RNA–Protein interactions for RNA: ENST00000465282.5

USP39-211, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-211ENST00000465282 GSDMBQ8TAX9 411 aa16.64■□□□□ 0.25
USP39-211ENST00000465282 MAPK15Q8TD08 544 aa16.64■□□□□ 0.25
USP39-211ENST00000465282 CFAP36Q96G28 342 aa16.64■□□□□ 0.25
USP39-211ENST00000465282 PANX3Q96QZ0 392 aa16.64■□□□□ 0.25
USP39-211ENST00000465282 P2RY12Q9H244 342 aa16.64■□□□□ 0.25
USP39-211ENST00000465282 STN1Q9H668 368 aaKnown RBP16.64■□□□□ 0.25
USP39-211ENST00000465282 SAYSD1Q9NPB0 183 aa16.64■□□□□ 0.25
USP39-211ENST00000465282 SIRPGQ9P1W8 387 aa16.64■□□□□ 0.25
USP39-211ENST00000465282 DNAJC16Q9Y2G8 782 aa16.64■□□□□ 0.25
USP39-211ENST00000465282 COMMD10Q9Y6G5 202 aa16.64■□□□□ 0.25
USP39-211ENST00000465282 U3KQA8 63 aa16.64■□□□□ 0.25
USP39-211ENST00000465282 ASXL3Q9C0F0 2248 aa16.64■□□□□ 0.25
USP39-211ENST00000465282 RP1P56715 2156 aa16.63■□□□□ 0.25
USP39-211ENST00000465282 SPAARA0A1B0GVQ0 90 aa16.63■□□□□ 0.25
USP39-211ENST00000465282 LIN7AO14910 233 aaPredicted RBP16.63■□□□□ 0.25
USP39-211ENST00000465282 KPNA5O15131 536 aa16.63■□□□□ 0.25
USP39-211ENST00000465282 SNX2O60749 519 aa16.63■□□□□ 0.25
USP39-211ENST00000465282 SPAG6O75602 509 aa16.63■□□□□ 0.25
USP39-211ENST00000465282 RFPL3O75679 317 aa16.63■□□□□ 0.25
USP39-211ENST00000465282 S1PR4O95977 384 aa16.63■□□□□ 0.25
USP39-211ENST00000465282 XRCC1P18887 633 aaPredicted RBP16.63■□□□□ 0.25
USP39-211ENST00000465282 GPR3P46089 330 aa16.63■□□□□ 0.25
USP39-211ENST00000465282 HP1BP3Q5SSJ5 553 aaPredicted RBP16.63■□□□□ 0.25
USP39-211ENST00000465282 PTRHD1Q6GMV3 140 aaKnown RBP16.63■□□□□ 0.25
USP39-211ENST00000465282 LDB1Q86U70 411 aaPredicted RBP16.63■□□□□ 0.25
USP39-211ENST00000465282 SLC9B2Q86UD5 537 aa16.63■□□□□ 0.25
USP39-211ENST00000465282 RELL1Q8IUW5 271 aa16.63■□□□□ 0.25
USP39-211ENST00000465282 CFAP206Q8IYR0 622 aa16.63■□□□□ 0.25
USP39-211ENST00000465282 ARL14Q8N4G2 192 aa16.63■□□□□ 0.25
USP39-211ENST00000465282 WDR48Q8TAF3 677 aa16.63■□□□□ 0.25
USP39-211ENST00000465282 LPGAT1Q92604 370 aa16.63■□□□□ 0.25
USP39-211ENST00000465282 SH3KBP1Q96B97 665 aa16.63■□□□□ 0.25
USP39-211ENST00000465282 CCDC97Q96F63 343 aaPredicted RBP16.63■□□□□ 0.25
USP39-211ENST00000465282 WDR83Q9BRX9 315 aaKnown RBP16.63■□□□□ 0.25
USP39-211ENST00000465282 SARS2Q9NP81 518 aaKnown RBP16.63■□□□□ 0.25
USP39-211ENST00000465282 PRDM8Q9NQV8 689 aa16.63■□□□□ 0.25
USP39-211ENST00000465282 TOR4AQ9NXH8 423 aa16.63■□□□□ 0.25
USP39-211ENST00000465282 MOCS1Q9NZB8 636 aa16.63■□□□□ 0.25
USP39-211ENST00000465282 FBXO5Q9UKT4 447 aa16.63■□□□□ 0.25
USP39-211ENST00000465282 PRSS21Q9Y6M0 314 aa16.63■□□□□ 0.25
USP39-211ENST00000465282 UBA6A0AVT1 1052 aaPredicted RBP16.62■□□□□ 0.25
USP39-211ENST00000465282 CPED1A4D0V7 1026 aa16.62■□□□□ 0.25
USP39-211ENST00000465282 PDZK1P1A8MUH7 402 aa16.62■□□□□ 0.25
USP39-211ENST00000465282 FTH1P19P0C7X4 201 aa16.62■□□□□ 0.25
USP39-211ENST00000465282 ERVK-10P10266 1014 aa16.62■□□□□ 0.25
USP39-211ENST00000465282 PBLDP30039 288 aaPredicted RBP16.62■□□□□ 0.25
USP39-211ENST00000465282 MAGEA4P43358 317 aa16.62■□□□□ 0.25
USP39-211ENST00000465282 LEPRP48357 1165 aaKnown RBP16.62■□□□□ 0.25
USP39-211ENST00000465282 DNAJC3Q13217 504 aa16.62■□□□□ 0.25
USP39-211ENST00000465282 BIRC2Q13490 618 aa16.62■□□□□ 0.25
USP39-211ENST00000465282 NFE2L1Q14494 772 aa16.62■□□□□ 0.25
USP39-211ENST00000465282 FASTKD3Q14CZ7 662 aaKnown RBP16.62■□□□□ 0.25
USP39-211ENST00000465282 ZNF658BQ4V348 819 aaPredicted RBP16.62■□□□□ 0.25
USP39-211ENST00000465282 MICALCLQ6ZW33 695 aa16.62■□□□□ 0.25
USP39-211ENST00000465282 EFL1Q7Z2Z2 1120 aaKnown RBP16.62■□□□□ 0.25
USP39-211ENST00000465282 ZNF438Q7Z4V0 828 aa16.62■□□□□ 0.25
USP39-211ENST00000465282 CCDC25Q86WR0 208 aa16.62■□□□□ 0.25
USP39-211ENST00000465282 RBM12BQ8IXT5 1001 aaKnown RBP16.62■□□□□ 0.25
USP39-211ENST00000465282 EIF1ADQ8N9N8 165 aaKnown RBP16.62■□□□□ 0.25
USP39-211ENST00000465282 C2CD4AQ8NCU7 369 aaPredicted RBP16.62■□□□□ 0.25
USP39-211ENST00000465282 IFI44Q8TCB0 444 aa16.62■□□□□ 0.25
USP39-211ENST00000465282 IFT81Q8WYA0 676 aa16.62■□□□□ 0.25
USP39-211ENST00000465282 FMO2Q99518 471 aa16.62■□□□□ 0.25
USP39-211ENST00000465282 COG4Q9H9E3 785 aa16.62■□□□□ 0.25
USP39-211ENST00000465282 PLAC1Q9HBJ0 212 aa16.62■□□□□ 0.25
USP39-211ENST00000465282 PPANQ9NQ55 473 aaKnown RBP16.62■□□□□ 0.25
USP39-211ENST00000465282 IARS2Q9NSE4 1012 aaKnown RBP16.62■□□□□ 0.25
USP39-211ENST00000465282 NSMCE4AQ9NXX6 385 aa16.62■□□□□ 0.25
USP39-211ENST00000465282 IL1RAPL1Q9NZN1 696 aa16.62■□□□□ 0.25
USP39-211ENST00000465282 EML2O95834 649 aa16.61■□□□□ 0.25
USP39-211ENST00000465282 SLC35G4P0C7Q5 338 aa16.61■□□□□ 0.25
USP39-211ENST00000465282 RPL10P27635 214 aaKnown RBP16.61■□□□□ 0.25
USP39-211ENST00000465282 SLC1A2P43004 574 aa16.61■□□□□ 0.25
USP39-211ENST00000465282 CD151P48509 253 aa16.61■□□□□ 0.25
USP39-211ENST00000465282 EIF3BP55884 814 aaKnown RBP16.61■□□□□ 0.25
USP39-211ENST00000465282 MGAT5Q09328 741 aa16.61■□□□□ 0.25
USP39-211ENST00000465282 CTBP1Q13363 440 aa16.61■□□□□ 0.25
USP39-211ENST00000465282 NR1D2Q14995 579 aa16.61■□□□□ 0.25
USP39-211ENST00000465282 TEDDM1Q5T9Z0 273 aa16.61■□□□□ 0.25
USP39-211ENST00000465282 GUSBP11Q6P575 273 aa16.61■□□□□ 0.25
USP39-211ENST00000465282 FAM83HQ6ZRV2 1179 aaPredicted RBP16.61■□□□□ 0.25
USP39-211ENST00000465282 SLCO6A1Q86UG4 719 aa16.61■□□□□ 0.25
USP39-211ENST00000465282 DENND6AQ8IWF6 608 aa16.61■□□□□ 0.25
USP39-211ENST00000465282 PNPLA1Q8N8W4 532 aa16.61■□□□□ 0.25
USP39-211ENST00000465282 SLC37A2Q8TED4 501 aa16.61■□□□□ 0.25
USP39-211ENST00000465282 ZFPM2Q8WW38 1151 aa16.61■□□□□ 0.25
USP39-211ENST00000465282 ASZ1Q8WWH4 475 aa16.61■□□□□ 0.25
USP39-211ENST00000465282 ADAMTS14Q8WXS8 1223 aa16.61■□□□□ 0.25
USP39-211ENST00000465282 ELMO1Q92556 727 aa16.61■□□□□ 0.25
USP39-211ENST00000465282 BIRC8Q96P09 236 aa16.61■□□□□ 0.25
USP39-211ENST00000465282 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.61■□□□□ 0.25
USP39-211ENST00000465282 CCDC68Q9H2F9 335 aa16.61■□□□□ 0.25
USP39-211ENST00000465282 UCK1Q9HA47 277 aa16.61■□□□□ 0.25
USP39-211ENST00000465282 LRIT1Q9P2V4 623 aa16.61■□□□□ 0.25
USP39-211ENST00000465282 CPNE7Q9UBL6 633 aa16.61■□□□□ 0.25
USP39-211ENST00000465282 HEBP2Q9Y5Z4 205 aa16.61■□□□□ 0.25
USP39-211ENST00000465282 RHPN2P1A8MT19 583 aa16.6■□□□□ 0.25
USP39-211ENST00000465282 APOA4P06727 396 aa16.6■□□□□ 0.25
USP39-211ENST00000465282 RHOXF2BP0C7M4 288 aa16.6■□□□□ 0.25
USP39-211ENST00000465282 PKMP14618 531 aaKnown RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms