RNA–Protein interactions for RNA: ENST00000449971.5

FAM3A-216, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 1,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-216ENST00000449971 ZNF148Q9UQR1 794 aa17.22■□□□□ 0.35
FAM3A-216ENST00000449971 USP9YO00507 2555 aaPredicted RBP17.22■□□□□ 0.35
FAM3A-216ENST00000449971 OR2AG2A6NM03 316 aa17.21■□□□□ 0.35
FAM3A-216ENST00000449971 DUX1O43812 170 aa17.21■□□□□ 0.35
FAM3A-216ENST00000449971 RAD1O60671 282 aa17.21■□□□□ 0.35
FAM3A-216ENST00000449971 POP7O75817 140 aaKnown RBP17.21■□□□□ 0.35
FAM3A-216ENST00000449971 SRP72O76094 671 aaKnown RBP17.21■□□□□ 0.35
FAM3A-216ENST00000449971 IFNB1P01574 187 aa17.21■□□□□ 0.35
FAM3A-216ENST00000449971 MSH3P20585 1137 aa17.21■□□□□ 0.35
FAM3A-216ENST00000449971 RPL10P27635 214 aaKnown RBP17.21■□□□□ 0.35
FAM3A-216ENST00000449971 CSTF2P33240 577 aaKnown RBP eCLIP17.21■□□□□ 0.35
FAM3A-216ENST00000449971 LIMK2P53671 638 aa17.21■□□□□ 0.35
FAM3A-216ENST00000449971 DRG2P55039 364 aaKnown RBP17.21■□□□□ 0.35
FAM3A-216ENST00000449971 CCZ1BP86790 482 aa17.21■□□□□ 0.35
FAM3A-216ENST00000449971 CCZ1P86791 482 aaPredicted RBP17.21■□□□□ 0.35
FAM3A-216ENST00000449971 TMEM71Q6P5X7 295 aa17.21■□□□□ 0.35
FAM3A-216ENST00000449971 ZNF662Q6ZS27 426 aa17.21■□□□□ 0.35
FAM3A-216ENST00000449971 TRIM48Q8IWZ4 208 aa17.21■□□□□ 0.35
FAM3A-216ENST00000449971 UNC5BQ8IZJ1 945 aa17.21■□□□□ 0.35
FAM3A-216ENST00000449971 AVL9Q8NBF6 648 aa17.21■□□□□ 0.35
FAM3A-216ENST00000449971 OR4D9Q8NGE8 314 aa17.21■□□□□ 0.35
FAM3A-216ENST00000449971 NCSTNQ92542 709 aa17.21■□□□□ 0.35
FAM3A-216ENST00000449971 DPYSL5Q9BPU6 564 aa17.21■□□□□ 0.35
FAM3A-216ENST00000449971 LRRC4CQ9HCJ2 640 aa17.21■□□□□ 0.35
FAM3A-216ENST00000449971 TMEM9Q9P0T7 183 aa17.21■□□□□ 0.35
FAM3A-216ENST00000449971 SPTBN1Q01082 2364 aaKnown RBP17.2■□□□□ 0.34
FAM3A-216ENST00000449971 HGSO14964 777 aaPredicted RBP17.2■□□□□ 0.34
FAM3A-216ENST00000449971 VIPP01282 170 aa17.2■□□□□ 0.34
FAM3A-216ENST00000449971 XRCC1P18887 633 aaPredicted RBP17.2■□□□□ 0.34
FAM3A-216ENST00000449971 CSF2RBP32927 897 aa17.2■□□□□ 0.34
FAM3A-216ENST00000449971 SLC19A1P41440 591 aa17.2■□□□□ 0.34
FAM3A-216ENST00000449971 CTSCP53634 463 aa17.2■□□□□ 0.34
FAM3A-216ENST00000449971 TRA2AQ13595 282 aaKnown RBP eCLIP17.2■□□□□ 0.34
FAM3A-216ENST00000449971 SEPT6Q14141 434 aa17.2■□□□□ 0.34
FAM3A-216ENST00000449971 LONRF2Q1L5Z9 754 aa17.2■□□□□ 0.34
FAM3A-216ENST00000449971 DEFB109BQ30KR1 87 aa17.2■□□□□ 0.34
FAM3A-216ENST00000449971 DET1Q7L5Y6 550 aa17.2■□□□□ 0.34
FAM3A-216ENST00000449971 C11orf96Q7Z7L8 435 aa17.2■□□□□ 0.34
FAM3A-216ENST00000449971 AMZ2Q86W34 360 aa17.2■□□□□ 0.34
FAM3A-216ENST00000449971 RTP4Q96DX8 246 aa17.2■□□□□ 0.34
FAM3A-216ENST00000449971 TBC1D10AQ9BXI6 508 aa17.2■□□□□ 0.34
FAM3A-216ENST00000449971 FAM96AQ9H5X1 160 aa17.2■□□□□ 0.34
FAM3A-216ENST00000449971 GPN2Q9H9Y4 310 aaPredicted RBP17.2■□□□□ 0.34
FAM3A-216ENST00000449971 SMOXQ9NWM0 555 aa17.2■□□□□ 0.34
FAM3A-216ENST00000449971 PIH1D1Q9NWS0 290 aaKnown RBP17.2■□□□□ 0.34
FAM3A-216ENST00000449971 OCIAD1Q9NX40 245 aa17.2■□□□□ 0.34
FAM3A-216ENST00000449971 ZNF624Q9P2J8 865 aaPredicted RBP17.2■□□□□ 0.34
FAM3A-216ENST00000449971 CRLS1Q9UJA2 301 aa17.2■□□□□ 0.34
FAM3A-216ENST00000449971 EFCAB7A8K855 629 aa17.19■□□□□ 0.34
FAM3A-216ENST00000449971 A8MU76 341 aa17.19■□□□□ 0.34
FAM3A-216ENST00000449971 CCL22O00626 93 aa17.19■□□□□ 0.34
FAM3A-216ENST00000449971 LDB2O43679 373 aa17.19■□□□□ 0.34
FAM3A-216ENST00000449971 KCNJ13O60928 360 aa17.19■□□□□ 0.34
FAM3A-216ENST00000449971 AP2A1O95782 977 aa17.19■□□□□ 0.34
FAM3A-216ENST00000449971 PBLDP30039 288 aaPredicted RBP17.19■□□□□ 0.34
FAM3A-216ENST00000449971 HADHAP40939 763 aa17.19■□□□□ 0.34
FAM3A-216ENST00000449971 LMAN1P49257 510 aa17.19■□□□□ 0.34
FAM3A-216ENST00000449971 ZNF140P52738 457 aaPredicted RBP17.19■□□□□ 0.34
FAM3A-216ENST00000449971 UBE2IP63279 158 aaKnown RBP17.19■□□□□ 0.34
FAM3A-216ENST00000449971 XIAPP98170 497 aa17.19■□□□□ 0.34
FAM3A-216ENST00000449971 OASLQ15646 514 aaKnown RBP17.19■□□□□ 0.34
FAM3A-216ENST00000449971 SNAP47Q5SQN1 464 aa17.19■□□□□ 0.34
FAM3A-216ENST00000449971 FNBP1LQ5T0N5 605 aa17.19■□□□□ 0.34
FAM3A-216ENST00000449971 ANKS6Q68DC2 871 aa17.19■□□□□ 0.34
FAM3A-216ENST00000449971 C16orf46Q6P387 395 aa17.19■□□□□ 0.34
FAM3A-216ENST00000449971 ABRAXAS1Q6UWZ7 409 aa17.19■□□□□ 0.34
FAM3A-216ENST00000449971 WASH2PQ6VEQ5 465 aa17.19■□□□□ 0.34
FAM3A-216ENST00000449971 AGBL5Q8NDL9 886 aa17.19■□□□□ 0.34
FAM3A-216ENST00000449971 TRIM58Q8NG06 486 aa17.19■□□□□ 0.34
FAM3A-216ENST00000449971 CXorf40BQ96DE9 158 aa17.19■□□□□ 0.34
FAM3A-216ENST00000449971 RNF31Q96EP0 1072 aa17.19■□□□□ 0.34
FAM3A-216ENST00000449971 DCUN1D1Q96GG9 259 aa17.19■□□□□ 0.34
FAM3A-216ENST00000449971 CATSPER2Q96P56 530 aa17.19■□□□□ 0.34
FAM3A-216ENST00000449971 B3GNT4Q9C0J1 378 aa17.19■□□□□ 0.34
FAM3A-216ENST00000449971 ETNK1Q9HBU6 452 aa17.19■□□□□ 0.34
FAM3A-216ENST00000449971 WASH6PQ9NQA3 447 aa17.19■□□□□ 0.34
FAM3A-216ENST00000449971 TUBD1Q9UJT1 453 aa17.19■□□□□ 0.34
FAM3A-216ENST00000449971 PPP2R2CQ9Y2T4 447 aa17.19■□□□□ 0.34
FAM3A-216ENST00000449971 DNMT3AQ9Y6K1 912 aaPredicted RBP17.19■□□□□ 0.34
FAM3A-216ENST00000449971 SLC30A1Q9Y6M5 507 aa17.19■□□□□ 0.34
FAM3A-216ENST00000449971 ICE1Q9Y2F5 2266 aa17.18■□□□□ 0.34
FAM3A-216ENST00000449971 PRR19A6NJB7 356 aa17.18■□□□□ 0.34
FAM3A-216ENST00000449971 OR52A4PA6NMU1 304 aa17.18■□□□□ 0.34
FAM3A-216ENST00000449971 E7EVH7 732 aa17.18■□□□□ 0.34
FAM3A-216ENST00000449971 THRAP10827 490 aa17.18■□□□□ 0.34
FAM3A-216ENST00000449971 ETS1P14921 441 aa17.18■□□□□ 0.34
FAM3A-216ENST00000449971 BRAFP15056 766 aa17.18■□□□□ 0.34
FAM3A-216ENST00000449971 NR1D1P20393 614 aa17.18■□□□□ 0.34
FAM3A-216ENST00000449971 ITGALP20701 1170 aa17.18■□□□□ 0.34
FAM3A-216ENST00000449971 HALP42357 657 aa17.18■□□□□ 0.34
FAM3A-216ENST00000449971 EPHA4P54764 986 aa17.18■□□□□ 0.34
FAM3A-216ENST00000449971 POU6F1Q14863 301 aa17.18■□□□□ 0.34
FAM3A-216ENST00000449971 ATP1A1-AS1Q5TC04 95 aa17.18■□□□□ 0.34
FAM3A-216ENST00000449971 AGAP9Q5VTM2 703 aa17.18■□□□□ 0.34
FAM3A-216ENST00000449971 WDR74Q6RFH5 385 aaPredicted RBP17.18■□□□□ 0.34
FAM3A-216ENST00000449971 TMEM26Q6ZUK4 368 aa17.18■□□□□ 0.34
FAM3A-216ENST00000449971 PRUNE1Q86TP1 453 aa17.18■□□□□ 0.34
FAM3A-216ENST00000449971 LINC00523Q86TU6 105 aa17.18■□□□□ 0.34
FAM3A-216ENST00000449971 BEND7Q8N7W2 519 aaPredicted RBP17.18■□□□□ 0.34
FAM3A-216ENST00000449971 NAT14Q8WUY8 206 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms