RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 ADAMTSL2Q86TH1 951 aa9.6□□□□□ -0.87
CCM2-204ENST00000470837 WDR5BQ86VZ2 330 aa9.6□□□□□ -0.87
CCM2-204ENST00000470837 LONP2Q86WA8 852 aa9.6□□□□□ -0.87
CCM2-204ENST00000470837 DCP2Q8IU60 420 aaKnown RBP9.6□□□□□ -0.87
CCM2-204ENST00000470837 CFAP206Q8IYR0 622 aa9.6□□□□□ -0.87
CCM2-204ENST00000470837 CENPLQ8N0S6 344 aaPredicted RBP9.6□□□□□ -0.87
CCM2-204ENST00000470837 PLD6Q8N2A8 252 aaKnown RBP9.6□□□□□ -0.87
CCM2-204ENST00000470837 FSTL5Q8N475 847 aaPredicted RBP9.6□□□□□ -0.87
CCM2-204ENST00000470837 BEND7Q8N7W2 519 aaPredicted RBP9.6□□□□□ -0.87
CCM2-204ENST00000470837 OR56A4Q8NGH8 313 aa9.6□□□□□ -0.87
CCM2-204ENST00000470837 RHEBL1Q8TAI7 183 aa9.6□□□□□ -0.87
CCM2-204ENST00000470837 HM13Q8TCT9 377 aa9.6□□□□□ -0.87
CCM2-204ENST00000470837 NAT14Q8WUY8 206 aa9.6□□□□□ -0.87
CCM2-204ENST00000470837 EEF1AKMT1Q8WVE0 214 aa9.6□□□□□ -0.87
CCM2-204ENST00000470837 ANKRD49Q8WVL7 239 aa9.6□□□□□ -0.87
CCM2-204ENST00000470837 KLHDC7BQ96G42 594 aa9.6□□□□□ -0.87
CCM2-204ENST00000470837 PDLIM5Q96HC4 596 aaKnown RBP9.6□□□□□ -0.87
CCM2-204ENST00000470837 HIST1H2AHQ96KK5 128 aa9.6□□□□□ -0.87
CCM2-204ENST00000470837 UBXN10Q96LJ8 280 aa9.6□□□□□ -0.87
CCM2-204ENST00000470837 HSPA12BQ96MM6 686 aa9.6□□□□□ -0.87
CCM2-204ENST00000470837 WDR92Q96MX6 357 aa9.6□□□□□ -0.87
CCM2-204ENST00000470837 HIST1H2AJQ99878 128 aa9.6□□□□□ -0.87
CCM2-204ENST00000470837 H2AFJQ9BTM1 129 aa9.6□□□□□ -0.87
CCM2-204ENST00000470837 LGR4Q9BXB1 951 aa9.6□□□□□ -0.87
CCM2-204ENST00000470837 UNKQ9C0B0 810 aaKnown RBP9.6□□□□□ -0.87
CCM2-204ENST00000470837 MIR1-1HGQ9H1L0 117 aa9.6□□□□□ -0.87
CCM2-204ENST00000470837 ALG9Q9H6U8 611 aa9.6□□□□□ -0.87
CCM2-204ENST00000470837 PRMT8Q9NR22 394 aaPredicted RBP9.6□□□□□ -0.87
CCM2-204ENST00000470837 IGSF5Q9NSI5 407 aa9.6□□□□□ -0.87
CCM2-204ENST00000470837 TMEM216Q9P0N5 145 aa9.6□□□□□ -0.87
CCM2-204ENST00000470837 DLGAP2Q9P1A6 1054 aa9.6□□□□□ -0.87
CCM2-204ENST00000470837 CPSF2Q9P2I0 782 aaKnown RBP9.6□□□□□ -0.87
CCM2-204ENST00000470837 XPR1Q9UBH6 696 aa9.6□□□□□ -0.87
CCM2-204ENST00000470837 KLQ9UEF7 1012 aa9.6□□□□□ -0.87
CCM2-204ENST00000470837 ADAM21Q9UKJ8 722 aa9.6□□□□□ -0.87
CCM2-204ENST00000470837 TMCO1Q9UM00 188 aa9.6□□□□□ -0.87
CCM2-204ENST00000470837 GPSM3Q9Y4H4 160 aa9.6□□□□□ -0.87
CCM2-204ENST00000470837 MYLKQ15746 1914 aa9.59□□□□□ -0.87
CCM2-204ENST00000470837 NPEPPSL1A6NEC2 478 aa9.59□□□□□ -0.87
CCM2-204ENST00000470837 POM121BA6NF01 834 aa9.59□□□□□ -0.87
CCM2-204ENST00000470837 SUPT3HB4E1H0 165 aa9.59□□□□□ -0.87
CCM2-204ENST00000470837 H3BM21 787 aa9.59□□□□□ -0.87
CCM2-204ENST00000470837 IFRD1O00458 451 aaPredicted RBP9.59□□□□□ -0.87
CCM2-204ENST00000470837 TNFRSF10CO14798 259 aa9.59□□□□□ -0.87
CCM2-204ENST00000470837 SUPT3HO75486 399 aa9.59□□□□□ -0.87
CCM2-204ENST00000470837 TOP3BO95985 862 aaKnown RBP9.59□□□□□ -0.87
CCM2-204ENST00000470837 PROCP04070 461 aa9.59□□□□□ -0.87
CCM2-204ENST00000470837 IGHV4-34P06331 123 aa9.59□□□□□ -0.87
CCM2-204ENST00000470837 C8GP07360 202 aa9.59□□□□□ -0.87
CCM2-204ENST00000470837 MPC1LP0DKB6 136 aa9.59□□□□□ -0.87
CCM2-204ENST00000470837 GFAPP14136 432 aa9.59□□□□□ -0.87
CCM2-204ENST00000470837 CD1DP15813 335 aa9.59□□□□□ -0.87
CCM2-204ENST00000470837 CYP2A7P20853 494 aa9.59□□□□□ -0.87
CCM2-204ENST00000470837 ATP5F1P24539 256 aaPredicted RBP9.59□□□□□ -0.87
CCM2-204ENST00000470837 GNPDA1P46926 289 aa9.59□□□□□ -0.87
CCM2-204ENST00000470837 FNTBP49356 437 aa9.59□□□□□ -0.87
CCM2-204ENST00000470837 CSRP3P50461 194 aa9.59□□□□□ -0.87
CCM2-204ENST00000470837 BLKP51451 505 aa9.59□□□□□ -0.87
CCM2-204ENST00000470837 PGGT1BP53609 377 aa9.59□□□□□ -0.87
CCM2-204ENST00000470837 PFN3P60673 137 aa9.59□□□□□ -0.87
CCM2-204ENST00000470837 ARHGAP8P85298 464 aa9.59□□□□□ -0.87
CCM2-204ENST00000470837 OVGP1Q12889 678 aa9.59□□□□□ -0.87
CCM2-204ENST00000470837 RPA4Q13156 261 aa9.59□□□□□ -0.87
CCM2-204ENST00000470837 MPP2Q14168 576 aa9.59□□□□□ -0.87
CCM2-204ENST00000470837 PLA2G4EQ3MJ16 856 aa9.59□□□□□ -0.87
CCM2-204ENST00000470837 ACSBG2Q5FVE4 666 aa9.59□□□□□ -0.87
CCM2-204ENST00000470837 CFAP157Q5JU67 520 aa9.59□□□□□ -0.87
CCM2-204ENST00000470837 TMEM207Q6UWW9 146 aa9.59□□□□□ -0.87
CCM2-204ENST00000470837 NEK10Q6ZWH5 1172 aa9.59□□□□□ -0.87
CCM2-204ENST00000470837 RD3Q7Z3Z2 195 aa9.59□□□□□ -0.87
CCM2-204ENST00000470837 GPSM1Q86YR5 675 aa9.59□□□□□ -0.87
CCM2-204ENST00000470837 SLC22A9Q8IVM8 553 aa9.59□□□□□ -0.87
CCM2-204ENST00000470837 FBXL6Q8N531 539 aa9.59□□□□□ -0.87
CCM2-204ENST00000470837 DEFB119Q8N690 84 aa9.59□□□□□ -0.87
CCM2-204ENST00000470837 DTWD2Q8NBA8 298 aa9.59□□□□□ -0.87
CCM2-204ENST00000470837 TMEM145Q8NBT3 493 aa9.59□□□□□ -0.87
CCM2-204ENST00000470837 OR2L2Q8NH16 312 aa9.59□□□□□ -0.87
CCM2-204ENST00000470837 GIMAP7Q8NHV1 300 aa9.59□□□□□ -0.87
CCM2-204ENST00000470837 LKAAEAR1Q8TD35 194 aa9.59□□□□□ -0.87
CCM2-204ENST00000470837 DENND1AQ8TEH3 1009 aa9.59□□□□□ -0.87
CCM2-204ENST00000470837 GLMNQ92990 594 aa9.59□□□□□ -0.87
CCM2-204ENST00000470837 EXT2Q93063 718 aa9.59□□□□□ -0.87
CCM2-204ENST00000470837 KIAA1191Q96A73 305 aa9.59□□□□□ -0.87
CCM2-204ENST00000470837 CCDC97Q96F63 343 aaPredicted RBP9.59□□□□□ -0.87
CCM2-204ENST00000470837 LINC00615Q96LM1 132 aaPredicted RBP9.59□□□□□ -0.87
CCM2-204ENST00000470837 OR2M4Q96R27 311 aa9.59□□□□□ -0.87
CCM2-204ENST00000470837 C1QTNF1Q9BXJ1 281 aa9.59□□□□□ -0.87
CCM2-204ENST00000470837 OSGEPL1Q9H4B0 414 aa9.59□□□□□ -0.87
CCM2-204ENST00000470837 CARS2Q9HA77 564 aaKnown RBP9.59□□□□□ -0.87
CCM2-204ENST00000470837 CYP4F12Q9HCS2 524 aa9.59□□□□□ -0.87
CCM2-204ENST00000470837 ZNF358Q9NW07 568 aa9.59□□□□□ -0.87
CCM2-204ENST00000470837 GALPQ9UBC7 116 aa9.59□□□□□ -0.87
CCM2-204ENST00000470837 COPG2Q9UBF2 871 aa9.59□□□□□ -0.87
CCM2-204ENST00000470837 SLC17A4Q9Y2C5 497 aa9.59□□□□□ -0.87
CCM2-204ENST00000470837 DNAJC16Q9Y2G8 782 aa9.59□□□□□ -0.87
CCM2-204ENST00000470837 MED16Q9Y2X0 877 aa9.59□□□□□ -0.87
CCM2-204ENST00000470837 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.58□□□□□ -0.88
CCM2-204ENST00000470837 PRSS38A1L453 326 aa9.58□□□□□ -0.88
CCM2-204ENST00000470837 H0Y8X5 98 aa9.58□□□□□ -0.88
CCM2-204ENST00000470837 TK2O00142 265 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms