RNA–Protein interactions for RNA: ENST00000476139.5

TVP23B-202, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 1 (best) BASIC

Gene TVP23B, Length 2,989 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-202ENST00000476139 LRRC58Q96CX6 371 aa16.4■□□□□ 0.22
TVP23B-202ENST00000476139 PDLIM5Q96HC4 596 aaKnown RBP16.4■□□□□ 0.22
TVP23B-202ENST00000476139 CRISPLD2Q9H0B8 497 aa16.4■□□□□ 0.22
TVP23B-202ENST00000476139 CMTM6Q9NX76 183 aa16.4■□□□□ 0.22
TVP23B-202ENST00000476139 SLCO3A1Q9UIG8 710 aa16.4■□□□□ 0.22
TVP23B-202ENST00000476139 SLC4A7Q9Y6M7 1214 aa16.4■□□□□ 0.22
TVP23B-202ENST00000476139 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.39■□□□□ 0.21
TVP23B-202ENST00000476139 CHEK2O96017 543 aa16.39■□□□□ 0.21
TVP23B-202ENST00000476139 C8BP07358 591 aa16.39■□□□□ 0.21
TVP23B-202ENST00000476139 CTSAP10619 480 aa16.39■□□□□ 0.21
TVP23B-202ENST00000476139 SLC6A2P23975 617 aa16.39■□□□□ 0.21
TVP23B-202ENST00000476139 C6orf136Q5SQH8 315 aa16.39■□□□□ 0.21
TVP23B-202ENST00000476139 LILRA6Q6PI73 481 aa16.39■□□□□ 0.21
TVP23B-202ENST00000476139 CRTC1Q6UUV9 634 aa16.39■□□□□ 0.21
TVP23B-202ENST00000476139 RBFAQ8N0V3 343 aa16.39■□□□□ 0.21
TVP23B-202ENST00000476139 FNDC5Q8NAU1 212 aa16.39■□□□□ 0.21
TVP23B-202ENST00000476139 KLHL23Q8NBE8 558 aa16.39■□□□□ 0.21
TVP23B-202ENST00000476139 OR4F6Q8NGB9 312 aa16.39■□□□□ 0.21
TVP23B-202ENST00000476139 CANT1Q8WVQ1 401 aa16.39■□□□□ 0.21
TVP23B-202ENST00000476139 PAWRQ96IZ0 340 aaKnown RBP16.39■□□□□ 0.21
TVP23B-202ENST00000476139 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.39■□□□□ 0.21
TVP23B-202ENST00000476139 CRLS1Q9UJA2 301 aa16.39■□□□□ 0.21
TVP23B-202ENST00000476139 RAB26Q9ULW5 256 aa16.39■□□□□ 0.21
TVP23B-202ENST00000476139 TRAV19A0A0A6YYK7 116 aa16.39■□□□□ 0.21
TVP23B-202ENST00000476139 TAPBPO15533 448 aa16.39■□□□□ 0.21
TVP23B-202ENST00000476139 IL12AP29459 219 aa16.39■□□□□ 0.21
TVP23B-202ENST00000476139 MAP7D1Q3KQU3 841 aa16.39■□□□□ 0.21
TVP23B-202ENST00000476139 RABL3Q5HYI8 236 aa16.39■□□□□ 0.21
TVP23B-202ENST00000476139 C1orf53Q5VUE5 145 aa16.39■□□□□ 0.21
TVP23B-202ENST00000476139 OGFOD2Q6N063 350 aa16.39■□□□□ 0.21
TVP23B-202ENST00000476139 IL27RAQ6UWB1 636 aa16.39■□□□□ 0.21
TVP23B-202ENST00000476139 DHFR2Q86XF0 187 aa16.39■□□□□ 0.21
TVP23B-202ENST00000476139 CPXM2Q8N436 756 aa16.39■□□□□ 0.21
TVP23B-202ENST00000476139 TCEAL4Q96EI5 215 aa16.39■□□□□ 0.21
TVP23B-202ENST00000476139 ZNF382Q96SR6 550 aa16.39■□□□□ 0.21
TVP23B-202ENST00000476139 MRPL40Q9NQ50 206 aaKnown RBP16.39■□□□□ 0.21
TVP23B-202ENST00000476139 AIG1Q9NVV5 245 aa16.39■□□□□ 0.21
TVP23B-202ENST00000476139 MBD1Q9UIS9 605 aaPredicted RBP16.39■□□□□ 0.21
TVP23B-202ENST00000476139 BBIP1A8MTZ0 92 aa16.38■□□□□ 0.21
TVP23B-202ENST00000476139 IGSF6O95976 241 aa16.38■□□□□ 0.21
TVP23B-202ENST00000476139 ITGALP20701 1170 aa16.38■□□□□ 0.21
TVP23B-202ENST00000476139 PIK3CGP48736 1102 aa16.38■□□□□ 0.21
TVP23B-202ENST00000476139 TRAP1Q12931 704 aaKnown RBP16.38■□□□□ 0.21
TVP23B-202ENST00000476139 FUT11Q495W5 492 aa16.38■□□□□ 0.21
TVP23B-202ENST00000476139 MPP7Q5T2T1 576 aa16.38■□□□□ 0.21
TVP23B-202ENST00000476139 LRRC66Q68CR7 880 aa16.38■□□□□ 0.21
TVP23B-202ENST00000476139 SPPL2CQ8IUH8 684 aa16.38■□□□□ 0.21
TVP23B-202ENST00000476139 SFRP1Q8N474 314 aa16.38■□□□□ 0.21
TVP23B-202ENST00000476139 KREMEN2Q8NCW0 462 aa16.38■□□□□ 0.21
TVP23B-202ENST00000476139 IPPKQ9H8X2 491 aa16.38■□□□□ 0.21
TVP23B-202ENST00000476139 GNPTGQ9UJJ9 305 aa16.38■□□□□ 0.21
TVP23B-202ENST00000476139 KIAA0100Q14667 2235 aaKnown RBP16.38■□□□□ 0.21
TVP23B-202ENST00000476139 CROCCQ5TZA2 2017 aa16.38■□□□□ 0.21
TVP23B-202ENST00000476139 TCRBV3S1A0A5B6 114 aa16.38■□□□□ 0.21
TVP23B-202ENST00000476139 SAC3D1A6NKF1 404 aa16.38■□□□□ 0.21
TVP23B-202ENST00000476139 PLOD2O00469 737 aa16.38■□□□□ 0.21
TVP23B-202ENST00000476139 AKAP10O43572 662 aa16.38■□□□□ 0.21
TVP23B-202ENST00000476139 SYNCRIPO60506 623 aaKnown RBP16.38■□□□□ 0.21
TVP23B-202ENST00000476139 VPS4BO75351 444 aa16.38■□□□□ 0.21
TVP23B-202ENST00000476139 FAM58BPP0C7Q3 252 aa16.38■□□□□ 0.21
TVP23B-202ENST00000476139 LINC00271P0C7V0 271 aa16.38■□□□□ 0.21
TVP23B-202ENST00000476139 ATP6V1B2P21281 511 aa16.38■□□□□ 0.21
TVP23B-202ENST00000476139 SERPINA4P29622 427 aa16.38■□□□□ 0.21
TVP23B-202ENST00000476139 PTSQ03393 145 aa16.38■□□□□ 0.21
TVP23B-202ENST00000476139 GTF2H2Q13888 395 aa16.38■□□□□ 0.21
TVP23B-202ENST00000476139 HMBOX1Q6NT76 420 aa16.38■□□□□ 0.21
TVP23B-202ENST00000476139 GTF2H2CQ6P1K8 395 aa16.38■□□□□ 0.21
TVP23B-202ENST00000476139 MBOAT1Q6ZNC8 495 aa16.38■□□□□ 0.21
TVP23B-202ENST00000476139 NUSAP1Q9BXS6 441 aaKnown RBP16.38■□□□□ 0.21
TVP23B-202ENST00000476139 PIF1Q9H611 641 aa16.38■□□□□ 0.21
TVP23B-202ENST00000476139 SAGE1Q9NXZ1 904 aa16.38■□□□□ 0.21
TVP23B-202ENST00000476139 NUDT4Q9NZJ9 180 aa16.38■□□□□ 0.21
TVP23B-202ENST00000476139 XIRP2A4UGR9 3374 aa16.38■□□□□ 0.21
TVP23B-202ENST00000476139 OBSL1O75147 1896 aa16.38■□□□□ 0.21
TVP23B-202ENST00000476139 HIDE1A8MVS5 230 aa16.38■□□□□ 0.21
TVP23B-202ENST00000476139 RFPL2O75678 378 aa16.38■□□□□ 0.21
TVP23B-202ENST00000476139 SLC22A3O75751 556 aa16.38■□□□□ 0.21
TVP23B-202ENST00000476139 TIMP1P01033 207 aa16.38■□□□□ 0.21
TVP23B-202ENST00000476139 PIM1P11309 404 aaPredicted RBP16.38■□□□□ 0.21
TVP23B-202ENST00000476139 ERVFC1P60507 584 aa16.38■□□□□ 0.21
TVP23B-202ENST00000476139 RPL26P61254 145 aaKnown RBP16.38■□□□□ 0.21
TVP23B-202ENST00000476139 ABRAXAS2Q15018 415 aa16.38■□□□□ 0.21
TVP23B-202ENST00000476139 MYLK3Q32MK0 819 aa16.38■□□□□ 0.21
TVP23B-202ENST00000476139 GPRC6AQ5T6X5 926 aa16.38■□□□□ 0.21
TVP23B-202ENST00000476139 SPATA19Q7Z5L4 167 aa16.38■□□□□ 0.21
TVP23B-202ENST00000476139 ADAMTSL2Q86TH1 951 aa16.38■□□□□ 0.21
TVP23B-202ENST00000476139 MINDY1Q8N5J2 469 aa16.38■□□□□ 0.21
TVP23B-202ENST00000476139 PROKR1Q8TCW9 393 aa16.38■□□□□ 0.21
TVP23B-202ENST00000476139 ZFAND2BQ8WV99 257 aa16.38■□□□□ 0.21
TVP23B-202ENST00000476139 MPP4Q96JB8 637 aa16.38■□□□□ 0.21
TVP23B-202ENST00000476139 LMLNQ96KR4 655 aa16.38■□□□□ 0.21
TVP23B-202ENST00000476139 HOPXQ9BPY8 73 aaPredicted RBP16.38■□□□□ 0.21
TVP23B-202ENST00000476139 DDX18Q9NVP1 670 aaKnown RBP16.38■□□□□ 0.21
TVP23B-202ENST00000476139 TRBV5-4A0A0C4DH59 114 aa16.37■□□□□ 0.21
TVP23B-202ENST00000476139 A0A1W2PP18 115 aa16.37■□□□□ 0.21
TVP23B-202ENST00000476139 SOCS5O75159 536 aa16.37■□□□□ 0.21
TVP23B-202ENST00000476139 LHCGRP22888 699 aa16.37■□□□□ 0.21
TVP23B-202ENST00000476139 RPL5P46777 297 aaKnown RBP16.37■□□□□ 0.21
TVP23B-202ENST00000476139 RCAN2Q14206 197 aa16.37■□□□□ 0.21
TVP23B-202ENST00000476139 PCBP2Q15366 365 aaKnown RBP eCLIP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms