RNA–Protein interactions for RNA: ENST00000471235.1

HDAC7-220, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 1,012 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-220ENST00000471235 ADAMTS20P59510 1910 aa19.37■□□□□ 0.69
HDAC7-220ENST00000471235 C17orf113A0A1B0GUU1 675 aa19.36■□□□□ 0.69
HDAC7-220ENST00000471235 FAM221BA6H8Z2 402 aa19.36■□□□□ 0.69
HDAC7-220ENST00000471235 OR52A4PA6NMU1 304 aa19.36■□□□□ 0.69
HDAC7-220ENST00000471235 QSOX1O00391 747 aa19.36■□□□□ 0.69
HDAC7-220ENST00000471235 MT-CO3P00414 261 aa19.36■□□□□ 0.69
HDAC7-220ENST00000471235 FTH1P02794 183 aa19.36■□□□□ 0.69
HDAC7-220ENST00000471235 OGNP20774 298 aaKnown RBP19.36■□□□□ 0.69
HDAC7-220ENST00000471235 PPARGP37231 505 aaPredicted RBP19.36■□□□□ 0.69
HDAC7-220ENST00000471235 SLC19A1P41440 591 aa19.36■□□□□ 0.69
HDAC7-220ENST00000471235 CALCOCO2Q13137 446 aa19.36■□□□□ 0.69
HDAC7-220ENST00000471235 CRYMQ14894 314 aa19.36■□□□□ 0.69
HDAC7-220ENST00000471235 CLCA4Q14CN2 919 aa19.36■□□□□ 0.69
HDAC7-220ENST00000471235 LONRF1Q17RB8 773 aa19.36■□□□□ 0.69
HDAC7-220ENST00000471235 MRNIPQ6NTE8 343 aa19.36■□□□□ 0.69
HDAC7-220ENST00000471235 AVL9Q8NBF6 648 aa19.36■□□□□ 0.69
HDAC7-220ENST00000471235 SERBP1Q8NC51 408 aaKnown RBP eCLIP19.36■□□□□ 0.69
HDAC7-220ENST00000471235 WDR48Q8TAF3 677 aa19.36■□□□□ 0.69
HDAC7-220ENST00000471235 LKAAEAR1Q8TD35 194 aa19.36■□□□□ 0.69
HDAC7-220ENST00000471235 RMDN2Q96LZ7 410 aa19.36■□□□□ 0.69
HDAC7-220ENST00000471235 WWP1Q9H0M0 922 aa19.36■□□□□ 0.69
HDAC7-220ENST00000471235 LRRN3Q9H3W5 708 aa19.36■□□□□ 0.69
HDAC7-220ENST00000471235 STN1Q9H668 368 aaKnown RBP19.36■□□□□ 0.69
HDAC7-220ENST00000471235 CLCA2Q9UQC9 943 aa19.36■□□□□ 0.69
HDAC7-220ENST00000471235 UTP11Q9Y3A2 253 aaKnown RBP19.36■□□□□ 0.69
HDAC7-220ENST00000471235 PRMT5O14744 637 aaPredicted RBP19.35■□□□□ 0.69
HDAC7-220ENST00000471235 NDUFS3O75489 264 aa19.35■□□□□ 0.69
HDAC7-220ENST00000471235 POLBP06746 335 aa19.35■□□□□ 0.69
HDAC7-220ENST00000471235 GSTM1P09488 218 aa19.35■□□□□ 0.69
HDAC7-220ENST00000471235 OR56A5P0C7T3 313 aa19.35■□□□□ 0.69
HDAC7-220ENST00000471235 XRCC1P18887 633 aaPredicted RBP19.35■□□□□ 0.69
HDAC7-220ENST00000471235 ELK3P41970 407 aa19.35■□□□□ 0.69
HDAC7-220ENST00000471235 HALP42357 657 aa19.35■□□□□ 0.69
HDAC7-220ENST00000471235 GPR3P46089 330 aa19.35■□□□□ 0.69
HDAC7-220ENST00000471235 OR1D5P58170 312 aa19.35■□□□□ 0.69
HDAC7-220ENST00000471235 GSTM4Q03013 218 aa19.35■□□□□ 0.69
HDAC7-220ENST00000471235 SPIDRQ14159 915 aa19.35■□□□□ 0.69
HDAC7-220ENST00000471235 HP1BP3Q5SSJ5 553 aaPredicted RBP19.35■□□□□ 0.69
HDAC7-220ENST00000471235 ZNF470Q6ECI4 717 aa19.35■□□□□ 0.69
HDAC7-220ENST00000471235 NEPROQ6NW34 567 aa19.35■□□□□ 0.69
HDAC7-220ENST00000471235 CCNI2Q6ZMN8 369 aaPredicted RBP19.35■□□□□ 0.69
HDAC7-220ENST00000471235 RBM44Q6ZP01 1051 aaKnown RBP19.35■□□□□ 0.69
HDAC7-220ENST00000471235 TRIM48Q8IWZ4 208 aa19.35■□□□□ 0.69
HDAC7-220ENST00000471235 CFAP206Q8IYR0 622 aa19.35■□□□□ 0.69
HDAC7-220ENST00000471235 DCBLD1Q8N8Z6 715 aa19.35■□□□□ 0.69
HDAC7-220ENST00000471235 MNS1Q8NEH6 495 aa19.35■□□□□ 0.69
HDAC7-220ENST00000471235 LPGAT1Q92604 370 aa19.35■□□□□ 0.69
HDAC7-220ENST00000471235 NAT9Q9BTE0 207 aa19.35■□□□□ 0.69
HDAC7-220ENST00000471235 P2RY12Q9H244 342 aa19.35■□□□□ 0.69
HDAC7-220ENST00000471235 PLAC1Q9HBJ0 212 aa19.35■□□□□ 0.69
HDAC7-220ENST00000471235 C20orf96Q9NUD7 363 aaPredicted RBP19.35■□□□□ 0.69
HDAC7-220ENST00000471235 POT1Q9NUX5 634 aa19.35■□□□□ 0.69
HDAC7-220ENST00000471235 ACSL5Q9ULC5 683 aa19.35■□□□□ 0.69
HDAC7-220ENST00000471235 MSRB2Q9Y3D2 182 aa19.35■□□□□ 0.69
HDAC7-220ENST00000471235 TEX264Q9Y6I9 313 aa19.35■□□□□ 0.69
HDAC7-220ENST00000471235 FAM169AQ9Y6X4 670 aa19.35■□□□□ 0.69
HDAC7-220ENST00000471235 UBA6A0AVT1 1052 aaPredicted RBP19.34■□□□□ 0.69
HDAC7-220ENST00000471235 D6RAR5 112 aa19.34■□□□□ 0.69
HDAC7-220ENST00000471235 E7ESA3 106 aa19.34■□□□□ 0.69
HDAC7-220ENST00000471235 B4GAT1O43505 415 aa19.34■□□□□ 0.69
HDAC7-220ENST00000471235 CSO75390 466 aaKnown RBP19.34■□□□□ 0.69
HDAC7-220ENST00000471235 TCEA3O75764 348 aa19.34■□□□□ 0.69
HDAC7-220ENST00000471235 SLC35G4P0C7Q5 338 aa19.34■□□□□ 0.69
HDAC7-220ENST00000471235 JUPP14923 745 aa19.34■□□□□ 0.69
HDAC7-220ENST00000471235 RPS3P23396 243 aaKnown RBP eCLIP19.34■□□□□ 0.69
HDAC7-220ENST00000471235 PREPP48147 710 aa19.34■□□□□ 0.69
HDAC7-220ENST00000471235 PDX1P52945 283 aa19.34■□□□□ 0.69
HDAC7-220ENST00000471235 SLC7A5Q01650 507 aa19.34■□□□□ 0.69
HDAC7-220ENST00000471235 THOC5Q13769 683 aaKnown RBP19.34■□□□□ 0.69
HDAC7-220ENST00000471235 RPE65Q16518 533 aa19.34■□□□□ 0.69
HDAC7-220ENST00000471235 SPANXN3Q5MJ09 141 aa19.34■□□□□ 0.69
HDAC7-220ENST00000471235 RNF187Q5TA31 235 aaPredicted RBP19.34■□□□□ 0.69
HDAC7-220ENST00000471235 DUS1LQ6P1R4 473 aaKnown RBP19.34■□□□□ 0.69
HDAC7-220ENST00000471235 CENPUQ71F23 418 aa19.34■□□□□ 0.69
HDAC7-220ENST00000471235 SDCCAG8Q86SQ7 713 aaPredicted RBP19.34■□□□□ 0.69
HDAC7-220ENST00000471235 CILP2Q8IUL8 1156 aa19.34■□□□□ 0.69
HDAC7-220ENST00000471235 UNC5BQ8IZJ1 945 aa19.34■□□□□ 0.69
HDAC7-220ENST00000471235 CACTIN-AS1Q8N1I8 211 aa19.34■□□□□ 0.69
HDAC7-220ENST00000471235 MMGT1Q8N4V1 131 aa19.34■□□□□ 0.69
HDAC7-220ENST00000471235 NOA1Q8NC60 698 aaKnown RBP19.34■□□□□ 0.69
HDAC7-220ENST00000471235 ELMO1Q92556 727 aa19.34■□□□□ 0.69
HDAC7-220ENST00000471235 LRRC39Q96DD0 335 aa19.34■□□□□ 0.69
HDAC7-220ENST00000471235 CXorf40BQ96DE9 158 aa19.34■□□□□ 0.69
HDAC7-220ENST00000471235 CFAP36Q96G28 342 aa19.34■□□□□ 0.69
HDAC7-220ENST00000471235 DEPDC7Q96QD5 511 aa19.34■□□□□ 0.69
HDAC7-220ENST00000471235 GFM1Q96RP9 751 aaKnown RBP19.34■□□□□ 0.69
HDAC7-220ENST00000471235 SLC38A3Q99624 504 aa19.34■□□□□ 0.69
HDAC7-220ENST00000471235 LRRC1Q9BTT6 524 aa19.34■□□□□ 0.69
HDAC7-220ENST00000471235 ATXN7L1Q9ULK2 861 aaPredicted RBP19.34■□□□□ 0.69
HDAC7-220ENST00000471235 AKAP13Q12802 2813 aa19.34■□□□□ 0.69
HDAC7-220ENST00000471235 IGHV1OR21-1A0A087WYE8 117 aa19.33■□□□□ 0.68
HDAC7-220ENST00000471235 PRAMEF33A0A0G2JMD5 474 aa19.33■□□□□ 0.68
HDAC7-220ENST00000471235 CTAGE15A4D2H0 777 aa19.33■□□□□ 0.68
HDAC7-220ENST00000471235 F8W8V4 182 aa19.33■□□□□ 0.68
HDAC7-220ENST00000471235 TTC4O95801 387 aa19.33■□□□□ 0.68
HDAC7-220ENST00000471235 VIPP01282 170 aa19.33■□□□□ 0.68
HDAC7-220ENST00000471235 F7P08709 466 aaPredicted RBP19.33■□□□□ 0.68
HDAC7-220ENST00000471235 CTAGE8P0CG41 777 aa19.33■□□□□ 0.68
HDAC7-220ENST00000471235 MTHFD1P11586 935 aaKnown RBP19.33■□□□□ 0.68
HDAC7-220ENST00000471235 ITGB6P18564 788 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms