RNA–Protein interactions for RNA: ENST00000463818.1

SF3A1-205, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-205ENST00000463818 SPARCL1Q14515 664 aa18.46■□□□□ 0.55
SF3A1-205ENST00000463818 DENND5AQ6IQ26 1287 aa18.46■□□□□ 0.55
SF3A1-205ENST00000463818 BORAQ6PGQ7 559 aa18.46■□□□□ 0.55
SF3A1-205ENST00000463818 GPR150Q8NGU9 434 aa18.46■□□□□ 0.55
SF3A1-205ENST00000463818 NAT14Q8WUY8 206 aa18.46■□□□□ 0.55
SF3A1-205ENST00000463818 KLHL6Q8WZ60 621 aa18.46■□□□□ 0.55
SF3A1-205ENST00000463818 ELMO2Q96JJ3 720 aa18.46■□□□□ 0.55
SF3A1-205ENST00000463818 INSM2Q96T92 566 aaPredicted RBP18.46■□□□□ 0.55
SF3A1-205ENST00000463818 RAB33BQ9H082 229 aa18.46■□□□□ 0.55
SF3A1-205ENST00000463818 AMFRQ9UKV5 643 aa18.46■□□□□ 0.55
SF3A1-205ENST00000463818 PYCARD-AS1I3L0S3 204 aa18.45■□□□□ 0.54
SF3A1-205ENST00000463818 CRTAMO95727 393 aa18.45■□□□□ 0.54
SF3A1-205ENST00000463818 ZNF28P17035 718 aa18.45■□□□□ 0.54
SF3A1-205ENST00000463818 TMPRSS15P98073 1019 aa18.45■□□□□ 0.54
SF3A1-205ENST00000463818 MAP7Q14244 749 aa18.45■□□□□ 0.54
SF3A1-205ENST00000463818 IL11RAQ14626 422 aa18.45■□□□□ 0.54
SF3A1-205ENST00000463818 C6orf15Q6UXA7 325 aaPredicted RBP18.45■□□□□ 0.54
SF3A1-205ENST00000463818 PRICKLE2Q7Z3G6 844 aa18.45■□□□□ 0.54
SF3A1-205ENST00000463818 KIAA1328Q86T90 577 aa18.45■□□□□ 0.54
SF3A1-205ENST00000463818 ESX1Q8N693 406 aa18.45■□□□□ 0.54
SF3A1-205ENST00000463818 OR13C4Q8NGS5 318 aa18.45■□□□□ 0.54
SF3A1-205ENST00000463818 TBL1YQ9BQ87 522 aa18.45■□□□□ 0.54
SF3A1-205ENST00000463818 ULBP3Q9BZM4 244 aa18.45■□□□□ 0.54
SF3A1-205ENST00000463818 CFAP20Q9Y6A4 193 aaKnown RBP18.45■□□□□ 0.54
SF3A1-205ENST00000463818 PRKAR1AP10644 381 aa18.44■□□□□ 0.54
SF3A1-205ENST00000463818 PPP1CAP62136 330 aa18.44■□□□□ 0.54
SF3A1-205ENST00000463818 NFKB2Q00653 900 aa18.44■□□□□ 0.54
SF3A1-205ENST00000463818 PDE1BQ01064 536 aa18.44■□□□□ 0.54
SF3A1-205ENST00000463818 KLHL35Q6PF15 583 aa18.44■□□□□ 0.54
SF3A1-205ENST00000463818 PEX26Q7Z412 305 aa18.44■□□□□ 0.54
SF3A1-205ENST00000463818 RASGRP3Q8IV61 690 aa18.44■□□□□ 0.54
SF3A1-205ENST00000463818 OR2L2Q8NH16 312 aa18.44■□□□□ 0.54
SF3A1-205ENST00000463818 DCUN1D1Q96GG9 259 aa18.44■□□□□ 0.54
SF3A1-205ENST00000463818 CATSPER2Q96P56 530 aa18.44■□□□□ 0.54
SF3A1-205ENST00000463818 PPP1R2P1Q96PQ5 205 aa18.44■□□□□ 0.54
SF3A1-205ENST00000463818 BAG1Q99933 345 aaPredicted RBP18.44■□□□□ 0.54
SF3A1-205ENST00000463818 WWP1Q9H0M0 922 aa18.44■□□□□ 0.54
SF3A1-205ENST00000463818 SLC25A18Q9H1K4 315 aa18.44■□□□□ 0.54
SF3A1-205ENST00000463818 FAM96AQ9H5X1 160 aa18.44■□□□□ 0.54
SF3A1-205ENST00000463818 ARNT2Q9HBZ2 717 aa18.44■□□□□ 0.54
SF3A1-205ENST00000463818 IMP3Q9NV31 184 aaKnown RBP18.44■□□□□ 0.54
SF3A1-205ENST00000463818 SEMA5BQ9P283 1151 aa18.44■□□□□ 0.54
SF3A1-205ENST00000463818 FAM8A1Q9UBU6 413 aa18.44■□□□□ 0.54
SF3A1-205ENST00000463818 ACSL5Q9ULC5 683 aa18.44■□□□□ 0.54
SF3A1-205ENST00000463818 RPS6KL1Q9Y6S9 549 aa18.44■□□□□ 0.54
SF3A1-205ENST00000463818 IGHV5-51A0A0C4DH38 117 aa18.43■□□□□ 0.54
SF3A1-205ENST00000463818 AGAP14A8MT82 685 aa18.43■□□□□ 0.54
SF3A1-205ENST00000463818 SGTAO43765 313 aa18.43■□□□□ 0.54
SF3A1-205ENST00000463818 SPAG6O75602 509 aa18.43■□□□□ 0.54
SF3A1-205ENST00000463818 KIAA0754O94854 1291 aa18.43■□□□□ 0.54
SF3A1-205ENST00000463818 POLBP06746 335 aa18.43■□□□□ 0.54
SF3A1-205ENST00000463818 MTHFD1P11586 935 aaKnown RBP18.43■□□□□ 0.54
SF3A1-205ENST00000463818 FGF5P12034 268 aa18.43■□□□□ 0.54
SF3A1-205ENST00000463818 NELFEP18615 380 aaKnown RBP18.43■□□□□ 0.54
SF3A1-205ENST00000463818 STAT5AP42229 794 aa18.43■□□□□ 0.54
SF3A1-205ENST00000463818 CCR10P46092 362 aa18.43■□□□□ 0.54
SF3A1-205ENST00000463818 PLCL1Q15111 1095 aa18.43■□□□□ 0.54
SF3A1-205ENST00000463818 PARP6Q2NL67 630 aa18.43■□□□□ 0.54
SF3A1-205ENST00000463818 BCL7AQ4VC05 210 aa18.43■□□□□ 0.54
SF3A1-205ENST00000463818 CFAP206Q8IYR0 622 aa18.43■□□□□ 0.54
SF3A1-205ENST00000463818 FAM71DQ8N9W8 422 aa18.43■□□□□ 0.54
SF3A1-205ENST00000463818 GALNT6Q8NCL4 622 aa18.43■□□□□ 0.54
SF3A1-205ENST00000463818 SPDYE1Q8NFV5 336 aaPredicted RBP18.43■□□□□ 0.54
SF3A1-205ENST00000463818 UBXN4Q92575 508 aa18.43■□□□□ 0.54
SF3A1-205ENST00000463818 LINC00615Q96LM1 132 aaPredicted RBP18.43■□□□□ 0.54
SF3A1-205ENST00000463818 C12orf66Q96MD2 445 aa18.43■□□□□ 0.54
SF3A1-205ENST00000463818 ADNPQ9H2P0 1102 aa18.43■□□□□ 0.54
SF3A1-205ENST00000463818 CRLS1Q9UJA2 301 aa18.43■□□□□ 0.54
SF3A1-205ENST00000463818 KLHL33A6NCF5 533 aa18.42■□□□□ 0.54
SF3A1-205ENST00000463818 GOLGA6L9A6NEM1 432 aa18.42■□□□□ 0.54
SF3A1-205ENST00000463818 ZNF189O75820 626 aaPredicted RBP18.42■□□□□ 0.54
SF3A1-205ENST00000463818 PTMAP06454 111 aaKnown RBP18.42■□□□□ 0.54
SF3A1-205ENST00000463818 RALBP11234 206 aa18.42■□□□□ 0.54
SF3A1-205ENST00000463818 F8A1P23610 371 aa18.42■□□□□ 0.54
SF3A1-205ENST00000463818 ZNF140P52738 457 aaPredicted RBP18.42■□□□□ 0.54
SF3A1-205ENST00000463818 POLE2P56282 527 aa18.42■□□□□ 0.54
SF3A1-205ENST00000463818 C16orf46Q6P387 395 aa18.42■□□□□ 0.54
SF3A1-205ENST00000463818 ARHGEF18Q6ZSZ5 1173 aa18.42■□□□□ 0.54
SF3A1-205ENST00000463818 KLHDC8BQ8IXV7 354 aa18.42■□□□□ 0.54
SF3A1-205ENST00000463818 UBL4BQ8N7F7 174 aa18.42■□□□□ 0.54
SF3A1-205ENST00000463818 SIDT2Q8NBJ9 832 aaKnown RBP18.42■□□□□ 0.54
SF3A1-205ENST00000463818 TTC13Q8NBP0 860 aa18.42■□□□□ 0.54
SF3A1-205ENST00000463818 ZFPM2Q8WW38 1151 aa18.42■□□□□ 0.54
SF3A1-205ENST00000463818 STARD8Q92502 1023 aa18.42■□□□□ 0.54
SF3A1-205ENST00000463818 ULK4Q96C45 1275 aa18.42■□□□□ 0.54
SF3A1-205ENST00000463818 LRRC45Q96CN5 670 aa18.42■□□□□ 0.54
SF3A1-205ENST00000463818 SLC41A2Q96JW4 573 aa18.42■□□□□ 0.54
SF3A1-205ENST00000463818 MAP3K3Q99759 626 aa18.42■□□□□ 0.54
SF3A1-205ENST00000463818 HRASLS2Q9NWW9 162 aa18.42■□□□□ 0.54
SF3A1-205ENST00000463818 FEZ2Q9UHY8 353 aaPredicted RBP18.42■□□□□ 0.54
SF3A1-205ENST00000463818 PACSIN2Q9UNF0 486 aaPredicted RBP18.42■□□□□ 0.54
SF3A1-205ENST00000463818 A0A0U1RQJ8 604 aa18.41■□□□□ 0.54
SF3A1-205ENST00000463818 CCL22O00626 93 aa18.41■□□□□ 0.54
SF3A1-205ENST00000463818 DDX3YO15523 660 aaKnown RBP18.41■□□□□ 0.54
SF3A1-205ENST00000463818 LDB2O43679 373 aa18.41■□□□□ 0.54
SF3A1-205ENST00000463818 METTL18O95568 372 aa18.41■□□□□ 0.54
SF3A1-205ENST00000463818 FOLR1P15328 257 aa18.41■□□□□ 0.54
SF3A1-205ENST00000463818 TPH1P17752 444 aa18.41■□□□□ 0.54
SF3A1-205ENST00000463818 TCN2P20062 427 aa18.41■□□□□ 0.54
SF3A1-205ENST00000463818 ITGALP20701 1170 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms