RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-223ENST00000473345 DESP17661 470 aa9.38□□□□□ -0.91
MCF2L-223ENST00000473345 IDSP22304 550 aa9.38□□□□□ -0.91
MCF2L-223ENST00000473345 TNFRSF8P28908 595 aa9.38□□□□□ -0.91
MCF2L-223ENST00000473345 CD68P34810 354 aaPredicted RBP9.38□□□□□ -0.91
MCF2L-223ENST00000473345 DMPKQ09013 629 aa9.38□□□□□ -0.91
MCF2L-223ENST00000473345 CCDC122Q5T0U0 273 aa9.38□□□□□ -0.91
MCF2L-223ENST00000473345 TRAPPC5Q8IUR0 188 aa9.38□□□□□ -0.91
MCF2L-223ENST00000473345 CISD2Q8N5K1 135 aaKnown RBP9.38□□□□□ -0.91
MCF2L-223ENST00000473345 GLIS1Q8NBF1 620 aa9.38□□□□□ -0.91
MCF2L-223ENST00000473345 CCHCR1Q8TD31 782 aa9.38□□□□□ -0.91
MCF2L-223ENST00000473345 UBXN4Q92575 508 aa9.38□□□□□ -0.91
MCF2L-223ENST00000473345 AGAP3Q96P47 875 aa9.38□□□□□ -0.91
MCF2L-223ENST00000473345 FCRL4Q96PJ5 515 aa9.38□□□□□ -0.91
MCF2L-223ENST00000473345 SMAD5Q99717 465 aaKnown RBP9.38□□□□□ -0.91
MCF2L-223ENST00000473345 BARD1Q99728 777 aaKnown RBP9.38□□□□□ -0.91
MCF2L-223ENST00000473345 ZNF670Q9BS34 389 aa9.38□□□□□ -0.91
MCF2L-223ENST00000473345 MAGEE1Q9HCI5 957 aa9.38□□□□□ -0.91
MCF2L-223ENST00000473345 AMACRQ9UHK6 382 aa9.38□□□□□ -0.91
MCF2L-223ENST00000473345 TCFL5Q9UL49 500 aa9.38□□□□□ -0.91
MCF2L-223ENST00000473345 DNPEPQ9ULA0 475 aa9.38□□□□□ -0.91
MCF2L-223ENST00000473345 OR6C74A6NCV1 312 aa9.37□□□□□ -0.91
MCF2L-223ENST00000473345 TLCD2A6NGC4 264 aa9.37□□□□□ -0.91
MCF2L-223ENST00000473345 OR2AG2A6NM03 316 aa9.37□□□□□ -0.91
MCF2L-223ENST00000473345 GPR89AB7ZAQ6 455 aa9.37□□□□□ -0.91
MCF2L-223ENST00000473345 F5H423 210 aaPredicted RBP9.37□□□□□ -0.91
MCF2L-223ENST00000473345 H3BMH7 237 aa9.37□□□□□ -0.91
MCF2L-223ENST00000473345 VEGFDO43915 354 aa9.37□□□□□ -0.91
MCF2L-223ENST00000473345 CPNE3O75131 537 aaKnown RBP9.37□□□□□ -0.91
MCF2L-223ENST00000473345 KLF7O75840 302 aaPredicted RBP9.37□□□□□ -0.91
MCF2L-223ENST00000473345 DDAH2O95865 285 aa9.37□□□□□ -0.91
MCF2L-223ENST00000473345 MT-ND3P03897 115 aa9.37□□□□□ -0.91
MCF2L-223ENST00000473345 GPR89BP0CG08 455 aa9.37□□□□□ -0.91
MCF2L-223ENST00000473345 MYBL1P10243 752 aa9.37□□□□□ -0.91
MCF2L-223ENST00000473345 MTHFD1P11586 935 aaKnown RBP9.37□□□□□ -0.91
MCF2L-223ENST00000473345 PVRP15151 417 aa9.37□□□□□ -0.91
MCF2L-223ENST00000473345 CDK11BP21127 795 aaKnown RBP9.37□□□□□ -0.91
MCF2L-223ENST00000473345 CES1P23141 567 aa9.37□□□□□ -0.91
MCF2L-223ENST00000473345 PBLDP30039 288 aaPredicted RBP9.37□□□□□ -0.91
MCF2L-223ENST00000473345 TUBB4BP68371 445 aa9.37□□□□□ -0.91
MCF2L-223ENST00000473345 HSD11B2P80365 405 aa9.37□□□□□ -0.91
MCF2L-223ENST00000473345 TUBB2AQ13885 445 aa9.37□□□□□ -0.91
MCF2L-223ENST00000473345 DNTTIP2Q5QJE6 756 aaKnown RBP9.37□□□□□ -0.91
MCF2L-223ENST00000473345 TIGD7Q6NT04 549 aaPredicted RBP9.37□□□□□ -0.91
MCF2L-223ENST00000473345 PPP1R2P3Q6NXS1 205 aa9.37□□□□□ -0.91
MCF2L-223ENST00000473345 KDELC1Q6UW63 502 aa9.37□□□□□ -0.91
MCF2L-223ENST00000473345 CUZD1Q86UP6 607 aa9.37□□□□□ -0.91
MCF2L-223ENST00000473345 TMEM126BQ8IUX1 230 aa9.37□□□□□ -0.91
MCF2L-223ENST00000473345 AVL9Q8NBF6 648 aa9.37□□□□□ -0.91
MCF2L-223ENST00000473345 CCNYQ8ND76 341 aa9.37□□□□□ -0.91
MCF2L-223ENST00000473345 PNPLA2Q96AD5 504 aa9.37□□□□□ -0.91
MCF2L-223ENST00000473345 RMDN2Q96LZ7 410 aa9.37□□□□□ -0.91
MCF2L-223ENST00000473345 OLFM3Q96PB7 478 aa9.37□□□□□ -0.91
MCF2L-223ENST00000473345 RNF157Q96PX1 679 aa9.37□□□□□ -0.91
MCF2L-223ENST00000473345 VPS35Q96QK1 796 aa9.37□□□□□ -0.91
MCF2L-223ENST00000473345 TUBB2BQ9BVA1 445 aa9.37□□□□□ -0.91
MCF2L-223ENST00000473345 NAT10Q9H0A0 1025 aaKnown RBP9.37□□□□□ -0.91
MCF2L-223ENST00000473345 KLHL25Q9H0H3 589 aa9.37□□□□□ -0.91
MCF2L-223ENST00000473345 WWP1Q9H0M0 922 aa9.37□□□□□ -0.91
MCF2L-223ENST00000473345 MRPL47Q9HD33 250 aaKnown RBP9.37□□□□□ -0.91
MCF2L-223ENST00000473345 KCND1Q9NSA2 647 aa9.37□□□□□ -0.91
MCF2L-223ENST00000473345 HRASLS2Q9NWW9 162 aa9.37□□□□□ -0.91
MCF2L-223ENST00000473345 IP6K2Q9UHH9 426 aa9.37□□□□□ -0.91
MCF2L-223ENST00000473345 BTRCQ9Y297 605 aa9.37□□□□□ -0.91
MCF2L-223ENST00000473345 ZNF451Q9Y4E5 1061 aa9.37□□□□□ -0.91
MCF2L-223ENST00000473345 CREBBPQ92793 2442 aa9.36□□□□□ -0.91
MCF2L-223ENST00000473345 SLC9B1P1A6NJY1 282 aa9.36□□□□□ -0.91
MCF2L-223ENST00000473345 ENO4A6NNW6 628 aa9.36□□□□□ -0.91
MCF2L-223ENST00000473345 BTN3A3O00478 584 aa9.36□□□□□ -0.91
MCF2L-223ENST00000473345 E2F3O00716 465 aa9.36□□□□□ -0.91
MCF2L-223ENST00000473345 ALOX12BO75342 701 aa9.36□□□□□ -0.91
MCF2L-223ENST00000473345 PMPCBO75439 489 aa9.36□□□□□ -0.91
MCF2L-223ENST00000473345 RAB40ALP0C0E4 278 aa9.36□□□□□ -0.91
MCF2L-223ENST00000473345 CCDC172P0C7W6 258 aa9.36□□□□□ -0.91
MCF2L-223ENST00000473345 ST6GAL1P15907 406 aa9.36□□□□□ -0.91
MCF2L-223ENST00000473345 POLR2CP19387 275 aaPredicted RBP9.36□□□□□ -0.91
MCF2L-223ENST00000473345 PBX1P40424 430 aa9.36□□□□□ -0.91
MCF2L-223ENST00000473345 SSR1P43307 286 aaKnown RBP9.36□□□□□ -0.91
MCF2L-223ENST00000473345 VAV2P52735 878 aa9.36□□□□□ -0.91
MCF2L-223ENST00000473345 RPS15P62841 145 aaKnown RBP9.36□□□□□ -0.91
MCF2L-223ENST00000473345 ACY1Q03154 408 aa9.36□□□□□ -0.91
MCF2L-223ENST00000473345 CDK18Q07002 472 aa9.36□□□□□ -0.91
MCF2L-223ENST00000473345 OLIG2Q13516 323 aa9.36□□□□□ -0.91
MCF2L-223ENST00000473345 ZNF658BQ4V348 819 aaPredicted RBP9.36□□□□□ -0.91
MCF2L-223ENST00000473345 GPRC6AQ5T6X5 926 aa9.36□□□□□ -0.91
MCF2L-223ENST00000473345 METRNLQ641Q3 311 aa9.36□□□□□ -0.91
MCF2L-223ENST00000473345 PDPK2PQ6A1A2 396 aa9.36□□□□□ -0.91
MCF2L-223ENST00000473345 TMEM220Q6QAJ8 160 aa9.36□□□□□ -0.91
MCF2L-223ENST00000473345 FAM151BQ6UXP7 276 aa9.36□□□□□ -0.91
MCF2L-223ENST00000473345 DET1Q7L5Y6 550 aa9.36□□□□□ -0.91
MCF2L-223ENST00000473345 DAAM2Q86T65 1068 aa9.36□□□□□ -0.91
MCF2L-223ENST00000473345 LUZP1Q86V48 1076 aa9.36□□□□□ -0.91
MCF2L-223ENST00000473345 OXNAD1Q96HP4 312 aaPredicted RBP9.36□□□□□ -0.91
MCF2L-223ENST00000473345 LRFN5Q96NI6 719 aa9.36□□□□□ -0.91
MCF2L-223ENST00000473345 GORASP1Q9BQQ3 440 aa9.36□□□□□ -0.91
MCF2L-223ENST00000473345 MESP1Q9BRJ9 268 aa9.36□□□□□ -0.91
MCF2L-223ENST00000473345 NLNQ9BYT8 704 aa9.36□□□□□ -0.91
MCF2L-223ENST00000473345 GPR63Q9BZJ6 419 aa9.36□□□□□ -0.91
MCF2L-223ENST00000473345 ZNF552Q9H707 407 aaPredicted RBP9.36□□□□□ -0.91
MCF2L-223ENST00000473345 SLAMF7Q9NQ25 335 aa9.36□□□□□ -0.91
MCF2L-223ENST00000473345 IMP3Q9NV31 184 aaKnown RBP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms