RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 HOXB3P14651 431 aaPredicted RBP17.33■□□□□ 0.36
VPS52-214ENST00000463486 PBLDP30039 288 aaPredicted RBP17.33■□□□□ 0.36
VPS52-214ENST00000463486 RTP5Q14D33 572 aa17.33■□□□□ 0.36
VPS52-214ENST00000463486 RPE65Q16518 533 aa17.33■□□□□ 0.36
VPS52-214ENST00000463486 FASTKD1Q53R41 847 aaKnown RBP17.33■□□□□ 0.36
VPS52-214ENST00000463486 NKAIN2Q5VXU1 208 aa17.33■□□□□ 0.36
VPS52-214ENST00000463486 CAPRIN2Q6IMN6 1127 aaKnown RBP17.33■□□□□ 0.36
VPS52-214ENST00000463486 PCGF5Q86SE9 256 aa17.33■□□□□ 0.36
VPS52-214ENST00000463486 IGDCC3Q8IVU1 814 aa17.33■□□□□ 0.36
VPS52-214ENST00000463486 CFAP206Q8IYR0 622 aa17.33■□□□□ 0.36
VPS52-214ENST00000463486 SPDYE1Q8NFV5 336 aaPredicted RBP17.33■□□□□ 0.36
VPS52-214ENST00000463486 GPR150Q8NGU9 434 aa17.33■□□□□ 0.36
VPS52-214ENST00000463486 ATXN7L3BQ96GX2 97 aa17.33■□□□□ 0.36
VPS52-214ENST00000463486 PWWP2AQ96N64 755 aa17.33■□□□□ 0.36
VPS52-214ENST00000463486 INSM2Q96T92 566 aaPredicted RBP17.33■□□□□ 0.36
VPS52-214ENST00000463486 WDR83Q9BRX9 315 aaKnown RBP17.33■□□□□ 0.36
VPS52-214ENST00000463486 NRSN2Q9GZP1 204 aa17.33■□□□□ 0.36
VPS52-214ENST00000463486 P2RY12Q9H244 342 aa17.33■□□□□ 0.36
VPS52-214ENST00000463486 RDH14Q9HBH5 336 aa17.33■□□□□ 0.36
VPS52-214ENST00000463486 ACSL5Q9ULC5 683 aa17.33■□□□□ 0.36
VPS52-214ENST00000463486 PSMD13Q9UNM6 376 aa17.33■□□□□ 0.36
VPS52-214ENST00000463486 KIF26BQ2KJY2 2108 aa17.33■□□□□ 0.36
VPS52-214ENST00000463486 GOLGA8KD6RF30 607 aa17.32■□□□□ 0.36
VPS52-214ENST00000463486 GOLGA8TH3BQL2 631 aa17.32■□□□□ 0.36
VPS52-214ENST00000463486 BANF1O75531 89 aa17.32■□□□□ 0.36
VPS52-214ENST00000463486 CPNE6O95741 557 aa17.32■□□□□ 0.36
VPS52-214ENST00000463486 CSF2RBP32927 897 aa17.32■□□□□ 0.36
VPS52-214ENST00000463486 CBLBQ13191 982 aa17.32■□□□□ 0.36
VPS52-214ENST00000463486 MORF4L2Q15014 288 aa17.32■□□□□ 0.36
VPS52-214ENST00000463486 CLPPQ16740 277 aaPredicted RBP17.32■□□□□ 0.36
VPS52-214ENST00000463486 TMEM26Q6ZUK4 368 aa17.32■□□□□ 0.36
VPS52-214ENST00000463486 USP53Q70EK8 1073 aa17.32■□□□□ 0.36
VPS52-214ENST00000463486 KDF1Q8NAX2 398 aaPredicted RBP17.32■□□□□ 0.36
VPS52-214ENST00000463486 HM13Q8TCT9 377 aa17.32■□□□□ 0.36
VPS52-214ENST00000463486 GRAMD1AQ96CP6 724 aa17.32■□□□□ 0.36
VPS52-214ENST00000463486 PRR11Q96HE9 360 aaPredicted RBP17.32■□□□□ 0.36
VPS52-214ENST00000463486 RMDN2Q96LZ7 410 aa17.32■□□□□ 0.36
VPS52-214ENST00000463486 NUDT22Q9BRQ3 303 aa17.32■□□□□ 0.36
VPS52-214ENST00000463486 TBC1D10AQ9BXI6 508 aa17.32■□□□□ 0.36
VPS52-214ENST00000463486 WWP1Q9H0M0 922 aa17.32■□□□□ 0.36
VPS52-214ENST00000463486 OR52A5Q9H2C5 316 aa17.32■□□□□ 0.36
VPS52-214ENST00000463486 OGFRQ9NZT2 677 aa17.32■□□□□ 0.36
VPS52-214ENST00000463486 PDP2Q9P2J9 529 aa17.32■□□□□ 0.36
VPS52-214ENST00000463486 DKK4Q9UBT3 224 aa17.32■□□□□ 0.36
VPS52-214ENST00000463486 CDC23Q9UJX2 597 aa17.32■□□□□ 0.36
VPS52-214ENST00000463486 ACACAQ13085 2346 aa17.32■□□□□ 0.36
VPS52-214ENST00000463486 DSPP15924 2871 aaKnown RBP17.32■□□□□ 0.36
VPS52-214ENST00000463486 KMT2BQ9UMN6 2715 aaPredicted RBP17.32■□□□□ 0.36
VPS52-214ENST00000463486 PMS2P1A4D2B8 440 aa17.31■□□□□ 0.36
VPS52-214ENST00000463486 LILRA5A6NI73 299 aa17.31■□□□□ 0.36
VPS52-214ENST00000463486 RAD51CO43502 376 aa17.31■□□□□ 0.36
VPS52-214ENST00000463486 PROS1P07225 676 aa17.31■□□□□ 0.36
VPS52-214ENST00000463486 GSTM1P09488 218 aa17.31■□□□□ 0.36
VPS52-214ENST00000463486 PDHA2P29803 388 aa17.31■□□□□ 0.36
VPS52-214ENST00000463486 CCKBRP32239 447 aa17.31■□□□□ 0.36
VPS52-214ENST00000463486 RPL21P46778 160 aaKnown RBP17.31■□□□□ 0.36
VPS52-214ENST00000463486 GPLD1P80108 840 aa17.31■□□□□ 0.36
VPS52-214ENST00000463486 GSTM4Q03013 218 aa17.31■□□□□ 0.36
VPS52-214ENST00000463486 C2orf54Q08AI8 447 aa17.31■□□□□ 0.36
VPS52-214ENST00000463486 TYSND1Q2T9J0 566 aa17.31■□□□□ 0.36
VPS52-214ENST00000463486 AMZ1Q400G9 498 aa17.31■□□□□ 0.36
VPS52-214ENST00000463486 CENPUQ71F23 418 aa17.31■□□□□ 0.36
VPS52-214ENST00000463486 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.31■□□□□ 0.36
VPS52-214ENST00000463486 SH3KBP1Q96B97 665 aa17.31■□□□□ 0.36
VPS52-214ENST00000463486 SLC38A3Q99624 504 aa17.31■□□□□ 0.36
VPS52-214ENST00000463486 FOXP3Q9BZS1 431 aa17.31■□□□□ 0.36
VPS52-214ENST00000463486 SEMA6CQ9H3T2 930 aa17.31■□□□□ 0.36
VPS52-214ENST00000463486 COG4Q9H9E3 785 aa17.31■□□□□ 0.36
VPS52-214ENST00000463486 POT1Q9NUX5 634 aa17.31■□□□□ 0.36
VPS52-214ENST00000463486 KCNK4Q9NYG8 393 aa17.31■□□□□ 0.36
VPS52-214ENST00000463486 IL1RAPL1Q9NZN1 696 aa17.31■□□□□ 0.36
VPS52-214ENST00000463486 TMEM9Q9P0T7 183 aa17.31■□□□□ 0.36
VPS52-214ENST00000463486 RPS6KL1Q9Y6S9 549 aa17.31■□□□□ 0.36
VPS52-214ENST00000463486 SLC5A10A0PJK1 596 aa17.3■□□□□ 0.36
VPS52-214ENST00000463486 TAF4O00268 1085 aa17.3■□□□□ 0.36
VPS52-214ENST00000463486 USP1O94782 785 aa17.3■□□□□ 0.36
VPS52-214ENST00000463486 VIPP01282 170 aa17.3■□□□□ 0.36
VPS52-214ENST00000463486 POLBP06746 335 aa17.3■□□□□ 0.36
VPS52-214ENST00000463486 MTHFD1P11586 935 aaKnown RBP17.3■□□□□ 0.36
VPS52-214ENST00000463486 TTPAP49638 278 aa17.3■□□□□ 0.36
VPS52-214ENST00000463486 ITGA8P53708 1063 aa17.3■□□□□ 0.36
VPS52-214ENST00000463486 EPHA4P54764 986 aa17.3■□□□□ 0.36
VPS52-214ENST00000463486 DHX9Q08211 1270 aaKnown RBP17.3■□□□□ 0.36
VPS52-214ENST00000463486 GPR18Q14330 331 aa17.3■□□□□ 0.36
VPS52-214ENST00000463486 AARS2Q5JTZ9 985 aaKnown RBP17.3■□□□□ 0.36
VPS52-214ENST00000463486 NEPROQ6NW34 567 aa17.3■□□□□ 0.36
VPS52-214ENST00000463486 CASC4Q6P4E1 433 aa17.3■□□□□ 0.36
VPS52-214ENST00000463486 PIM3Q86V86 326 aa17.3■□□□□ 0.36
VPS52-214ENST00000463486 UNC5BQ8IZJ1 945 aa17.3■□□□□ 0.36
VPS52-214ENST00000463486 AVL9Q8NBF6 648 aa17.3■□□□□ 0.36
VPS52-214ENST00000463486 MDM1Q8TC05 714 aa17.3■□□□□ 0.36
VPS52-214ENST00000463486 LKAAEAR1Q8TD35 194 aa17.3■□□□□ 0.36
VPS52-214ENST00000463486 LPGAT1Q92604 370 aa17.3■□□□□ 0.36
VPS52-214ENST00000463486 SNF8Q96H20 258 aa17.3■□□□□ 0.36
VPS52-214ENST00000463486 BIRC8Q96P09 236 aa17.3■□□□□ 0.36
VPS52-214ENST00000463486 EBNA1BP2Q99848 306 aaKnown RBP17.3■□□□□ 0.36
VPS52-214ENST00000463486 ERP44Q9BS26 406 aa17.3■□□□□ 0.36
VPS52-214ENST00000463486 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.3■□□□□ 0.36
VPS52-214ENST00000463486 TRIM31Q9BZY9 425 aa17.3■□□□□ 0.36
VPS52-214ENST00000463486 SYNDIG1Q9H7V2 258 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms