RNA–Protein interactions for RNA: ENST00000462125.5

C9orf3-210, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 961 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-210ENST00000462125 AMD1P17707 334 aa12.95□□□□□ -0.34
C9orf3-210ENST00000462125 TPH1P17752 444 aa12.95□□□□□ -0.34
C9orf3-210ENST00000462125 MAPK9P45984 424 aa12.95□□□□□ -0.34
C9orf3-210ENST00000462125 SRSF6Q13247 344 aaKnown RBP12.95□□□□□ -0.34
C9orf3-210ENST00000462125 GPR18Q14330 331 aa12.95□□□□□ -0.34
C9orf3-210ENST00000462125 NFE2L1Q14494 772 aa12.95□□□□□ -0.34
C9orf3-210ENST00000462125 RPE65Q16518 533 aa12.95□□□□□ -0.34
C9orf3-210ENST00000462125 SNAP47Q5SQN1 464 aa12.95□□□□□ -0.34
C9orf3-210ENST00000462125 FNBP1LQ5T0N5 605 aa12.95□□□□□ -0.34
C9orf3-210ENST00000462125 XKR5Q6UX68 686 aa12.95□□□□□ -0.34
C9orf3-210ENST00000462125 FAM129CQ86XR2 697 aa12.95□□□□□ -0.34
C9orf3-210ENST00000462125 NXPE1Q8N323 547 aa12.95□□□□□ -0.34
C9orf3-210ENST00000462125 ZFPM2Q8WW38 1151 aa12.95□□□□□ -0.34
C9orf3-210ENST00000462125 ULK4Q96C45 1275 aa12.95□□□□□ -0.34
C9orf3-210ENST00000462125 ZPBPQ9BS86 351 aa12.95□□□□□ -0.34
C9orf3-210ENST00000462125 NLE1Q9NVX2 485 aaPredicted RBP12.95□□□□□ -0.34
C9orf3-210ENST00000462125 ACSL5Q9ULC5 683 aa12.95□□□□□ -0.34
C9orf3-210ENST00000462125 IGLV3-16A0A075B6K0 115 aa12.94□□□□□ -0.34
C9orf3-210ENST00000462125 C17orf113A0A1B0GUU1 675 aa12.94□□□□□ -0.34
C9orf3-210ENST00000462125 MROH6A6NGR9 719 aa12.94□□□□□ -0.34
C9orf3-210ENST00000462125 EIF4E1BA6NMX2 242 aaKnown RBP12.94□□□□□ -0.34
C9orf3-210ENST00000462125 ERI2A8K979 691 aaKnown RBP12.94□□□□□ -0.34
C9orf3-210ENST00000462125 CAPN5O15484 640 aaPredicted RBP12.94□□□□□ -0.34
C9orf3-210ENST00000462125 ATP1B2P14415 290 aaPredicted RBP12.94□□□□□ -0.34
C9orf3-210ENST00000462125 ITGALP20701 1170 aa12.94□□□□□ -0.34
C9orf3-210ENST00000462125 AKT1P31749 480 aa12.94□□□□□ -0.34
C9orf3-210ENST00000462125 PPM1FP49593 454 aaPredicted RBP12.94□□□□□ -0.34
C9orf3-210ENST00000462125 GFERP55789 205 aa12.94□□□□□ -0.34
C9orf3-210ENST00000462125 TMPRSS15P98073 1019 aa12.94□□□□□ -0.34
C9orf3-210ENST00000462125 RPS6KA1Q15418 735 aa12.94□□□□□ -0.34
C9orf3-210ENST00000462125 MANEAQ5SRI9 462 aa12.94□□□□□ -0.34
C9orf3-210ENST00000462125 SEL1L2Q5TEA6 688 aa12.94□□□□□ -0.34
C9orf3-210ENST00000462125 ANKS6Q68DC2 871 aa12.94□□□□□ -0.34
C9orf3-210ENST00000462125 CAPRIN2Q6IMN6 1127 aaKnown RBP12.94□□□□□ -0.34
C9orf3-210ENST00000462125 LINC00523Q86TU6 105 aa12.94□□□□□ -0.34
C9orf3-210ENST00000462125 STYXQ8WUJ0 223 aa12.94□□□□□ -0.34
C9orf3-210ENST00000462125 ATG4AQ8WYN0 398 aa12.94□□□□□ -0.34
C9orf3-210ENST00000462125 KLHL6Q8WZ60 621 aa12.94□□□□□ -0.34
C9orf3-210ENST00000462125 CDKN2AIPNLQ96HQ2 116 aa12.94□□□□□ -0.34
C9orf3-210ENST00000462125 INSM2Q96T92 566 aaPredicted RBP12.94□□□□□ -0.34
C9orf3-210ENST00000462125 COPS8Q99627 209 aa12.94□□□□□ -0.34
C9orf3-210ENST00000462125 SIDT1Q9NXL6 827 aaKnown RBP12.94□□□□□ -0.34
C9orf3-210ENST00000462125 ZDHHC3Q9NYG2 299 aa12.94□□□□□ -0.34
C9orf3-210ENST00000462125 SEMA5BQ9P283 1151 aa12.94□□□□□ -0.34
C9orf3-210ENST00000462125 CRLS1Q9UJA2 301 aa12.94□□□□□ -0.34
C9orf3-210ENST00000462125 PILRAQ9UKJ1 303 aa12.94□□□□□ -0.34
C9orf3-210ENST00000462125 C1QL1O75973 258 aa12.93□□□□□ -0.34
C9orf3-210ENST00000462125 SUN1O94901 812 aa12.93□□□□□ -0.34
C9orf3-210ENST00000462125 RALBP11234 206 aa12.93□□□□□ -0.34
C9orf3-210ENST00000462125 WT1P19544 449 aaPredicted RBP12.93□□□□□ -0.34
C9orf3-210ENST00000462125 MC4RP32245 332 aa12.93□□□□□ -0.34
C9orf3-210ENST00000462125 CAPZBP47756 277 aa12.93□□□□□ -0.34
C9orf3-210ENST00000462125 PRLHRP49683 370 aa12.93□□□□□ -0.34
C9orf3-210ENST00000462125 CCNG2Q16589 344 aa12.93□□□□□ -0.34
C9orf3-210ENST00000462125 CEACAM20Q6UY09 585 aa12.93□□□□□ -0.34
C9orf3-210ENST00000462125 DET1Q7L5Y6 550 aa12.93□□□□□ -0.34
C9orf3-210ENST00000462125 PRSS42Q7Z5A4 293 aa12.93□□□□□ -0.34
C9orf3-210ENST00000462125 RSC1A1Q92681 617 aa12.93□□□□□ -0.34
C9orf3-210ENST00000462125 DCUN1D1Q96GG9 259 aa12.93□□□□□ -0.34
C9orf3-210ENST00000462125 ZDHHC12Q96GR4 267 aa12.93□□□□□ -0.34
C9orf3-210ENST00000462125 DNAJC1Q96KC8 554 aaKnown RBP12.93□□□□□ -0.34
C9orf3-210ENST00000462125 TGM7Q96PF1 710 aa12.93□□□□□ -0.34
C9orf3-210ENST00000462125 CCM2Q9BSQ5 444 aa12.93□□□□□ -0.34
C9orf3-210ENST00000462125 ZMYND15Q9H091 742 aa12.93□□□□□ -0.34
C9orf3-210ENST00000462125 ZNF768Q9H5H4 540 aaKnown RBP12.93□□□□□ -0.34
C9orf3-210ENST00000462125 FAM96AQ9H5X1 160 aa12.93□□□□□ -0.34
C9orf3-210ENST00000462125 ETNK1Q9HBU6 452 aa12.93□□□□□ -0.34
C9orf3-210ENST00000462125 KLHL3Q9UH77 587 aa12.93□□□□□ -0.34
C9orf3-210ENST00000462125 PSMD13Q9UNM6 376 aa12.93□□□□□ -0.34
C9orf3-210ENST00000462125 CFAP99D6REC4 459 aa12.92□□□□□ -0.34
C9orf3-210ENST00000462125 CCL22O00626 93 aa12.92□□□□□ -0.34
C9orf3-210ENST00000462125 POLR1CO15160 346 aaPredicted RBP12.92□□□□□ -0.34
C9orf3-210ENST00000462125 CCDC175P0C221 793 aa12.92□□□□□ -0.34
C9orf3-210ENST00000462125 MTHFD1P11586 935 aaKnown RBP12.92□□□□□ -0.34
C9orf3-210ENST00000462125 ACRV1P26436 265 aa12.92□□□□□ -0.34
C9orf3-210ENST00000462125 FDFT1P37268 417 aa12.92□□□□□ -0.34
C9orf3-210ENST00000462125 LEPRP48357 1165 aaKnown RBP12.92□□□□□ -0.34
C9orf3-210ENST00000462125 CDKN1CP49918 316 aaPredicted RBP12.92□□□□□ -0.34
C9orf3-210ENST00000462125 ATP1A2P50993 1020 aa12.92□□□□□ -0.34
C9orf3-210ENST00000462125 POU6F1Q14863 301 aa12.92□□□□□ -0.34
C9orf3-210ENST00000462125 SIX1Q15475 284 aaPredicted RBP12.92□□□□□ -0.34
C9orf3-210ENST00000462125 SKIDA1Q1XH10 827 aa12.92□□□□□ -0.34
C9orf3-210ENST00000462125 ZNF658BQ4V348 819 aaPredicted RBP12.92□□□□□ -0.34
C9orf3-210ENST00000462125 TAF1BQ53T94 588 aaPredicted RBP12.92□□□□□ -0.34
C9orf3-210ENST00000462125 KIAA1614Q5VZ46 1190 aa12.92□□□□□ -0.34
C9orf3-210ENST00000462125 DRICH1Q6PGQ1 229 aaPredicted RBP12.92□□□□□ -0.34
C9orf3-210ENST00000462125 VASH2Q86V25 355 aa12.92□□□□□ -0.34
C9orf3-210ENST00000462125 SERPINA9Q86WD7 417 aa12.92□□□□□ -0.34
C9orf3-210ENST00000462125 CFAP206Q8IYR0 622 aa12.92□□□□□ -0.34
C9orf3-210ENST00000462125 GPR150Q8NGU9 434 aa12.92□□□□□ -0.34
C9orf3-210ENST00000462125 NAT14Q8WUY8 206 aa12.92□□□□□ -0.34
C9orf3-210ENST00000462125 C1orf54Q8WWF1 131 aa12.92□□□□□ -0.34
C9orf3-210ENST00000462125 CTRCQ99895 268 aa12.92□□□□□ -0.34
C9orf3-210ENST00000462125 WWP1Q9H0M0 922 aa12.92□□□□□ -0.34
C9orf3-210ENST00000462125 APMAPQ9HDC9 416 aa12.92□□□□□ -0.34
C9orf3-210ENST00000462125 RIMKLBQ9ULI2 386 aa12.92□□□□□ -0.34
C9orf3-210ENST00000462125 ZNF148Q9UQR1 794 aa12.92□□□□□ -0.34
C9orf3-210ENST00000462125 DRG1Q9Y295 367 aaKnown RBP12.92□□□□□ -0.34
C9orf3-210ENST00000462125 TMEM184BQ9Y519 407 aaPredicted RBP12.92□□□□□ -0.34
C9orf3-210ENST00000462125 PCDHGA4Q9Y5G9 962 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms