RNA–Protein interactions for RNA: ENST00000463244.6

CPSF7-209, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-209ENST00000463244 INPP5JQ15735 1006 aaPredicted RBP20.25■□□□□ 0.83
CPSF7-209ENST00000463244 GPR19Q15760 415 aa20.25■□□□□ 0.83
CPSF7-209ENST00000463244 TEX44Q53QW1 395 aa20.25■□□□□ 0.83
CPSF7-209ENST00000463244 ZDHHC20Q5W0Z9 365 aa20.25■□□□□ 0.83
CPSF7-209ENST00000463244 NPNTQ6UXI9 565 aa20.25■□□□□ 0.83
CPSF7-209ENST00000463244 H2AFVQ71UI9 128 aa20.25■□□□□ 0.83
CPSF7-209ENST00000463244 DDHD1Q8NEL9 900 aa20.25■□□□□ 0.83
CPSF7-209ENST00000463244 CPLX3Q8WVH0 158 aa20.25■□□□□ 0.83
CPSF7-209ENST00000463244 CHST8Q9H2A9 424 aa20.25■□□□□ 0.83
CPSF7-209ENST00000463244 TRABDQ9H4I3 376 aa20.25■□□□□ 0.83
CPSF7-209ENST00000463244 CAPN11Q9UMQ6 739 aa20.25■□□□□ 0.83
CPSF7-209ENST00000463244 CFAP20Q9Y6A4 193 aaKnown RBP20.25■□□□□ 0.83
CPSF7-209ENST00000463244 DNMT3AQ9Y6K1 912 aaPredicted RBP20.25■□□□□ 0.83
CPSF7-209ENST00000463244 A0A0A6YYK5 440 aaPredicted RBP20.24■□□□□ 0.83
CPSF7-209ENST00000463244 APOL1O14791 398 aa20.24■□□□□ 0.83
CPSF7-209ENST00000463244 GPR39O43194 453 aa20.24■□□□□ 0.83
CPSF7-209ENST00000463244 ZBTB11O95625 1053 aaPredicted RBP20.24■□□□□ 0.83
CPSF7-209ENST00000463244 SPAM1P38567 509 aa20.24■□□□□ 0.83
CPSF7-209ENST00000463244 IQCB1Q15051 598 aa20.24■□□□□ 0.83
CPSF7-209ENST00000463244 PRR30Q53SZ7 412 aaPredicted RBP20.24■□□□□ 0.83
CPSF7-209ENST00000463244 LDLRAP1Q5SW96 308 aa20.24■□□□□ 0.83
CPSF7-209ENST00000463244 METRNLQ641Q3 311 aa20.24■□□□□ 0.83
CPSF7-209ENST00000463244 JMJD6Q6NYC1 403 aaPredicted RBP20.24■□□□□ 0.83
CPSF7-209ENST00000463244 TMEM220Q6QAJ8 160 aa20.24■□□□□ 0.83
CPSF7-209ENST00000463244 OOSP2Q86WS3 158 aa20.24■□□□□ 0.83
CPSF7-209ENST00000463244 TTC30BQ8N4P2 665 aa20.24■□□□□ 0.83
CPSF7-209ENST00000463244 Q8NA96 180 aa20.24■□□□□ 0.83
CPSF7-209ENST00000463244 CTNNBL1Q8WYA6 563 aaPredicted RBP20.24■□□□□ 0.83
CPSF7-209ENST00000463244 LRFN5Q96NI6 719 aa20.24■□□□□ 0.83
CPSF7-209ENST00000463244 PACSIN1Q9BY11 444 aa20.24■□□□□ 0.83
CPSF7-209ENST00000463244 LATS2Q9NRM7 1088 aa20.24■□□□□ 0.83
CPSF7-209ENST00000463244 IMP3Q9NV31 184 aaKnown RBP20.24■□□□□ 0.83
CPSF7-209ENST00000463244 UBP1Q9NZI7 540 aa20.24■□□□□ 0.83
CPSF7-209ENST00000463244 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP20.24■□□□□ 0.83
CPSF7-209ENST00000463244 BTRCQ9Y297 605 aa20.24■□□□□ 0.83
CPSF7-209ENST00000463244 LOC285095A0A1B0GVY8 99 aa20.23■□□□□ 0.83
CPSF7-209ENST00000463244 OR2AG2A6NM03 316 aa20.23■□□□□ 0.83
CPSF7-209ENST00000463244 TCP11X1B4DZS4 312 aa20.23■□□□□ 0.83
CPSF7-209ENST00000463244 UGT1A9O60656 530 aa20.23■□□□□ 0.83
CPSF7-209ENST00000463244 DPM1O60762 260 aa20.23■□□□□ 0.83
CPSF7-209ENST00000463244 KLK3P07288 261 aaPredicted RBP20.23■□□□□ 0.83
CPSF7-209ENST00000463244 RAB40ALP0C0E4 278 aa20.23■□□□□ 0.83
CPSF7-209ENST00000463244 UGT1A6P19224 532 aa20.23■□□□□ 0.83
CPSF7-209ENST00000463244 UGT1A1P22309 533 aa20.23■□□□□ 0.83
CPSF7-209ENST00000463244 UGT1A4P22310 534 aa20.23■□□□□ 0.83
CPSF7-209ENST00000463244 PTPN3P26045 913 aa20.23■□□□□ 0.83
CPSF7-209ENST00000463244 CA5AP35218 305 aa20.23■□□□□ 0.83
CPSF7-209ENST00000463244 GSDMDP57764 484 aa20.23■□□□□ 0.83
CPSF7-209ENST00000463244 NOMO1Q15155 1222 aa20.23■□□□□ 0.83
CPSF7-209ENST00000463244 PLEKHS1Q5SXH7 462 aa20.23■□□□□ 0.83
CPSF7-209ENST00000463244 FAM151BQ6UXP7 276 aa20.23■□□□□ 0.83
CPSF7-209ENST00000463244 B4GALNT4Q76KP1 1039 aa20.23■□□□□ 0.83
CPSF7-209ENST00000463244 DSELQ8IZU8 1212 aa20.23■□□□□ 0.83
CPSF7-209ENST00000463244 CARFQ8N187 725 aa20.23■□□□□ 0.83
CPSF7-209ENST00000463244 ENDOVQ8N8Q3 282 aaKnown RBP20.23■□□□□ 0.83
CPSF7-209ENST00000463244 ZFPM2Q8WW38 1151 aa20.23■□□□□ 0.83
CPSF7-209ENST00000463244 TEKT5Q96M29 485 aa20.23■□□□□ 0.83
CPSF7-209ENST00000463244 INSM2Q96T92 566 aaPredicted RBP20.23■□□□□ 0.83
CPSF7-209ENST00000463244 MAK16Q9BXY0 300 aaKnown RBP20.23■□□□□ 0.83
CPSF7-209ENST00000463244 UGT1A7Q9HAW7 530 aa20.23■□□□□ 0.83
CPSF7-209ENST00000463244 UGT1A10Q9HAW8 530 aa20.23■□□□□ 0.83
CPSF7-209ENST00000463244 UGT1A8Q9HAW9 530 aa20.23■□□□□ 0.83
CPSF7-209ENST00000463244 IL17CQ9P0M4 197 aa20.23■□□□□ 0.83
CPSF7-209ENST00000463244 SNX7Q9UNH6 387 aa20.23■□□□□ 0.83
CPSF7-209ENST00000463244 LUC7L2Q9Y383 392 aaKnown RBP20.23■□□□□ 0.83
CPSF7-209ENST00000463244 TEP1Q99973 2627 aaKnown RBP20.23■□□□□ 0.83
CPSF7-209ENST00000463244 PIKFYVEQ9Y2I7 2098 aa20.22■□□□□ 0.83
CPSF7-209ENST00000463244 SSU72P8A0A1W2PR75 194 aa20.22■□□□□ 0.83
CPSF7-209ENST00000463244 A1L4Q6 167 aa20.22■□□□□ 0.83
CPSF7-209ENST00000463244 TMEM63AO94886 807 aa20.22■□□□□ 0.83
CPSF7-209ENST00000463244 DDAH2O95865 285 aa20.22■□□□□ 0.83
CPSF7-209ENST00000463244 ZFXP17010 805 aaPredicted RBP20.22■□□□□ 0.83
CPSF7-209ENST00000463244 MRPL49Q13405 166 aaKnown RBP20.22■□□□□ 0.83
CPSF7-209ENST00000463244 XRCC4Q13426 336 aa20.22■□□□□ 0.83
CPSF7-209ENST00000463244 PPP2R5EQ16537 467 aa20.22■□□□□ 0.83
CPSF7-209ENST00000463244 EIF2S3LQ2VIR3 472 aaKnown RBP20.22■□□□□ 0.83
CPSF7-209ENST00000463244 TMTC4Q5T4D3 741 aa20.22■□□□□ 0.83
CPSF7-209ENST00000463244 GPRC6AQ5T6X5 926 aa20.22■□□□□ 0.83
CPSF7-209ENST00000463244 PRAMEF17Q5VTA0 474 aa20.22■□□□□ 0.83
CPSF7-209ENST00000463244 LCN10Q6JVE6 187 aa20.22■□□□□ 0.83
CPSF7-209ENST00000463244 HPS6Q86YV9 775 aa20.22■□□□□ 0.83
CPSF7-209ENST00000463244 FDCSPQ8NFU4 85 aa20.22■□□□□ 0.83
CPSF7-209ENST00000463244 IQCDQ96DY2 449 aa20.22■□□□□ 0.83
CPSF7-209ENST00000463244 NUDT9Q9BW91 350 aa20.22■□□□□ 0.83
CPSF7-209ENST00000463244 NLNQ9BYT8 704 aa20.22■□□□□ 0.83
CPSF7-209ENST00000463244 SLAMF7Q9NQ25 335 aa20.22■□□□□ 0.83
CPSF7-209ENST00000463244 CASS4Q9NQ75 786 aa20.22■□□□□ 0.83
CPSF7-209ENST00000463244 LUZP4Q9P127 313 aa20.22■□□□□ 0.83
CPSF7-209ENST00000463244 FAM153AQ9UHL3 310 aa20.22■□□□□ 0.83
CPSF7-209ENST00000463244 TCFL5Q9UL49 500 aa20.22■□□□□ 0.83
CPSF7-209ENST00000463244 GLYATL1P3A0A0U1RQE8 302 aa20.21■□□□□ 0.83
CPSF7-209ENST00000463244 MEN1O00255 615 aa20.21■□□□□ 0.83
CPSF7-209ENST00000463244 GAPDHSO14556 408 aaPredicted RBP20.21■□□□□ 0.83
CPSF7-209ENST00000463244 PBLDP30039 288 aaPredicted RBP20.21■□□□□ 0.83
CPSF7-209ENST00000463244 CD68P34810 354 aaPredicted RBP20.21■□□□□ 0.83
CPSF7-209ENST00000463244 KPNA2P52292 529 aaKnown RBP20.21■□□□□ 0.83
CPSF7-209ENST00000463244 FANCCQ00597 558 aa20.21■□□□□ 0.83
CPSF7-209ENST00000463244 ITGA9Q13797 1035 aa20.21■□□□□ 0.83
CPSF7-209ENST00000463244 MESDQ14696 234 aa20.21■□□□□ 0.83
CPSF7-209ENST00000463244 SIRPB2Q5JXA9 342 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms