RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.96□□□□□ -0.82
HDAC3-203ENST00000467533 ZNF789Q5FWF6 425 aa9.96□□□□□ -0.82
HDAC3-203ENST00000467533 RALGPS1Q5JS13 557 aa9.96□□□□□ -0.82
HDAC3-203ENST00000467533 ZFYVE27Q5T4F4 411 aa9.96□□□□□ -0.82
HDAC3-203ENST00000467533 PLEKHA7Q6IQ23 1121 aa9.96□□□□□ -0.82
HDAC3-203ENST00000467533 WASH2PQ6VEQ5 465 aa9.96□□□□□ -0.82
HDAC3-203ENST00000467533 LINC00696Q6ZRV3 163 aa9.96□□□□□ -0.82
HDAC3-203ENST00000467533 ADGRG6Q86SQ4 1221 aa9.96□□□□□ -0.82
HDAC3-203ENST00000467533 TMEM200AQ86VY9 491 aa9.96□□□□□ -0.82
HDAC3-203ENST00000467533 CARFQ8N187 725 aa9.96□□□□□ -0.82
HDAC3-203ENST00000467533 ANKRD20A12PQ8NF67 263 aa9.96□□□□□ -0.82
HDAC3-203ENST00000467533 OR1N1Q8NGS0 311 aa9.96□□□□□ -0.82
HDAC3-203ENST00000467533 OR2Y1Q8NGV0 311 aa9.96□□□□□ -0.82
HDAC3-203ENST00000467533 PPM1MQ96MI6 270 aa9.96□□□□□ -0.82
HDAC3-203ENST00000467533 TRIM56Q9BRZ2 755 aaKnown RBP9.96□□□□□ -0.82
HDAC3-203ENST00000467533 DHX35Q9H5Z1 703 aaKnown RBP9.96□□□□□ -0.82
HDAC3-203ENST00000467533 SLC6A20Q9NP91 592 aa9.96□□□□□ -0.82
HDAC3-203ENST00000467533 FBXL4Q9UKA2 621 aa9.96□□□□□ -0.82
HDAC3-203ENST00000467533 AP4E1Q9UPM8 1137 aa9.96□□□□□ -0.82
HDAC3-203ENST00000467533 WDR37Q9Y2I8 494 aa9.96□□□□□ -0.82
HDAC3-203ENST00000467533 GTPBP10A4D1E9 387 aaKnown RBP9.95□□□□□ -0.82
HDAC3-203ENST00000467533 CHUKO15111 745 aa9.95□□□□□ -0.82
HDAC3-203ENST00000467533 ATMINO43313 823 aaPredicted RBP9.95□□□□□ -0.82
HDAC3-203ENST00000467533 ZNF749O43361 778 aa9.95□□□□□ -0.82
HDAC3-203ENST00000467533 FZD6O60353 706 aa9.95□□□□□ -0.82
HDAC3-203ENST00000467533 FGFR1OPO95684 399 aaKnown RBP9.95□□□□□ -0.82
HDAC3-203ENST00000467533 HBQ1P09105 142 aa9.95□□□□□ -0.82
HDAC3-203ENST00000467533 ERCC2P18074 760 aa9.95□□□□□ -0.82
HDAC3-203ENST00000467533 CDH3P22223 829 aa9.95□□□□□ -0.82
HDAC3-203ENST00000467533 MMP13P45452 471 aa9.95□□□□□ -0.82
HDAC3-203ENST00000467533 PREPP48147 710 aa9.95□□□□□ -0.82
HDAC3-203ENST00000467533 SPINT3P49223 89 aa9.95□□□□□ -0.82
HDAC3-203ENST00000467533 KPNA2P52292 529 aaKnown RBP9.95□□□□□ -0.82
HDAC3-203ENST00000467533 FOXL2P58012 376 aa9.95□□□□□ -0.82
HDAC3-203ENST00000467533 SLC9A5Q14940 896 aa9.95□□□□□ -0.82
HDAC3-203ENST00000467533 INAQ16352 499 aa9.95□□□□□ -0.82
HDAC3-203ENST00000467533 C1orf189Q5VU69 101 aa9.95□□□□□ -0.82
HDAC3-203ENST00000467533 ALS2CLQ60I27 953 aa9.95□□□□□ -0.82
HDAC3-203ENST00000467533 ZNF385CQ66K41 422 aaPredicted RBP9.95□□□□□ -0.82
HDAC3-203ENST00000467533 WDR59Q6PJI9 974 aa9.95□□□□□ -0.82
HDAC3-203ENST00000467533 RFX8Q6ZV50 586 aa9.95□□□□□ -0.82
HDAC3-203ENST00000467533 Q71RC1 249 aaPredicted RBP9.95□□□□□ -0.82
HDAC3-203ENST00000467533 RAVER1Q8IY67 606 aaKnown RBP9.95□□□□□ -0.82
HDAC3-203ENST00000467533 CATSPER1Q8NEC5 780 aa9.95□□□□□ -0.82
HDAC3-203ENST00000467533 SLC30A5Q8TAD4 765 aa9.95□□□□□ -0.82
HDAC3-203ENST00000467533 NSMCE1Q8WV22 266 aa9.95□□□□□ -0.82
HDAC3-203ENST00000467533 TAAR6Q96RI8 345 aa9.95□□□□□ -0.82
HDAC3-203ENST00000467533 FOXC2Q99958 501 aa9.95□□□□□ -0.82
HDAC3-203ENST00000467533 NDC1Q9BTX1 674 aa9.95□□□□□ -0.82
HDAC3-203ENST00000467533 SPATA16Q9BXB7 569 aa9.95□□□□□ -0.82
HDAC3-203ENST00000467533 ENKD1Q9H0I2 346 aa9.95□□□□□ -0.82
HDAC3-203ENST00000467533 SYTL2Q9HCH5 934 aa9.95□□□□□ -0.82
HDAC3-203ENST00000467533 TRIM39Q9HCM9 518 aa9.95□□□□□ -0.82
HDAC3-203ENST00000467533 IFT80Q9P2H3 777 aaPredicted RBP9.95□□□□□ -0.82
HDAC3-203ENST00000467533 SPTBP11277 2137 aa9.95□□□□□ -0.82
HDAC3-203ENST00000467533 MAP1AP78559 2803 aaPredicted RBP9.95□□□□□ -0.82
HDAC3-203ENST00000467533 ZNF469Q96JG9 3925 aaPredicted RBP9.95□□□□□ -0.82
HDAC3-203ENST00000467533 ANKRD62A6NC57 917 aa9.94□□□□□ -0.82
HDAC3-203ENST00000467533 OR6C74A6NCV1 312 aa9.94□□□□□ -0.82
HDAC3-203ENST00000467533 SLC9B1P1A6NJY1 282 aa9.94□□□□□ -0.82
HDAC3-203ENST00000467533 VEGFDO43915 354 aa9.94□□□□□ -0.82
HDAC3-203ENST00000467533 SLC19A2O60779 497 aa9.94□□□□□ -0.82
HDAC3-203ENST00000467533 MTX2O75431 263 aa9.94□□□□□ -0.82
HDAC3-203ENST00000467533 CD63P08962 238 aa9.94□□□□□ -0.82
HDAC3-203ENST00000467533 CBSLP0DN79 551 aa9.94□□□□□ -0.82
HDAC3-203ENST00000467533 DESP17661 470 aa9.94□□□□□ -0.82
HDAC3-203ENST00000467533 CBSP35520 551 aa9.94□□□□□ -0.82
HDAC3-203ENST00000467533 ARG2P78540 354 aa9.94□□□□□ -0.82
HDAC3-203ENST00000467533 ITKQ08881 620 aa9.94□□□□□ -0.82
HDAC3-203ENST00000467533 C3AR1Q16581 482 aa9.94□□□□□ -0.82
HDAC3-203ENST00000467533 SKOR2Q2VWA4 1001 aaPredicted RBP9.94□□□□□ -0.82
HDAC3-203ENST00000467533 ISLR2Q6UXK2 745 aa9.94□□□□□ -0.82
HDAC3-203ENST00000467533 TRAPPC5Q8IUR0 188 aa9.94□□□□□ -0.82
HDAC3-203ENST00000467533 LPCAT1Q8NF37 534 aa9.94□□□□□ -0.82
HDAC3-203ENST00000467533 CCHCR1Q8TD31 782 aa9.94□□□□□ -0.82
HDAC3-203ENST00000467533 SLC20A1Q8WUM9 679 aa9.94□□□□□ -0.82
HDAC3-203ENST00000467533 TEKT4Q8WW24 435 aa9.94□□□□□ -0.82
HDAC3-203ENST00000467533 NRGNQ92686 78 aa9.94□□□□□ -0.82
HDAC3-203ENST00000467533 PTERQ96BW5 349 aa9.94□□□□□ -0.82
HDAC3-203ENST00000467533 LHPPQ9H008 270 aa9.94□□□□□ -0.82
HDAC3-203ENST00000467533 CXXC4Q9H2H0 198 aa9.94□□□□□ -0.82
HDAC3-203ENST00000467533 NT5MQ9NPB1 228 aa9.94□□□□□ -0.82
HDAC3-203ENST00000467533 IMP3Q9NV31 184 aaKnown RBP9.94□□□□□ -0.82
HDAC3-203ENST00000467533 DTLQ9NZJ0 730 aa9.94□□□□□ -0.82
HDAC3-203ENST00000467533 TINAGQ9UJW2 476 aa9.94□□□□□ -0.82
HDAC3-203ENST00000467533 SERTAD3Q9UJW9 196 aa9.94□□□□□ -0.82
HDAC3-203ENST00000467533 MAN1B1Q9UKM7 699 aa9.94□□□□□ -0.82
HDAC3-203ENST00000467533 PSMD13Q9UNM6 376 aa9.94□□□□□ -0.82
HDAC3-203ENST00000467533 CDYLQ9Y232 598 aa9.94□□□□□ -0.82
HDAC3-203ENST00000467533 CHKBQ9Y259 395 aa9.94□□□□□ -0.82
HDAC3-203ENST00000467533 ACANP16112 2415 aa9.94□□□□□ -0.82
HDAC3-203ENST00000467533 FLNAP21333 2647 aaKnown RBP9.93□□□□□ -0.82
HDAC3-203ENST00000467533 MAP3K7O43318 606 aa9.93□□□□□ -0.82
HDAC3-203ENST00000467533 PEX11BO96011 259 aa9.93□□□□□ -0.82
HDAC3-203ENST00000467533 HSP90AA1P07900 732 aaKnown RBP9.93□□□□□ -0.82
HDAC3-203ENST00000467533 UMODP07911 640 aa9.93□□□□□ -0.82
HDAC3-203ENST00000467533 FOSL1P15407 271 aa9.93□□□□□ -0.82
HDAC3-203ENST00000467533 MST1P26927 711 aa9.93□□□□□ -0.82
HDAC3-203ENST00000467533 LMAN1P49257 510 aa9.93□□□□□ -0.82
HDAC3-203ENST00000467533 ZNF143P52747 638 aaPredicted RBP9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms