RNA–Protein interactions for RNA: ENST00000454852.6

TRAF4-206, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-206ENST00000454852 GLMNQ92990 594 aa11.06□□□□□ -0.64
TRAF4-206ENST00000454852 TLCD1Q96CP7 247 aa11.06□□□□□ -0.64
TRAF4-206ENST00000454852 PDXPQ96GD0 296 aa11.06□□□□□ -0.64
TRAF4-206ENST00000454852 ATXN7L3BQ96GX2 97 aa11.06□□□□□ -0.64
TRAF4-206ENST00000454852 OR2M4Q96R27 311 aa11.06□□□□□ -0.64
TRAF4-206ENST00000454852 GPR21Q99679 349 aa11.06□□□□□ -0.64
TRAF4-206ENST00000454852 DPEP2Q9H4A9 486 aa11.06□□□□□ -0.64
TRAF4-206ENST00000454852 SSU72Q9NP77 194 aaKnown RBP11.06□□□□□ -0.64
TRAF4-206ENST00000454852 MKS1Q9NXB0 559 aa11.06□□□□□ -0.64
TRAF4-206ENST00000454852 TBK1Q9UHD2 729 aa11.06□□□□□ -0.64
TRAF4-206ENST00000454852 TRMT6Q9UJA5 497 aaKnown RBP11.06□□□□□ -0.64
TRAF4-206ENST00000454852 PCOLCE2Q9UKZ9 415 aa11.06□□□□□ -0.64
TRAF4-206ENST00000454852 SLC39A10Q9ULF5 831 aa11.06□□□□□ -0.64
TRAF4-206ENST00000454852 CDYLQ9Y232 598 aa11.06□□□□□ -0.64
TRAF4-206ENST00000454852 CACNA1EQ15878 2313 aa11.06□□□□□ -0.64
TRAF4-206ENST00000454852 PCDH15Q96QU1 1955 aa11.05□□□□□ -0.64
TRAF4-206ENST00000454852 A0A087X1B8 175 aa11.05□□□□□ -0.64
TRAF4-206ENST00000454852 SMIM23A6NLE4 172 aa11.05□□□□□ -0.64
TRAF4-206ENST00000454852 IQCF5A8MTL0 148 aa11.05□□□□□ -0.64
TRAF4-206ENST00000454852 TPP1O14773 563 aa11.05□□□□□ -0.64
TRAF4-206ENST00000454852 DFNA5O60443 496 aa11.05□□□□□ -0.64
TRAF4-206ENST00000454852 TSPAN12O95859 305 aa11.05□□□□□ -0.64
TRAF4-206ENST00000454852 TNFP01375 233 aa11.05□□□□□ -0.64
TRAF4-206ENST00000454852 C2P06681 752 aa11.05□□□□□ -0.64
TRAF4-206ENST00000454852 APOA4P06727 396 aa11.05□□□□□ -0.64
TRAF4-206ENST00000454852 VCLP18206 1134 aa11.05□□□□□ -0.64
TRAF4-206ENST00000454852 KRT15P19012 456 aa11.05□□□□□ -0.64
TRAF4-206ENST00000454852 TYK2P29597 1187 aa11.05□□□□□ -0.64
TRAF4-206ENST00000454852 NBL1P41271 181 aa11.05□□□□□ -0.64
TRAF4-206ENST00000454852 CSNK1EP49674 416 aaKnown RBP11.05□□□□□ -0.64
TRAF4-206ENST00000454852 SLC12A2P55011 1212 aa11.05□□□□□ -0.64
TRAF4-206ENST00000454852 C21orf59P57076 290 aa11.05□□□□□ -0.64
TRAF4-206ENST00000454852 BNC1Q01954 994 aa11.05□□□□□ -0.64
TRAF4-206ENST00000454852 PDAP1Q13442 181 aaKnown RBP11.05□□□□□ -0.64
TRAF4-206ENST00000454852 ZNF423Q2M1K9 1284 aa11.05□□□□□ -0.64
TRAF4-206ENST00000454852 PLA2G2CQ5R387 149 aa11.05□□□□□ -0.64
TRAF4-206ENST00000454852 METRNLQ641Q3 311 aa11.05□□□□□ -0.64
TRAF4-206ENST00000454852 WASH2PQ6VEQ5 465 aa11.05□□□□□ -0.64
TRAF4-206ENST00000454852 OTOAQ7RTW8 1153 aa11.05□□□□□ -0.64
TRAF4-206ENST00000454852 CMC1Q7Z7K0 106 aa11.05□□□□□ -0.64
TRAF4-206ENST00000454852 RASGRP3Q8IV61 690 aa11.05□□□□□ -0.64
TRAF4-206ENST00000454852 PHACTR4Q8IZ21 702 aa11.05□□□□□ -0.64
TRAF4-206ENST00000454852 SLC22A15Q8IZD6 547 aa11.05□□□□□ -0.64
TRAF4-206ENST00000454852 KRT222Q8N1A0 295 aa11.05□□□□□ -0.64
TRAF4-206ENST00000454852 NKAPQ8N5F7 415 aaKnown RBP11.05□□□□□ -0.64
TRAF4-206ENST00000454852 BEND7Q8N7W2 519 aaPredicted RBP11.05□□□□□ -0.64
TRAF4-206ENST00000454852 SUMF1Q8NBK3 374 aa11.05□□□□□ -0.64
TRAF4-206ENST00000454852 GPBAR1Q8TDU6 330 aa11.05□□□□□ -0.64
TRAF4-206ENST00000454852 PIGKQ92643 395 aa11.05□□□□□ -0.64
TRAF4-206ENST00000454852 ALKBH8Q96BT7 664 aaKnown RBP11.05□□□□□ -0.64
TRAF4-206ENST00000454852 SLC30A3Q99726 388 aa11.05□□□□□ -0.64
TRAF4-206ENST00000454852 ZDHHC5Q9C0B5 715 aa11.05□□□□□ -0.64
TRAF4-206ENST00000454852 COG4Q9H9E3 785 aa11.05□□□□□ -0.64
TRAF4-206ENST00000454852 CAB39LQ9H9S4 337 aa11.05□□□□□ -0.64
TRAF4-206ENST00000454852 CARS2Q9HA77 564 aaKnown RBP11.05□□□□□ -0.64
TRAF4-206ENST00000454852 GPAMQ9HCL2 828 aa11.05□□□□□ -0.64
TRAF4-206ENST00000454852 CYP4F12Q9HCS2 524 aa11.05□□□□□ -0.64
TRAF4-206ENST00000454852 MRPL40Q9NQ50 206 aaKnown RBP11.05□□□□□ -0.64
TRAF4-206ENST00000454852 WASH6PQ9NQA3 447 aa11.05□□□□□ -0.64
TRAF4-206ENST00000454852 GALPQ9UBC7 116 aa11.05□□□□□ -0.64
TRAF4-206ENST00000454852 SLC23A2Q9UGH3 650 aa11.05□□□□□ -0.64
TRAF4-206ENST00000454852 KLF15Q9UIH9 416 aa11.05□□□□□ -0.64
TRAF4-206ENST00000454852 ACSL5Q9ULC5 683 aa11.05□□□□□ -0.64
TRAF4-206ENST00000454852 SLC6A14Q9UN76 642 aa11.05□□□□□ -0.64
TRAF4-206ENST00000454852 ANKRD6Q9Y2G4 727 aa11.05□□□□□ -0.64
TRAF4-206ENST00000454852 ACOT9Q9Y305 439 aa11.05□□□□□ -0.64
TRAF4-206ENST00000454852 R4GN57 208 aa11.05□□□□□ -0.64
TRAF4-206ENST00000454852 CACNA1HO95180 2353 aa11.05□□□□□ -0.64
TRAF4-206ENST00000454852 TP53BP1Q12888 1972 aaPredicted RBP11.05□□□□□ -0.64
TRAF4-206ENST00000454852 A0A096LPK6 155 aa11.04□□□□□ -0.64
TRAF4-206ENST00000454852 A0A1W2PPM1 405 aa11.04□□□□□ -0.64
TRAF4-206ENST00000454852 YKT6O15498 198 aa11.04□□□□□ -0.64
TRAF4-206ENST00000454852 TRIM16O95361 564 aa11.04□□□□□ -0.64
TRAF4-206ENST00000454852 SYF2O95926 243 aaKnown RBP11.04□□□□□ -0.64
TRAF4-206ENST00000454852 MT-ND3P03897 115 aa11.04□□□□□ -0.64
TRAF4-206ENST00000454852 GSTA1P08263 222 aa11.04□□□□□ -0.64
TRAF4-206ENST00000454852 MPC1LP0DKB6 136 aa11.04□□□□□ -0.64
TRAF4-206ENST00000454852 DGKAP23743 735 aa11.04□□□□□ -0.64
TRAF4-206ENST00000454852 MAPK9P45984 424 aa11.04□□□□□ -0.64
TRAF4-206ENST00000454852 GNPDA1P46926 289 aa11.04□□□□□ -0.64
TRAF4-206ENST00000454852 SLC18A1P54219 525 aa11.04□□□□□ -0.64
TRAF4-206ENST00000454852 HNRNPKP61978 463 aaKnown RBP eCLIP11.04□□□□□ -0.64
TRAF4-206ENST00000454852 INSCQ1MX18 579 aa11.04□□□□□ -0.64
TRAF4-206ENST00000454852 KIF19Q2TAC6 998 aa11.04□□□□□ -0.64
TRAF4-206ENST00000454852 TAF1BQ53T94 588 aaPredicted RBP11.04□□□□□ -0.64
TRAF4-206ENST00000454852 AGAP9Q5VTM2 703 aa11.04□□□□□ -0.64
TRAF4-206ENST00000454852 PAQR3Q6TCH7 311 aa11.04□□□□□ -0.64
TRAF4-206ENST00000454852 CRTC3Q6UUV7 619 aa11.04□□□□□ -0.64
TRAF4-206ENST00000454852 IL27RAQ6UWB1 636 aa11.04□□□□□ -0.64
TRAF4-206ENST00000454852 TMEM207Q6UWW9 146 aa11.04□□□□□ -0.64
TRAF4-206ENST00000454852 PRR23BQ6ZRT6 265 aa11.04□□□□□ -0.64
TRAF4-206ENST00000454852 PIM3Q86V86 326 aa11.04□□□□□ -0.64
TRAF4-206ENST00000454852 FSTL5Q8N475 847 aaPredicted RBP11.04□□□□□ -0.64
TRAF4-206ENST00000454852 SIDT2Q8NBJ9 832 aaKnown RBP11.04□□□□□ -0.64
TRAF4-206ENST00000454852 NAT14Q8WUY8 206 aa11.04□□□□□ -0.64
TRAF4-206ENST00000454852 ELMO1Q92556 727 aa11.04□□□□□ -0.64
TRAF4-206ENST00000454852 TSACCQ96A04 125 aaPredicted RBP11.04□□□□□ -0.64
TRAF4-206ENST00000454852 ATP6V1G3Q96LB4 118 aa11.04□□□□□ -0.64
TRAF4-206ENST00000454852 DERL2Q9GZP9 239 aa11.04□□□□□ -0.64
TRAF4-206ENST00000454852 OR52A5Q9H2C5 316 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms