RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 PHYKPLQ8IUZ5 450 aa6.88□□□□□ -1.31
LIMD1-204ENST00000474665 CNTN4Q8IWV2 1026 aa6.88□□□□□ -1.31
LIMD1-204ENST00000474665 GSPT2Q8IYD1 628 aaKnown RBP6.88□□□□□ -1.31
LIMD1-204ENST00000474665 ZBED8Q8IZ13 594 aa6.88□□□□□ -1.31
LIMD1-204ENST00000474665 LILRA3Q8N6C8 439 aaPredicted RBP6.88□□□□□ -1.31
LIMD1-204ENST00000474665 BAHD1Q8TBE0 780 aaPredicted RBP6.88□□□□□ -1.31
LIMD1-204ENST00000474665 LKAAEAR1Q8TD35 194 aa6.88□□□□□ -1.31
LIMD1-204ENST00000474665 IFT81Q8WYA0 676 aa6.88□□□□□ -1.31
LIMD1-204ENST00000474665 LPGAT1Q92604 370 aa6.88□□□□□ -1.31
LIMD1-204ENST00000474665 SKA1Q96BD8 255 aa6.88□□□□□ -1.31
LIMD1-204ENST00000474665 ULK4Q96C45 1275 aa6.88□□□□□ -1.31
LIMD1-204ENST00000474665 LRRC39Q96DD0 335 aa6.88□□□□□ -1.31
LIMD1-204ENST00000474665 CFAP36Q96G28 342 aa6.88□□□□□ -1.31
LIMD1-204ENST00000474665 C9orf72Q96LT7 481 aa6.88□□□□□ -1.31
LIMD1-204ENST00000474665 BIRC8Q96P09 236 aa6.88□□□□□ -1.31
LIMD1-204ENST00000474665 MCMBPQ9BTE3 642 aa6.88□□□□□ -1.31
LIMD1-204ENST00000474665 TXLNGYQ9BZA5 131 aa6.88□□□□□ -1.31
LIMD1-204ENST00000474665 PHACTR1Q9C0D0 580 aa6.88□□□□□ -1.31
LIMD1-204ENST00000474665 EPB41L4BQ9H329 900 aa6.88□□□□□ -1.31
LIMD1-204ENST00000474665 LRRC4CQ9HCJ2 640 aa6.88□□□□□ -1.31
LIMD1-204ENST00000474665 SAYSD1Q9NPB0 183 aa6.88□□□□□ -1.31
LIMD1-204ENST00000474665 FAM114A2Q9NRY5 505 aa6.88□□□□□ -1.31
LIMD1-204ENST00000474665 CATSPERZQ9NTU4 200 aa6.88□□□□□ -1.31
LIMD1-204ENST00000474665 SPATS2LQ9NUQ6 558 aaKnown RBP6.88□□□□□ -1.31
LIMD1-204ENST00000474665 TRNAU1APQ9NX07 287 aaKnown RBP6.88□□□□□ -1.31
LIMD1-204ENST00000474665 TOR4AQ9NXH8 423 aa6.88□□□□□ -1.31
LIMD1-204ENST00000474665 ZDHHC3Q9NYG2 299 aa6.88□□□□□ -1.31
LIMD1-204ENST00000474665 SAMD15Q9P1V8 674 aa6.88□□□□□ -1.31
LIMD1-204ENST00000474665 ZC3H7BQ9UGR2 993 aaKnown RBP6.88□□□□□ -1.31
LIMD1-204ENST00000474665 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.88□□□□□ -1.31
LIMD1-204ENST00000474665 APOBEC3BQ9UH17 382 aaKnown RBP6.88□□□□□ -1.31
LIMD1-204ENST00000474665 CRLS1Q9UJA2 301 aa6.88□□□□□ -1.31
LIMD1-204ENST00000474665 NFU1Q9UMS0 254 aa6.88□□□□□ -1.31
LIMD1-204ENST00000474665 PSAT1Q9Y617 370 aa6.88□□□□□ -1.31
LIMD1-204ENST00000474665 SLC30A1Q9Y6M5 507 aa6.88□□□□□ -1.31
LIMD1-204ENST00000474665 V9GYY5 206 aaPredicted RBP6.88□□□□□ -1.31
LIMD1-204ENST00000474665 PCM1Q15154 2024 aa6.88□□□□□ -1.31
LIMD1-204ENST00000474665 COL27A1Q8IZC6 1860 aaPredicted RBP6.87□□□□□ -1.31
LIMD1-204ENST00000474665 TCRBV9S1A1TA0A576 114 aa6.87□□□□□ -1.31
LIMD1-204ENST00000474665 IQCF5A8MTL0 148 aa6.87□□□□□ -1.31
LIMD1-204ENST00000474665 CXorf49A8MYA2 514 aaPredicted RBP6.87□□□□□ -1.31
LIMD1-204ENST00000474665 GPR89AB7ZAQ6 455 aa6.87□□□□□ -1.31
LIMD1-204ENST00000474665 CASC3O15234 703 aaKnown RBP6.87□□□□□ -1.31
LIMD1-204ENST00000474665 EIF3HO15372 352 aaKnown RBP eCLIP6.87□□□□□ -1.31
LIMD1-204ENST00000474665 AQP9O43315 295 aa6.87□□□□□ -1.31
LIMD1-204ENST00000474665 VEGFDO43915 354 aa6.87□□□□□ -1.31
LIMD1-204ENST00000474665 DFNA5O60443 496 aa6.87□□□□□ -1.31
LIMD1-204ENST00000474665 POP7O75817 140 aaKnown RBP6.87□□□□□ -1.31
LIMD1-204ENST00000474665 SLU7O95391 586 aaKnown RBP6.87□□□□□ -1.31
LIMD1-204ENST00000474665 ASMTLO95671 621 aa6.87□□□□□ -1.31
LIMD1-204ENST00000474665 TTC4O95801 387 aa6.87□□□□□ -1.31
LIMD1-204ENST00000474665 TNFP01375 233 aa6.87□□□□□ -1.31
LIMD1-204ENST00000474665 POLBP06746 335 aa6.87□□□□□ -1.31
LIMD1-204ENST00000474665 GPR89BP0CG08 455 aa6.87□□□□□ -1.31
LIMD1-204ENST00000474665 ACP5P13686 325 aa6.87□□□□□ -1.31
LIMD1-204ENST00000474665 ATP1B2P14415 290 aaPredicted RBP6.87□□□□□ -1.31
LIMD1-204ENST00000474665 ZNF7P17097 686 aaPredicted RBP6.87□□□□□ -1.31
LIMD1-204ENST00000474665 KELP23276 732 aa6.87□□□□□ -1.31
LIMD1-204ENST00000474665 SLC1A2P43004 574 aa6.87□□□□□ -1.31
LIMD1-204ENST00000474665 ARRB1P49407 418 aaPredicted RBP6.87□□□□□ -1.31
LIMD1-204ENST00000474665 PRLHRP49683 370 aa6.87□□□□□ -1.31
LIMD1-204ENST00000474665 PRAMEP78395 509 aa6.87□□□□□ -1.31
LIMD1-204ENST00000474665 MPP1Q00013 466 aa6.87□□□□□ -1.31
LIMD1-204ENST00000474665 SLC14A1Q13336 389 aa6.87□□□□□ -1.31
LIMD1-204ENST00000474665 CTBP1Q13363 440 aa6.87□□□□□ -1.31
LIMD1-204ENST00000474665 CUL1Q13616 776 aa6.87□□□□□ -1.31
LIMD1-204ENST00000474665 ITIH4Q14624 930 aa6.87□□□□□ -1.31
LIMD1-204ENST00000474665 KYNUQ16719 465 aa6.87□□□□□ -1.31
LIMD1-204ENST00000474665 LONRF1Q17RB8 773 aa6.87□□□□□ -1.31
LIMD1-204ENST00000474665 ERCC6LQ2NKX8 1250 aa6.87□□□□□ -1.31
LIMD1-204ENST00000474665 DEFB133Q30KQ1 61 aa6.87□□□□□ -1.31
LIMD1-204ENST00000474665 BCL7AQ4VC05 210 aa6.87□□□□□ -1.31
LIMD1-204ENST00000474665 FASTKD1Q53R41 847 aaKnown RBP6.87□□□□□ -1.31
LIMD1-204ENST00000474665 SPANXN3Q5MJ09 141 aa6.87□□□□□ -1.31
LIMD1-204ENST00000474665 CTSL3PQ5NE16 218 aa6.87□□□□□ -1.31
LIMD1-204ENST00000474665 TEDDM1Q5T9Z0 273 aa6.87□□□□□ -1.31
LIMD1-204ENST00000474665 ZNF470Q6ECI4 717 aa6.87□□□□□ -1.31
LIMD1-204ENST00000474665 TMEM220Q6QAJ8 160 aa6.87□□□□□ -1.31
LIMD1-204ENST00000474665 KCNMB4Q86W47 210 aa6.87□□□□□ -1.31
LIMD1-204ENST00000474665 CCDC25Q86WR0 208 aa6.87□□□□□ -1.31
LIMD1-204ENST00000474665 GALNT13Q8IUC8 556 aa6.87□□□□□ -1.31
LIMD1-204ENST00000474665 RELL1Q8IUW5 271 aa6.87□□□□□ -1.31
LIMD1-204ENST00000474665 OXR1Q8N573 874 aa6.87□□□□□ -1.31
LIMD1-204ENST00000474665 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.87□□□□□ -1.31
LIMD1-204ENST00000474665 C2CD4AQ8NCU7 369 aaPredicted RBP6.87□□□□□ -1.31
LIMD1-204ENST00000474665 ACVR1CQ8NER5 493 aa6.87□□□□□ -1.31
LIMD1-204ENST00000474665 GDAP1Q8TB36 358 aa6.87□□□□□ -1.31
LIMD1-204ENST00000474665 LMX1AQ8TE12 382 aa6.87□□□□□ -1.31
LIMD1-204ENST00000474665 PATE1Q8WXA2 126 aa6.87□□□□□ -1.31
LIMD1-204ENST00000474665 CERS2Q96G23 380 aa6.87□□□□□ -1.31
LIMD1-204ENST00000474665 WBP1Q96G27 269 aa6.87□□□□□ -1.31
LIMD1-204ENST00000474665 OR2M4Q96R27 311 aa6.87□□□□□ -1.31
LIMD1-204ENST00000474665 COPS8Q99627 209 aa6.87□□□□□ -1.31
LIMD1-204ENST00000474665 NAT9Q9BTE0 207 aa6.87□□□□□ -1.31
LIMD1-204ENST00000474665 FOXP3Q9BZS1 431 aa6.87□□□□□ -1.31
LIMD1-204ENST00000474665 SLC13A1Q9BZW2 595 aa6.87□□□□□ -1.31
LIMD1-204ENST00000474665 P2RY12Q9H244 342 aa6.87□□□□□ -1.31
LIMD1-204ENST00000474665 RMI1Q9H9A7 625 aa6.87□□□□□ -1.31
LIMD1-204ENST00000474665 C20orf96Q9NUD7 363 aaPredicted RBP6.87□□□□□ -1.31
LIMD1-204ENST00000474665 NINJ2Q9NZG7 142 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms