□□□ -1.47
SPTLC3-205ENST00000476791 SALL3Q9BXA9 1300 aa5.88□□□□□ -1.47
SPTLC3-205ENST00000476791 FAM172BPA6NC97 362 aa5.88□□□□□ -1.47
SPTLC3-205ENST00000476791 METTL21EPA6NDL7 271 aa5.88□□□□□ -1.47
SPTLC3-205ENST00000476791 NPIPB8E9PQR5 432 aa5.88□□□□□ -1.47
SPTLC3-205ENST00000476791 CES2O00748 559 aa5.88□□□□□ -1.47
SPTLC3-205ENST00000476791 LRRTM2O43300 516 aa5.88□□□□□ -1.47
SPTLC3-205ENST00000476791 RECQL5O94762 991 aaPredicted RBP5.88□□□□□ -1.47
SPTLC3-205ENST00000476791 IGHV2-70P01814 119 aa5.88□□□□□ -1.47
SPTLC3-205ENST00000476791 TUBBP07437 444 aa5.88□□□□□ -1.47
SPTLC3-205ENST00000476791 ADRB3P13945 408 aa5.88□□□□□ -1.47
SPTLC3-205ENST00000476791 AKR1A1P14550 325 aa5.88□□□□□ -1.47
SPTLC3-205ENST00000476791 NQO2P16083 231 aa5.88□□□□□ -1.47
SPTLC3-205ENST00000476791 ERCC2P18074 760 aa5.88□□□□□ -1.47
SPTLC3-205ENST00000476791 GRNP28799 593 aaKnown RBP5.88□□□□□ -1.47
SPTLC3-205ENST00000476791 NDST2P52849 883 aa5.88□□□□□ -1.47
SPTLC3-205ENST00000476791 GALNT2Q10471 571 aa5.88□□□□□ -1.47
SPTLC3-205ENST00000476791 FSTL1Q12841 308 aa5.88□□□□□ -1.47
SPTLC3-205ENST00000476791 KLF1Q13351 362 aaPredicted RBP5.88□□□□□ -1.47
SPTLC3-205ENST00000476791 DUSP7Q16829 419 aa5.88□□□□□ -1.47
SPTLC3-205ENST00000476791 KIZQ2M2Z5 673 aa5.88□□□□□ -1.47
SPTLC3-205ENST00000476791 DUSP28Q4G0W2 176 aa5.88□□□□□ -1.47
SPTLC3-205ENST00000476791 SEZ6Q53EL9 994 aa5.88□□□□□ -1.47
SPTLC3-205ENST00000476791 ZNF484Q5JVG2 852 aa5.88□□□□□ -1.47
SPTLC3-205ENST00000476791 CELF3Q5SZQ8 465 aaKnown RBP5.88□□□□□ -1.47
SPTLC3-205ENST00000476791 UBAP2Q5T6F2 1119 aaKnown RBP5.88□□□□□ -1.47
SPTLC3-205ENST00000476791 ERMARDQ5T6L9 678 aa5.88□□□□□ -1.47
SPTLC3-205ENST00000476791 ATPAF1Q5TC12 328 aaPredicted RBP5.88□□□□□ -1.47
SPTLC3-205ENST00000476791 LIPJQ5W064 366 aa5.88□□□□□ -1.47
SPTLC3-205ENST00000476791 ZNF470Q6ECI4 717 aa5.88□□□□□ -1.47
SPTLC3-205ENST00000476791 GPAT2Q6NUI2 795 aa5.88□□□□□ -1.47
SPTLC3-205ENST00000476791 PGBD2Q6P3X8 592 aa5.88□□□□□ -1.47
SPTLC3-205ENST00000476791 NPSR1Q6W5P4 371 aa5.88□□□□□ -1.47
SPTLC3-205ENST00000476791 BIVMQ86UB2 503 aa5.88□□□□□ -1.47
SPTLC3-205ENST00000476791 PLCZ1Q86YW0 608 aa5.88□□□□□ -1.47
SPTLC3-205ENST00000476791 MISPQ8IVT2 679 aa5.88□□□□□ -1.47
SPTLC3-205ENST00000476791 DHX40Q8IX18 779 aaKnown RBP5.88□□□□□ -1.47
SPTLC3-205ENST00000476791 CENPSQ8N2Z9 138 aa5.88□□□□□ -1.47
SPTLC3-205ENST00000476791 OR2L3Q8NG85 312 aa5.88□□□□□ -1.47
SPTLC3-205ENST00000476791 STT3BQ8TCJ2 826 aa5.88□□□□□ -1.47
SPTLC3-205ENST00000476791 GLG1Q92896 1179 aa5.88□□□□□ -1.47
SPTLC3-205ENST00000476791 TESCQ96BS2 214 aa5.88□□□□□ -1.47
SPTLC3-205ENST00000476791 MYO19Q96H55 970 aa5.88□□□□□ -1.47
SPTLC3-205ENST00000476791 TMEM41AQ96HV5 264 aa5.88□□□□□ -1.47
SPTLC3-205ENST00000476791 PNMA5Q96PV4 448 aa5.88□□□□□ -1.47
SPTLC3-205ENST00000476791 CITED4Q96RK1 184 aa5.88□□□□□ -1.47
SPTLC3-205ENST00000476791 DIRC2Q96SL1 478 aa5.88□□□□□ -1.47
SPTLC3-205ENST00000476791 HSD17B14Q9BPX1 270 aa5.88□□□□□ -1.47
SPTLC3-205ENST00000476791 TRAF4Q9BUZ4 470 aaPredicted RBP5.88□□□□□ -1.47
SPTLC3-205ENST00000476791 MS4A5Q9H3V2 200 aa5.88□□□□□ -1.47
SPTLC3-205ENST00000476791 MLXIPQ9HAP2 919 aa5.88□□□□□ -1.47
SPTLC3-205ENST00000476791 ARHGEF4Q9NR80 690 aa5.88□□□□□ -1.47
SPTLC3-205ENST00000476791 SLCO1C1Q9NYB5 712 aa5.88□□□□□ -1.47
SPTLC3-205ENST00000476791 NCDNQ9UBB6 729 aa5.88□□□□□ -1.47
SPTLC3-205ENST00000476791 NDRG2Q9UN36 371 aaKnown RBP5.88□□□□□ -1.47
SPTLC3-205ENST00000476791 SORCS3Q9UPU3 1222 aa5.88□□□□□ -1.47
SPTLC3-205ENST00000476791 MMACHCQ9Y4U1 282 aa5.88□□□□□ -1.47
SPTLC3-205ENST00000476791 MRPS18BQ9Y676 258 aaKnown RBP5.88□□□□□ -1.47
SPTLC3-205ENST00000476791 MAU2Q9Y6X3 613 aa5.88□□□□□ -1.47
SPTLC3-205ENST00000476791 DHX57Q6P158 1386 aaKnown RBP5.88□□□□□ -1.47
SPTLC3-205ENST00000476791 SPATA31D1Q6ZQQ2 1576 aa5.88□□□□□ -1.47
SPTLC3-205ENST00000476791 TEX13CA0A0J9YWL9 993 aa5.88□□□□□ -1.47
SPTLC3-205ENST00000476791 TCP11X1B4DZS4 312 aa5.88□□□□□ -1.47
SPTLC3-205ENST00000476791 HAS3O00219 553 aa5.88□□□□□ -1.47
SPTLC3-205ENST00000476791 PLD2O14939 933 aa5.88□□□□□ -1.47
SPTLC3-205ENST00000476791 DENRO43583 198 aaKnown RBP5.88□□□□□ -1.47
SPTLC3-205ENST00000476791 PRAMEF2O60811 474 aa5.88□□□□□ -1.47
SPTLC3-205ENST00000476791 MBD3O95983 291 aa5.88□□□□□ -1.47
SPTLC3-205ENST00000476791 LDLRP01130 860 aa5.88□□□□□ -1.47
SPTLC3-205ENST00000476791 CRABP1P29762 137 aa5.88□□□□□ -1.47
SPTLC3-205ENST00000476791 TECP42680 631 aa5.88□□□□□ -1.47
SPTLC3-205ENST00000476791 PXNP49023 591 aaPredicted RBP5.88□□□□□ -1.47
SPTLC3-205ENST00000476791 NPY4RP50391 375 aa5.88□□□□□ -1.47
SPTLC3-205ENST00000476791 PGDP52209 483 aa5.88□□□□□ -1.47
SPTLC3-205ENST00000476791 KPNA2P52292 529 aaKnown RBP5.88□□□□□ -1.47
SPTLC3-205ENST00000476791 PSMD4P55036 377 aaKnown RBP5.88□□□□□ -1.47
SPTLC3-205ENST00000476791 PER3P56645 1201 aa5.88□□□□□ -1.47
SPTLC3-205ENST00000476791 CXCR4P61073 352 aa5.88□□□□□ -1.47
SPTLC3-205ENST00000476791 YPEL5P62699 121 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms